Gene annotation
Transcriptome id Sobic.005G157200.1
Synonym PDF2, Sb05g021970
Functional annotation prefoldin subunit, putative, expressed
UniProt C5Y4T1
Pfam PF01920
Panther DB PTHR13303
NCBI CDD KOG4098; Molecular chaperone Prefoldin, subunit 2
KEGG Orthology K09549; prefoldin subunit 2
Gene Ontology GO:0016272; prefoldin complex GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT3G22480 : prefoldin 2
RAP-DB (Rice) LOC_Os11g36050.1 : prefoldin subunit, putative, expressed
MaizeGDB (Corn) Zm00025a015774 , Zm00025a055167
Brachypodium KQJ88174
Barley HORVU7Hr1G008000.1 , HORVU2Hr1G104510.1 , HORVU2Hr1G104510.2
Wheat -
Populus -


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cDNA sequences
Sobic.005G157200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
2 Sobic.001G331900 expressed protein -
3 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
4 Sobic.003G025200 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
5 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
6 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
7 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
8 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
9 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
10 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
11 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
12 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
13 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
14 Sobic.008G132800 expressed protein -
15 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
16 Sobic.003G280700 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
17 Sobic.009G008600 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
18 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
19 Sobic.006G081100 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
20 Sobic.005G092800 expressed protein -


Gene co-expression network
sample Sobic005G157200 Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic005G157200--Sobic008G058300 Sobic001G331900 Sobic001G331900 Sobic005G157200--Sobic001G331900 Sobic001G377800 Sobic001G377800 Sobic005G157200--Sobic001G377800 Sobic003G025200 Sobic003G025200 Sobic005G157200--Sobic003G025200 Sobic002G406500 Sobic002G406500 Sobic005G157200--Sobic002G406500 Sobic007G163700 Sobic007G163700 Sobic005G157200--Sobic007G163700 Sobic010G029400 Sobic010G029400 Sobic005G157200--Sobic010G029400 Sobic004G107600 Sobic004G107600 Sobic005G157200--Sobic004G107600 Sobic001G529000 Sobic001G529000 Sobic005G157200--Sobic001G529000 Sobic008G058300--Sobic005G157200 Sobic008G058300--Sobic003G025200 Sobic008G058300--Sobic001G331900 Sobic006G052400 Sobic006G052400 Sobic008G058300--Sobic006G052400 Sobic004G300900 Sobic004G300900 Sobic008G058300--Sobic004G300900 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic008G058300--Sobic001G377800 Sobic001G331900--Sobic004G107600 Sobic001G331900--Sobic005G157200 Sobic001G331900--Sobic008G058300 Sobic001G331900--Sobic002G078400 Sobic008G132800 Sobic008G132800 Sobic001G331900--Sobic008G132800 Sobic001G331900--Sobic004G300900 Sobic001G331900--Sobic001G377800 Sobic003G362400 Sobic003G362400 Sobic001G331900--Sobic003G362400 Sobic001G331900--Sobic001G529000 Sobic001G377800--Sobic002G406500 Sobic004G104100 Sobic004G104100 Sobic001G377800--Sobic004G104100 Sobic001G085400 Sobic001G085400 Sobic001G377800--Sobic001G085400 Sobic001G091801 Sobic001G091801 Sobic001G377800--Sobic001G091801 Sobic007G019000 Sobic007G019000 Sobic001G377800--Sobic007G019000 Sobic006G221200 Sobic006G221200 Sobic001G377800--Sobic006G221200 Sobic006G081100 Sobic006G081100 Sobic001G377800--Sobic006G081100 Sobic002G049300 Sobic002G049300 Sobic001G377800--Sobic002G049300 Sobic009G050300 Sobic009G050300 Sobic001G377800--Sobic009G050300 Sobic003G025200--Sobic001G377800 Sobic003G025200--Sobic006G081100 Sobic003G025200--Sobic001G085400 Sobic003G025200--Sobic002G406500 Sobic001G058900 Sobic001G058900 Sobic003G025200--Sobic001G058900 Sobic006G201500 Sobic006G201500 Sobic003G025200--Sobic006G201500 Sobic003G025200--Sobic002G049300 Sobic003G025200--Sobic008G058300 Sobic002G115000 Sobic002G115000 Sobic003G025200--Sobic002G115000 Sobic002G406500--Sobic001G085400 Sobic002G406500--Sobic001G377800 Sobic001G436200 Sobic001G436200 Sobic002G406500--Sobic001G436200 Sobic002G056200 Sobic002G056200 Sobic002G406500--Sobic002G056200 Sobic006G138100 Sobic006G138100 Sobic002G406500--Sobic006G138100 Sobic002G406500--Sobic002G115000 Sobic002G406500--Sobic002G049300 Sobic002G047600 Sobic002G047600 Sobic002G406500--Sobic002G047600 Sobic002G304900 Sobic002G304900 Sobic002G406500--Sobic002G304900 Sobic006G231700 Sobic006G231700 Sobic007G163700--Sobic006G231700 Sobic001G517600 Sobic001G517600 Sobic007G163700--Sobic001G517600 Sobic007G163700--Sobic005G157200 Sobic010G267900 Sobic010G267900 Sobic007G163700--Sobic010G267900 Sobic007G163700--Sobic001G529000 Sobic001G128400 Sobic001G128400 Sobic007G163700--Sobic001G128400 Sobic007G163700--Sobic003G362400 Sobic002G373800 Sobic002G373800 Sobic007G163700--Sobic002G373800 Sobic003G018600 Sobic003G018600 Sobic007G163700--Sobic003G018600 Sobic010G029400--Sobic008G132800 Sobic010G029400--Sobic002G078400 Sobic010G029400--Sobic003G025200 Sobic010G029400--Sobic002G406500 Sobic010G029400--Sobic002G115000 Sobic010G029400--Sobic005G157200 Sobic010G029400--Sobic008G058300 Sobic010G029400--Sobic001G377800 Sobic009G016201 Sobic009G016201 Sobic010G029400--Sobic009G016201 Sobic004G107600--Sobic001G331900 Sobic004G107600--Sobic003G362400 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic005G092800 Sobic005G092800 Sobic004G107600--Sobic005G092800 Sobic004G107600--Sobic005G157200 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic001G445800 Sobic001G445800 Sobic004G107600--Sobic001G445800 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G529000--Sobic001G331900 Sobic001G529000--Sobic005G157200 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic001G529000--Sobic004G300900
Octagon: transcription factors


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