Gene annotation
Transcriptome id Sobic.001G418900.1
Synonym Sb01g039420
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WPE3
Pfam PF16860
Panther DB PTHR28066 PTHR28066:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47278 : -
RAP-DB (Rice) LOC_Os03g16874.3 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT69653 , KQK01977 , KQK01978
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G115100 hydrolase, NUDIX family, domain containing protein, expressed -
2 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
3 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
4 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
5 Sobic.002G257300 ribulose-phosphate 3-epimerase, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
6 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
7 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
8 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
9 Sobic.005G110800 - -
10 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
11 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
12 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
13 Sobic.002G398901 - -
14 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
15 Sobic.010G154700 - -
16 Sobic.001G172000 expressed protein -
17 Sobic.002G190900 expressed protein -
18 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
19 Sobic.006G137100 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
20 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6


Gene co-expression network
sample Sobic001G418900 Sobic001G418900 Sobic007G115100 Sobic007G115100 Sobic001G418900--Sobic007G115100 Sobic003G443300 Sobic003G443300 Sobic001G418900--Sobic003G443300 Sobic004G138800 Sobic004G138800 Sobic001G418900--Sobic004G138800 Sobic004G310300 Sobic004G310300 Sobic001G418900--Sobic004G310300 Sobic002G257300 Sobic002G257300 Sobic001G418900--Sobic002G257300 Sobic009G119900 Sobic009G119900 Sobic001G418900--Sobic009G119900 Sobic003G155400 Sobic003G155400 Sobic001G418900--Sobic003G155400 Sobic005G188100 Sobic005G188100 Sobic001G418900--Sobic005G188100 Sobic005G110800 Sobic005G110800 Sobic001G418900--Sobic005G110800 Sobic007G115100--Sobic001G418900 Sobic004G269700 Sobic004G269700 Sobic007G115100--Sobic004G269700 Sobic007G115100--Sobic003G155400 Sobic001G505500 Sobic001G505500 Sobic007G115100--Sobic001G505500 Sobic010G153100 Sobic010G153100 Sobic007G115100--Sobic010G153100 Sobic001G342200 Sobic001G342200 Sobic007G115100--Sobic001G342200 Sobic010G023800 Sobic010G023800 Sobic007G115100--Sobic010G023800 Sobic010G154700 Sobic010G154700 Sobic007G115100--Sobic010G154700 Sobic007G115100--Sobic004G138800 Sobic001G304400 Sobic001G304400 Sobic003G443300--Sobic001G304400 Sobic003G443300--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic003G443300--Sobic001G483100 Sobic001G085400 Sobic001G085400 Sobic003G443300--Sobic001G085400 Sobic006G216600 Sobic006G216600 Sobic003G443300--Sobic006G216600 Sobic006G156000 Sobic006G156000 Sobic003G443300--Sobic006G156000 Sobic009G212200 Sobic009G212200 Sobic003G443300--Sobic009G212200 Sobic003G249700 Sobic003G249700 Sobic003G443300--Sobic003G249700 Sobic003G219800 Sobic003G219800 Sobic003G443300--Sobic003G219800 Sobic004G138800--Sobic001G418900 Sobic004G224900 Sobic004G224900 Sobic004G138800--Sobic004G224900 Sobic007G076300 Sobic007G076300 Sobic004G138800--Sobic007G076300 Sobic004G138800--Sobic001G505500 Sobic004G138800--Sobic009G119900 Sobic001G096100 Sobic001G096100 Sobic004G138800--Sobic001G096100 Sobic003G330500 Sobic003G330500 Sobic004G138800--Sobic003G330500 Sobic001G007600 Sobic001G007600 Sobic004G138800--Sobic001G007600 Sobic006G252200 Sobic006G252200 Sobic004G138800--Sobic006G252200 Sobic004G310300--Sobic009G119900 Sobic004G259200 Sobic004G259200 Sobic004G310300--Sobic004G259200 Sobic007G051000 Sobic007G051000 Sobic004G310300--Sobic007G051000 Sobic001G018500 Sobic001G018500 Sobic004G310300--Sobic001G018500 Sobic010G204500 Sobic010G204500 Sobic004G310300--Sobic010G204500 Sobic004G310300--Sobic003G155400 Sobic004G066800 Sobic004G066800 Sobic004G310300--Sobic004G066800 Sobic001G513500 Sobic001G513500 Sobic004G310300--Sobic001G513500 Sobic004G310300--Sobic005G188100 Sobic002G398901 Sobic002G398901 Sobic002G257300--Sobic002G398901 Sobic002G257300--Sobic001G418900 Sobic002G190900 Sobic002G190900 Sobic002G257300--Sobic002G190900 Sobic003G209000 Sobic003G209000 Sobic002G257300--Sobic003G209000 Sobic004G051700 Sobic004G051700 Sobic002G257300--Sobic004G051700 Sobic010G239500 Sobic010G239500 Sobic002G257300--Sobic010G239500 Sobic002G418400 Sobic002G418400 Sobic002G257300--Sobic002G418400 Sobic002G257300--Sobic009G119900 Sobic003G363800 Sobic003G363800 Sobic002G257300--Sobic003G363800 Sobic002G356400 Sobic002G356400 Sobic009G119900--Sobic002G356400 Sobic009G119900--Sobic003G209000 Sobic009G119900--Sobic004G310300 Sobic004G170400 Sobic004G170400 Sobic009G119900--Sobic004G170400 Sobic009G119900--Sobic004G259200 Sobic009G119900--Sobic007G051000 Sobic001G172000 Sobic001G172000 Sobic009G119900--Sobic001G172000 Sobic006G083500 Sobic006G083500 Sobic009G119900--Sobic006G083500 Sobic009G119900--Sobic010G154700 Sobic003G155400--Sobic010G154700 Sobic003G155400--Sobic003G209000 Sobic003G155400--Sobic004G310300 Sobic003G072300 Sobic003G072300 Sobic003G155400--Sobic003G072300 Sobic010G018400 Sobic010G018400 Sobic003G155400--Sobic010G018400 Sobic003G155400--Sobic009G119900 Sobic003G155400--Sobic007G051000 Sobic003G155400--Sobic010G204500 Sobic003G215700 Sobic003G215700 Sobic003G155400--Sobic003G215700 Sobic005G188100--Sobic002G190900 Sobic009G163800 Sobic009G163800 Sobic005G188100--Sobic009G163800 Sobic005G188100--Sobic002G398901 Sobic005G188100--Sobic010G204500 Sobic009G166500 Sobic009G166500 Sobic005G188100--Sobic009G166500 Sobic005G188100--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic005G188100--Sobic006G047400 Sobic010G012500 Sobic010G012500 Sobic005G188100--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic005G188100--Sobic004G211833 Sobic005G110800--Sobic009G166500 Sobic002G286900 Sobic002G286900 Sobic005G110800--Sobic002G286900 Sobic001G493001 Sobic001G493001 Sobic005G110800--Sobic001G493001 Sobic002G081600 Sobic002G081600 Sobic005G110800--Sobic002G081600 Sobic009G050300 Sobic009G050300 Sobic005G110800--Sobic009G050300 Sobic004G008400 Sobic004G008400 Sobic005G110800--Sobic004G008400 Sobic005G110800--Sobic009G163800 Sobic003G346600 Sobic003G346600 Sobic005G110800--Sobic003G346600 Sobic001G130301 Sobic001G130301 Sobic005G110800--Sobic001G130301
Octagon: transcription factors


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