Gene annotation
Transcriptome id Sobic.002G254650.1
Synonym -
Functional annotation -
UniProt A0A1W0W5T7
Pfam -
Panther DB PTHR37749 PTHR37749:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16695 : -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G352900 expressed protein -
2 Sobic.008G132800 expressed protein -
3 Sobic.010G065400 X0001, putative, expressed -
4 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
5 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
6 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
7 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
8 Sobic.010G099200 viral-response family protein, expressed -
9 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
10 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
11 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
12 Sobic.008G127500 expressed protein -
13 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
14 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
15 Sobic.006G220700 signal recognition particle 14 kDa protein, putative, expressed K03104: signal recognition particle subunit SRP14
16 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
17 Sobic.007G019501 - K13448: calcium-binding protein CML
18 Sobic.003G367900 LSM domain containing protein, expressed K12622: U6 snRNA-associated Sm-like protein LSm3
19 Sobic.005G092800 expressed protein -
20 Sobic.004G113700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K13127: RNF113A, RING finger protein 113A


Gene co-expression network
sample Sobic002G254650 Sobic002G254650 Sobic004G352900 Sobic004G352900 Sobic002G254650--Sobic004G352900 Sobic008G132800 Sobic008G132800 Sobic002G254650--Sobic008G132800 Sobic010G065400 Sobic010G065400 Sobic002G254650--Sobic010G065400 Sobic004G012800 Sobic004G012800 Sobic002G254650--Sobic004G012800 Sobic010G054200 Sobic010G054200 Sobic002G254650--Sobic010G054200 Sobic010G029400 Sobic010G029400 Sobic002G254650--Sobic010G029400 Sobic005G157200 Sobic005G157200 Sobic002G254650--Sobic005G157200 Sobic010G099200 Sobic010G099200 Sobic002G254650--Sobic010G099200 Sobic006G052400 Sobic006G052400 Sobic002G254650--Sobic006G052400 Sobic002G427900 Sobic002G427900 Sobic004G352900--Sobic002G427900 Sobic009G156300 Sobic009G156300 Sobic004G352900--Sobic009G156300 Sobic004G014000 Sobic004G014000 Sobic004G352900--Sobic004G014000 Sobic010G066300 Sobic010G066300 Sobic004G352900--Sobic010G066300 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic002G117200 Sobic002G117200 Sobic004G352900--Sobic002G117200 Sobic004G352900--Sobic010G029400 Sobic009G131100 Sobic009G131100 Sobic004G352900--Sobic009G131100 Sobic008G132800--Sobic010G029400 Sobic002G078400 Sobic002G078400 Sobic008G132800--Sobic002G078400 Sobic009G016201 Sobic009G016201 Sobic008G132800--Sobic009G016201 Sobic001G331900 Sobic001G331900 Sobic008G132800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic008G132800--Sobic004G066800 Sobic001G105100 Sobic001G105100 Sobic008G132800--Sobic001G105100 Sobic008G132800--Sobic005G157200 Sobic008G132800--Sobic010G065400 Sobic003G217100 Sobic003G217100 Sobic008G132800--Sobic003G217100 Sobic010G065400--Sobic002G078400 Sobic008G127500 Sobic008G127500 Sobic010G065400--Sobic008G127500 Sobic010G065400--Sobic008G132800 Sobic001G502200 Sobic001G502200 Sobic010G065400--Sobic001G502200 Sobic001G315500 Sobic001G315500 Sobic010G065400--Sobic001G315500 Sobic004G196300 Sobic004G196300 Sobic010G065400--Sobic004G196300 Sobic003G362400 Sobic003G362400 Sobic010G065400--Sobic003G362400 Sobic005G111100 Sobic005G111100 Sobic010G065400--Sobic005G111100 Sobic009G198500 Sobic009G198500 Sobic010G065400--Sobic009G198500 Sobic004G137900 Sobic004G137900 Sobic004G012800--Sobic004G137900 Sobic006G231500 Sobic006G231500 Sobic004G012800--Sobic006G231500 Sobic006G231700 Sobic006G231700 Sobic004G012800--Sobic006G231700 Sobic009G001900 Sobic009G001900 Sobic004G012800--Sobic009G001900 Sobic004G012800--Sobic002G254650 Sobic004G012800--Sobic005G111100 Sobic003G358300 Sobic003G358300 Sobic004G012800--Sobic003G358300 Sobic006G094600 Sobic006G094600 Sobic004G012800--Sobic006G094600 Sobic001G532100 Sobic001G532100 Sobic004G012800--Sobic001G532100 Sobic006G081100 Sobic006G081100 Sobic010G054200--Sobic006G081100 Sobic003G249700 Sobic003G249700 Sobic010G054200--Sobic003G249700 Sobic001G058900 Sobic001G058900 Sobic010G054200--Sobic001G058900 Sobic009G223300 Sobic009G223300 Sobic010G054200--Sobic009G223300 Sobic003G129800 Sobic003G129800 Sobic010G054200--Sobic003G129800 Sobic001G225700 Sobic001G225700 Sobic010G054200--Sobic001G225700 Sobic009G233400 Sobic009G233400 Sobic010G054200--Sobic009G233400 Sobic003G150000 Sobic003G150000 Sobic010G054200--Sobic003G150000 Sobic002G372400 Sobic002G372400 Sobic010G054200--Sobic002G372400 Sobic010G029400--Sobic008G132800 Sobic010G029400--Sobic002G078400 Sobic003G025200 Sobic003G025200 Sobic010G029400--Sobic003G025200 Sobic002G406500 Sobic002G406500 Sobic010G029400--Sobic002G406500 Sobic002G115000 Sobic002G115000 Sobic010G029400--Sobic002G115000 Sobic010G029400--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic010G029400--Sobic008G058300 Sobic001G377800 Sobic001G377800 Sobic010G029400--Sobic001G377800 Sobic010G029400--Sobic009G016201 Sobic005G157200--Sobic008G058300 Sobic005G157200--Sobic001G331900 Sobic005G157200--Sobic001G377800 Sobic005G157200--Sobic003G025200 Sobic005G157200--Sobic002G406500 Sobic007G163700 Sobic007G163700 Sobic005G157200--Sobic007G163700 Sobic005G157200--Sobic010G029400 Sobic004G107600 Sobic004G107600 Sobic005G157200--Sobic004G107600 Sobic001G529000 Sobic001G529000 Sobic005G157200--Sobic001G529000 Sobic010G099200--Sobic002G254650 Sobic010G099200--Sobic009G156300 Sobic010G099200--Sobic004G352900 Sobic001G237500 Sobic001G237500 Sobic010G099200--Sobic001G237500 Sobic006G257001 Sobic006G257001 Sobic010G099200--Sobic006G257001 Sobic010G099200--Sobic003G217100 Sobic010G099200--Sobic008G132800 Sobic005G010500 Sobic005G010500 Sobic010G099200--Sobic005G010500 Sobic001G408100 Sobic001G408100 Sobic010G099200--Sobic001G408100 Sobic006G052400--Sobic008G058300 Sobic006G052400--Sobic001G058900 Sobic009G050200 Sobic009G050200 Sobic006G052400--Sobic009G050200 Sobic001G096100 Sobic001G096100 Sobic006G052400--Sobic001G096100 Sobic006G115000 Sobic006G115000 Sobic006G052400--Sobic006G115000 Sobic006G052400--Sobic001G225700 Sobic003G442400 Sobic003G442400 Sobic006G052400--Sobic003G442400 Sobic003G018600 Sobic003G018600 Sobic006G052400--Sobic003G018600 Sobic009G117000 Sobic009G117000 Sobic006G052400--Sobic009G117000
Octagon: transcription factors


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