Gene annotation
Transcriptome id Sobic.010G018400.1
Synonym Sb10g001780
Functional annotation expressed protein
UniProt C5Z383
Pfam PF05493
Panther DB PTHR12263 PTHR12263:SF3
NCBI CDD KOG3500; Vacuolar H+-ATPase V0 sector, subunit M9.7 (M9.2)
KEGG Orthology K02153; ATPeV0E, V-type H+-transporting ATPase subunit e
Gene Ontology GO:0015078; proton transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT5G55290 : ATPase, V0 complex, subunit E
RAP-DB (Rice) LOC_Os04g56540.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G018400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G129400 cytochrome c oxidase polypeptide Vc, putative, expressed -
2 Sobic.003G368500 Yip1 domain containing protein, expressed -
3 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
4 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
5 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
6 Sobic.010G154700 - -
7 Sobic.001G132100 expressed protein -
8 Sobic.001G048832 - -
9 Sobic.001G445800 expressed protein -
10 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
11 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
12 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
13 Sobic.008G127500 expressed protein -
14 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
15 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
16 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
17 Sobic.002G190900 expressed protein -
18 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
19 Sobic.001G418900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G432000 LYR motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G018400 Sobic010G018400 Sobic008G129400 Sobic008G129400 Sobic010G018400--Sobic008G129400 Sobic003G368500 Sobic003G368500 Sobic010G018400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic010G018400--Sobic003G155400 Sobic009G176000 Sobic009G176000 Sobic010G018400--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic010G018400--Sobic007G051000 Sobic010G154700 Sobic010G154700 Sobic010G018400--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic010G018400--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic010G018400--Sobic001G048832 Sobic001G445800 Sobic001G445800 Sobic010G018400--Sobic001G445800 Sobic008G129400--Sobic010G018400 Sobic008G129400--Sobic009G176000 Sobic002G190900 Sobic002G190900 Sobic008G129400--Sobic002G190900 Sobic002G398901 Sobic002G398901 Sobic008G129400--Sobic002G398901 Sobic008G129400--Sobic007G051000 Sobic006G083500 Sobic006G083500 Sobic008G129400--Sobic006G083500 Sobic010G012500 Sobic010G012500 Sobic008G129400--Sobic010G012500 Sobic008G129400--Sobic001G445800 Sobic003G209000 Sobic003G209000 Sobic008G129400--Sobic003G209000 Sobic010G213400 Sobic010G213400 Sobic003G368500--Sobic010G213400 Sobic003G368500--Sobic010G018400 Sobic001G224400 Sobic001G224400 Sobic003G368500--Sobic001G224400 Sobic003G368500--Sobic003G155400 Sobic004G310300 Sobic004G310300 Sobic003G368500--Sobic004G310300 Sobic004G284500 Sobic004G284500 Sobic003G368500--Sobic004G284500 Sobic005G188100 Sobic005G188100 Sobic003G368500--Sobic005G188100 Sobic003G368500--Sobic007G051000 Sobic001G418900 Sobic001G418900 Sobic003G368500--Sobic001G418900 Sobic003G155400--Sobic010G154700 Sobic003G155400--Sobic003G209000 Sobic003G155400--Sobic004G310300 Sobic003G072300 Sobic003G072300 Sobic003G155400--Sobic003G072300 Sobic003G155400--Sobic010G018400 Sobic009G119900 Sobic009G119900 Sobic003G155400--Sobic009G119900 Sobic003G155400--Sobic007G051000 Sobic010G204500 Sobic010G204500 Sobic003G155400--Sobic010G204500 Sobic003G215700 Sobic003G215700 Sobic003G155400--Sobic003G215700 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic004G060500 Sobic004G060500 Sobic009G176000--Sobic004G060500 Sobic002G418400 Sobic002G418400 Sobic009G176000--Sobic002G418400 Sobic009G176000--Sobic003G215700 Sobic007G051000--Sobic010G012500 Sobic007G051000--Sobic009G176000 Sobic007G051000--Sobic002G398901 Sobic007G051000--Sobic004G211833 Sobic007G051000--Sobic002G190900 Sobic007G051000--Sobic006G083500 Sobic001G018500 Sobic001G018500 Sobic007G051000--Sobic001G018500 Sobic007G051000--Sobic003G209000 Sobic007G051000--Sobic010G204500 Sobic010G154700--Sobic001G048832 Sobic010G154700--Sobic001G132100 Sobic010G154700--Sobic007G051000 Sobic001G074700 Sobic001G074700 Sobic010G154700--Sobic001G074700 Sobic010G154700--Sobic003G155400 Sobic010G154700--Sobic009G119900 Sobic010G154700--Sobic002G190900 Sobic010G154700--Sobic002G398901 Sobic010G154700--Sobic009G176000 Sobic001G132100--Sobic001G048832 Sobic001G132100--Sobic010G154700 Sobic001G132100--Sobic002G190900 Sobic001G132100--Sobic005G188100 Sobic001G132100--Sobic007G051000 Sobic001G132100--Sobic002G398901 Sobic001G132100--Sobic009G119900 Sobic001G132100--Sobic010G018400 Sobic004G272800 Sobic004G272800 Sobic001G132100--Sobic004G272800 Sobic001G048832--Sobic010G154700 Sobic001G048832--Sobic001G132100 Sobic001G048832--Sobic007G051000 Sobic001G048832--Sobic009G176000 Sobic001G048832--Sobic005G188100 Sobic001G048832--Sobic002G190900 Sobic001G048832--Sobic009G119900 Sobic001G048832--Sobic004G272800 Sobic001G048832--Sobic002G398901 Sobic001G445800--Sobic008G129400 Sobic003G321700 Sobic003G321700 Sobic001G445800--Sobic003G321700 Sobic002G078400 Sobic002G078400 Sobic001G445800--Sobic002G078400 Sobic003G249800 Sobic003G249800 Sobic001G445800--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic001G445800--Sobic002G046100 Sobic001G445800--Sobic010G018400 Sobic001G445800--Sobic010G154700 Sobic001G019900 Sobic001G019900 Sobic001G445800--Sobic001G019900 Sobic001G445800--Sobic002G190900
Octagon: transcription factors


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