Gene annotation
Transcriptome id Sobic.001G172000.1
Synonym TOM5, Sb01g015010
Functional annotation expressed protein
UniProt C5WT79
Pfam -
Panther DB PTHR37251
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08040 : mitochondrial import receptor subunit TOM5 homolog
RAP-DB (Rice) LOC_Os12g38650.1 : expressed protein
MaizeGDB (Corn) Zm00025a007217
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G172000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G014500 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed K03016: RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3
2 Sobic.005G110800 - -
3 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
4 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
5 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
6 Sobic.006G081100 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
7 Sobic.004G103700 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
8 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
9 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
10 Sobic.004G280700 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17781: mitochondrial import inner membrane translocase subunit TIM13
11 Sobic.001G011200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta
12 Sobic.003G018600 LSM domain containing protein, expressed K11097: SNRPE, small nuclear ribonucleoprotein E
13 Sobic.004G104100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
14 Sobic.003G387900 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
15 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
16 Sobic.001G091801 - K02978: RP-S27e, small subunit ribosomal protein S27e
17 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
18 Sobic.009G166500 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
19 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
20 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3


Gene co-expression network
sample Sobic001G172000 Sobic001G172000 Sobic001G014500 Sobic001G014500 Sobic001G172000--Sobic001G014500 Sobic005G110800 Sobic005G110800 Sobic001G172000--Sobic005G110800 Sobic009G119900 Sobic009G119900 Sobic001G172000--Sobic009G119900 Sobic001G025600 Sobic001G025600 Sobic001G172000--Sobic001G025600 Sobic001G377800 Sobic001G377800 Sobic001G172000--Sobic001G377800 Sobic006G081100 Sobic006G081100 Sobic001G172000--Sobic006G081100 Sobic004G103700 Sobic004G103700 Sobic001G172000--Sobic004G103700 Sobic007G019400 Sobic007G019400 Sobic001G172000--Sobic007G019400 Sobic003G249700 Sobic003G249700 Sobic001G172000--Sobic003G249700 Sobic002G056200 Sobic002G056200 Sobic001G014500--Sobic002G056200 Sobic001G014500--Sobic001G172000 Sobic001G014500--Sobic001G377800 Sobic001G011200 Sobic001G011200 Sobic001G014500--Sobic001G011200 Sobic001G483100 Sobic001G483100 Sobic001G014500--Sobic001G483100 Sobic003G018600 Sobic003G018600 Sobic001G014500--Sobic003G018600 Sobic002G406500 Sobic002G406500 Sobic001G014500--Sobic002G406500 Sobic010G204500 Sobic010G204500 Sobic001G014500--Sobic010G204500 Sobic006G213000 Sobic006G213000 Sobic001G014500--Sobic006G213000 Sobic009G166500 Sobic009G166500 Sobic005G110800--Sobic009G166500 Sobic002G286900 Sobic002G286900 Sobic005G110800--Sobic002G286900 Sobic001G493001 Sobic001G493001 Sobic005G110800--Sobic001G493001 Sobic002G081600 Sobic002G081600 Sobic005G110800--Sobic002G081600 Sobic009G050300 Sobic009G050300 Sobic005G110800--Sobic009G050300 Sobic004G008400 Sobic004G008400 Sobic005G110800--Sobic004G008400 Sobic009G163800 Sobic009G163800 Sobic005G110800--Sobic009G163800 Sobic003G346600 Sobic003G346600 Sobic005G110800--Sobic003G346600 Sobic001G130301 Sobic001G130301 Sobic005G110800--Sobic001G130301 Sobic002G356400 Sobic002G356400 Sobic009G119900--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic009G119900--Sobic003G209000 Sobic004G310300 Sobic004G310300 Sobic009G119900--Sobic004G310300 Sobic004G170400 Sobic004G170400 Sobic009G119900--Sobic004G170400 Sobic004G259200 Sobic004G259200 Sobic009G119900--Sobic004G259200 Sobic007G051000 Sobic007G051000 Sobic009G119900--Sobic007G051000 Sobic009G119900--Sobic001G172000 Sobic006G083500 Sobic006G083500 Sobic009G119900--Sobic006G083500 Sobic010G154700 Sobic010G154700 Sobic009G119900--Sobic010G154700 Sobic001G025600--Sobic004G103700 Sobic001G025600--Sobic001G172000 Sobic001G481700 Sobic001G481700 Sobic001G025600--Sobic001G481700 Sobic003G129800 Sobic003G129800 Sobic001G025600--Sobic003G129800 Sobic001G513500 Sobic001G513500 Sobic001G025600--Sobic001G513500 Sobic003G442400 Sobic003G442400 Sobic001G025600--Sobic003G442400 Sobic004G224900 Sobic004G224900 Sobic001G025600--Sobic004G224900 Sobic001G018800 Sobic001G018800 Sobic001G025600--Sobic001G018800 Sobic003G287300 Sobic003G287300 Sobic001G025600--Sobic003G287300 Sobic001G377800--Sobic002G406500 Sobic004G104100 Sobic004G104100 Sobic001G377800--Sobic004G104100 Sobic001G085400 Sobic001G085400 Sobic001G377800--Sobic001G085400 Sobic001G091801 Sobic001G091801 Sobic001G377800--Sobic001G091801 Sobic007G019000 Sobic007G019000 Sobic001G377800--Sobic007G019000 Sobic006G221200 Sobic006G221200 Sobic001G377800--Sobic006G221200 Sobic001G377800--Sobic006G081100 Sobic002G049300 Sobic002G049300 Sobic001G377800--Sobic002G049300 Sobic001G377800--Sobic009G050300 Sobic006G081100--Sobic003G249700 Sobic008G108601 Sobic008G108601 Sobic006G081100--Sobic008G108601 Sobic005G019700 Sobic005G019700 Sobic006G081100--Sobic005G019700 Sobic006G081100--Sobic001G091801 Sobic006G081100--Sobic006G221200 Sobic002G047600 Sobic002G047600 Sobic006G081100--Sobic002G047600 Sobic006G081100--Sobic009G050300 Sobic010G230700 Sobic010G230700 Sobic006G081100--Sobic010G230700 Sobic001G225700 Sobic001G225700 Sobic006G081100--Sobic001G225700 Sobic004G103700--Sobic001G025600 Sobic004G103700--Sobic001G172000 Sobic006G010600 Sobic006G010600 Sobic004G103700--Sobic006G010600 Sobic002G135200 Sobic002G135200 Sobic004G103700--Sobic002G135200 Sobic004G103700--Sobic001G018800 Sobic004G103700--Sobic003G129800 Sobic007G134000 Sobic007G134000 Sobic004G103700--Sobic007G134000 Sobic002G222900 Sobic002G222900 Sobic004G103700--Sobic002G222900 Sobic010G150575 Sobic010G150575 Sobic004G103700--Sobic010G150575 Sobic007G019400--Sobic003G249700 Sobic009G076400 Sobic009G076400 Sobic007G019400--Sobic009G076400 Sobic007G019400--Sobic002G047600 Sobic010G251600 Sobic010G251600 Sobic007G019400--Sobic010G251600 Sobic010G206200 Sobic010G206200 Sobic007G019400--Sobic010G206200 Sobic007G019400--Sobic006G213000 Sobic003G387900 Sobic003G387900 Sobic007G019400--Sobic003G387900 Sobic007G019400--Sobic002G056200 Sobic001G226500 Sobic001G226500 Sobic007G019400--Sobic001G226500 Sobic003G249700--Sobic007G019400 Sobic003G249700--Sobic001G226500 Sobic001G039400 Sobic001G039400 Sobic003G249700--Sobic001G039400 Sobic003G249700--Sobic003G387900 Sobic003G249700--Sobic002G047600 Sobic007G178600 Sobic007G178600 Sobic003G249700--Sobic007G178600 Sobic003G249700--Sobic004G008400 Sobic003G249700--Sobic001G085400 Sobic003G109600 Sobic003G109600 Sobic003G249700--Sobic003G109600
Octagon: transcription factors


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