Gene annotation
Transcriptome id Sobic.002G078400.1
Synonym ARF1A1C, Sb02g006540
Functional annotation ADP-ribosylation factor, putative, expressed
UniProt C5XDD0
Pfam PF09439
Panther DB PTHR11711 PTHR11711:SF181
NCBI CDD KOG0070; GTP-binding ADP-ribosylation factor Arf1
KEGG Orthology K07937; ADP-ribosylation factor 1/2 K07977Arf/Sar family, other
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47170 : Ras-related small GTP-binding family protein
RAP-DB (Rice) LOC_Os07g12170.1 : ADP-ribosylation factor, putative, expressed
MaizeGDB (Corn) Zm00025a031636 , Zm00025a044059 , Zm00025a016469 , Zm00025a035278 , Zm00025a027123 , Zm00025a013401 , Zm00025a045417 , Zm00025a039804
Brachypodium PNT73921 , PNT73073 , KQK12518 , KQJ92478 , KQK20331 , KQK20330 , KQK20333 , KQK20332 , KQK20335 , KQK10268 , KQK10269
Barley HORVU2Hr1G054760.1 , HORVU2Hr1G054760.2 , HORVU2Hr1G054760.3 , HORVU2Hr1G054760.4 , HORVU1Hr1G068790.8 , HORVU1Hr1G068790.3 , HORVU1Hr1G068790.5 , HORVU1Hr1G068790.4 , HORVU1Hr1G068790.7 , HORVU1Hr1G068790.6 , HORVU5Hr1G111500.3 , HORVU5Hr1G111500.2 , HORVU5Hr1G111500.1 , HORVU5Hr1G111500.5 , HORVU5Hr1G111500.4 , HORVU3Hr1G079700.2 , HORVU3Hr1G079700.3 , HORVU3Hr1G079700.1 , HORVU3Hr1G079700.6 , HORVU3Hr1G079700.7 , HORVU3Hr1G079700.4 , HORVU3Hr1G079700.5 , HORVU3Hr1G079700.8 , HORVU5Hr1G045440.4 , HORVU5Hr1G045440.5 , HORVU5Hr1G045440.6 , HORVU5Hr1G045440.1 , HORVU5Hr1G045440.2 , HORVU5Hr1G045440.3 , HORVU0Hr1G027130.5 , HORVU0Hr1G027130.4 , HORVU0Hr1G027130.6 , HORVU0Hr1G027130.1 , HORVU0Hr1G027130.3 , HORVU0Hr1G027130.2 , HORVU1Hr1G068790.2 , HORVU2Hr1G054780.4 , HORVU2Hr1G054780.5 , HORVU2Hr1G054780.2 , HORVU2Hr1G054780.3 , HORVU2Hr1G054780.1 , HORVU1Hr1G068790.1
Wheat TraesCS2D02G244900 , TraesCS2D02G244900 , TraesCS3A02G337300 , TraesCS3A02G337300 , TraesCS1B02G317000 , TraesCS3D02G330500 , TraesCS3D02G330500 , TraesCS5A02G467400 , TraesCS1A02G306200 , TraesCS5A02G142100 , TraesCS5B02G140900 , TraesCS5D02G150000 , TraesCS5D02G150000 , TraesCS2A02G235500 , TraesCS5D02G480200 , TraesCS5B02G479100 , TraesCS1D02G305900 , TraesCS3B02G368600 , TraesCS3B02G368600
Populus -


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cDNA sequences
Sobic.002G078400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
2 Sobic.010G065400 X0001, putative, expressed -
3 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
4 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
5 Sobic.008G132800 expressed protein -
6 Sobic.001G445800 expressed protein -
7 Sobic.001G331900 expressed protein -
8 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
9 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
10 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
11 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
12 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
13 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
14 Sobic.007G195701 - -
15 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
16 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
17 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
18 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
19 Sobic.009G168000 selT-like protein precursor, putative, expressed -
20 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G078400 Sobic002G078400 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic004G300900--Sobic002G078400 Sobic006G141500 Sobic006G141500 Sobic004G300900--Sobic006G141500 Sobic004G300900--Sobic009G198500 Sobic004G300900--Sobic001G331900 Sobic001G005900 Sobic001G005900 Sobic004G300900--Sobic001G005900 Sobic004G225500 Sobic004G225500 Sobic004G300900--Sobic004G225500 Sobic008G058300 Sobic008G058300 Sobic004G300900--Sobic008G058300 Sobic003G115800 Sobic003G115800 Sobic004G300900--Sobic003G115800 Sobic004G300900--Sobic001G445800 Sobic010G065400--Sobic002G078400 Sobic008G127500 Sobic008G127500 Sobic010G065400--Sobic008G127500 Sobic010G065400--Sobic008G132800 Sobic001G502200 Sobic001G502200 Sobic010G065400--Sobic001G502200 Sobic001G315500 Sobic001G315500 Sobic010G065400--Sobic001G315500 Sobic004G196300 Sobic004G196300 Sobic010G065400--Sobic004G196300 Sobic010G065400--Sobic003G362400 Sobic005G111100 Sobic005G111100 Sobic010G065400--Sobic005G111100 Sobic010G065400--Sobic009G198500 Sobic003G362400--Sobic002G078400 Sobic004G107600 Sobic004G107600 Sobic003G362400--Sobic004G107600 Sobic001G529000 Sobic001G529000 Sobic003G362400--Sobic001G529000 Sobic003G362400--Sobic007G091000 Sobic003G362400--Sobic005G111100 Sobic002G116200 Sobic002G116200 Sobic003G362400--Sobic002G116200 Sobic003G362400--Sobic001G331900 Sobic010G213400 Sobic010G213400 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic007G091000--Sobic002G078400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic003G305100 Sobic003G305100 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic001G025600 Sobic001G025600 Sobic007G091000--Sobic001G025600 Sobic003G277000 Sobic003G277000 Sobic007G091000--Sobic003G277000 Sobic008G132800--Sobic010G029400 Sobic008G132800--Sobic002G078400 Sobic009G016201 Sobic009G016201 Sobic008G132800--Sobic009G016201 Sobic008G132800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic008G132800--Sobic004G066800 Sobic001G105100 Sobic001G105100 Sobic008G132800--Sobic001G105100 Sobic005G157200 Sobic005G157200 Sobic008G132800--Sobic005G157200 Sobic008G132800--Sobic010G065400 Sobic003G217100 Sobic003G217100 Sobic008G132800--Sobic003G217100 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic003G321700 Sobic003G321700 Sobic001G445800--Sobic003G321700 Sobic001G445800--Sobic002G078400 Sobic003G249800 Sobic003G249800 Sobic001G445800--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic001G445800--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic001G445800--Sobic010G018400 Sobic010G154700 Sobic010G154700 Sobic001G445800--Sobic010G154700 Sobic001G019900 Sobic001G019900 Sobic001G445800--Sobic001G019900 Sobic002G190900 Sobic002G190900 Sobic001G445800--Sobic002G190900 Sobic001G331900--Sobic004G107600 Sobic001G331900--Sobic005G157200 Sobic001G331900--Sobic008G058300 Sobic001G331900--Sobic002G078400 Sobic001G331900--Sobic008G132800 Sobic001G331900--Sobic004G300900 Sobic001G377800 Sobic001G377800 Sobic001G331900--Sobic001G377800 Sobic001G331900--Sobic003G362400 Sobic001G331900--Sobic001G529000 Sobic004G272300 Sobic004G272300 Sobic009G198500--Sobic004G272300 Sobic003G124800 Sobic003G124800 Sobic009G198500--Sobic003G124800 Sobic002G400000 Sobic002G400000 Sobic009G198500--Sobic002G400000 Sobic007G168600 Sobic007G168600 Sobic009G198500--Sobic007G168600 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic009G198500--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic009G198500--Sobic007G096700 Sobic006G212100 Sobic006G212100 Sobic009G198500--Sobic006G212100 Sobic010G029400--Sobic008G132800 Sobic010G029400--Sobic002G078400 Sobic003G025200 Sobic003G025200 Sobic010G029400--Sobic003G025200 Sobic002G406500 Sobic002G406500 Sobic010G029400--Sobic002G406500 Sobic002G115000 Sobic002G115000 Sobic010G029400--Sobic002G115000 Sobic010G029400--Sobic005G157200 Sobic010G029400--Sobic008G058300 Sobic010G029400--Sobic001G377800 Sobic010G029400--Sobic009G016201
Octagon: transcription factors


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