Gene annotation
Transcriptome id Sobic.001G011200.1
Synonym Sb01g001100, BTF3, ATBTF3
Functional annotation transcription factor BTF3, putative, expressed
UniProt C5WSV6
Pfam PF01849
Panther DB PTHR10351 PTHR10351:SF47
NCBI CDD KOG2240; RNA polymerase II general transcription factor BTF3 and related proteins
KEGG Orthology K01527; EGD1, nascent polypeptide-associated complex subunit beta
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17880 : basic transcription factor 3
RAP-DB (Rice) LOC_Os03g63400.1 : transcription factor BTF3, putative, expressed
MaizeGDB (Corn) Zm00025a009036
Brachypodium KQJ97150 , KQK12096
Barley HORVU7Hr1G110870.1 , HORVU5Hr1G122170.8 , HORVU5Hr1G122170.9 , HORVU5Hr1G122170.4 , HORVU5Hr1G122170.5 , HORVU5Hr1G122170.6 , HORVU5Hr1G122170.7 , HORVU5Hr1G122170.1 , HORVU5Hr1G122170.2 , HORVU5Hr1G122170.3 , HORVU5Hr1G122170.13 , HORVU5Hr1G122170.12 , HORVU4Hr1G033400.1 , HORVU5Hr1G122170.10 , HORVU5Hr1G122170.11
Wheat TraesCS4A02G332100
Populus -


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cDNA sequences
Sobic.001G011200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G436200 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
2 Sobic.002G374900 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
3 Sobic.001G091801 - K02978: RP-S27e, small subunit ribosomal protein S27e
4 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
5 Sobic.004G198400 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
6 Sobic.003G280700 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
7 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
8 Sobic.001G046300 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
9 Sobic.001G016400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
10 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
11 Sobic.009G166500 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
12 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
13 Sobic.004G104100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
14 Sobic.004G280700 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17781: mitochondrial import inner membrane translocase subunit TIM13
15 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
16 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
17 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
18 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
19 Sobic.004G145801 - K02978: RP-S27e, small subunit ribosomal protein S27e
20 Sobic.001G014500 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed K03016: RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3


Gene co-expression network
sample Sobic001G011200 Sobic001G011200 Sobic001G436200 Sobic001G436200 Sobic001G011200--Sobic001G436200 Sobic002G374900 Sobic002G374900 Sobic001G011200--Sobic002G374900 Sobic001G091801 Sobic001G091801 Sobic001G011200--Sobic001G091801 Sobic002G056200 Sobic002G056200 Sobic001G011200--Sobic002G056200 Sobic004G198400 Sobic004G198400 Sobic001G011200--Sobic004G198400 Sobic003G280700 Sobic003G280700 Sobic001G011200--Sobic003G280700 Sobic001G403500 Sobic001G403500 Sobic001G011200--Sobic001G403500 Sobic001G046300 Sobic001G046300 Sobic001G011200--Sobic001G046300 Sobic001G016400 Sobic001G016400 Sobic001G011200--Sobic001G016400 Sobic002G379500 Sobic002G379500 Sobic001G436200--Sobic002G379500 Sobic002G047600 Sobic002G047600 Sobic001G436200--Sobic002G047600 Sobic001G436200--Sobic002G056200 Sobic001G436200--Sobic001G016400 Sobic001G436200--Sobic002G374900 Sobic006G138100 Sobic006G138100 Sobic001G436200--Sobic006G138100 Sobic006G213000 Sobic006G213000 Sobic001G436200--Sobic006G213000 Sobic001G016500 Sobic001G016500 Sobic001G436200--Sobic001G016500 Sobic006G137100 Sobic006G137100 Sobic001G436200--Sobic006G137100 Sobic002G374900--Sobic001G436200 Sobic002G374900--Sobic001G091801 Sobic002G374900--Sobic004G198400 Sobic002G374900--Sobic001G016400 Sobic002G374900--Sobic001G011200 Sobic009G050300 Sobic009G050300 Sobic002G374900--Sobic009G050300 Sobic007G019000 Sobic007G019000 Sobic002G374900--Sobic007G019000 Sobic010G166100 Sobic010G166100 Sobic002G374900--Sobic010G166100 Sobic004G104100 Sobic004G104100 Sobic002G374900--Sobic004G104100 Sobic004G145801 Sobic004G145801 Sobic001G091801--Sobic004G145801 Sobic001G091801--Sobic004G104100 Sobic007G212600 Sobic007G212600 Sobic001G091801--Sobic007G212600 Sobic001G091801--Sobic009G050300 Sobic009G166500 Sobic009G166500 Sobic001G091801--Sobic009G166500 Sobic009G163800 Sobic009G163800 Sobic001G091801--Sobic009G163800 Sobic005G019700 Sobic005G019700 Sobic001G091801--Sobic005G019700 Sobic003G322400 Sobic003G322400 Sobic001G091801--Sobic003G322400 Sobic002G175100 Sobic002G175100 Sobic001G091801--Sobic002G175100 Sobic002G056200--Sobic002G379500 Sobic002G056200--Sobic006G137100 Sobic002G056200--Sobic001G403500 Sobic002G056200--Sobic006G213000 Sobic007G019400 Sobic007G019400 Sobic002G056200--Sobic007G019400 Sobic003G387900 Sobic003G387900 Sobic002G056200--Sobic003G387900 Sobic003G109600 Sobic003G109600 Sobic002G056200--Sobic003G109600 Sobic002G056200--Sobic001G436200 Sobic002G056200--Sobic002G047600 Sobic004G198400--Sobic001G403500 Sobic004G198400--Sobic002G379500 Sobic004G198400--Sobic009G050300 Sobic010G206200 Sobic010G206200 Sobic004G198400--Sobic010G206200 Sobic004G280700 Sobic004G280700 Sobic004G198400--Sobic004G280700 Sobic004G198400--Sobic006G213000 Sobic009G054800 Sobic009G054800 Sobic004G198400--Sobic009G054800 Sobic006G221200 Sobic006G221200 Sobic004G198400--Sobic006G221200 Sobic004G198400--Sobic006G137100 Sobic002G049300 Sobic002G049300 Sobic003G280700--Sobic002G049300 Sobic003G280700--Sobic001G011200 Sobic006G081100 Sobic006G081100 Sobic003G280700--Sobic006G081100 Sobic005G050500 Sobic005G050500 Sobic003G280700--Sobic005G050500 Sobic001G085400 Sobic001G085400 Sobic003G280700--Sobic001G085400 Sobic003G280700--Sobic004G198400 Sobic003G280700--Sobic002G056200 Sobic009G022400 Sobic009G022400 Sobic003G280700--Sobic009G022400 Sobic003G280700--Sobic001G403500 Sobic001G403500--Sobic009G050300 Sobic001G403500--Sobic004G198400 Sobic009G215200 Sobic009G215200 Sobic001G403500--Sobic009G215200 Sobic001G403500--Sobic002G379500 Sobic007G197800 Sobic007G197800 Sobic001G403500--Sobic007G197800 Sobic002G081600 Sobic002G081600 Sobic001G403500--Sobic002G081600 Sobic001G403500--Sobic006G137100 Sobic006G116700 Sobic006G116700 Sobic001G403500--Sobic006G116700 Sobic001G403500--Sobic010G206200 Sobic001G046300--Sobic007G212600 Sobic004G103800 Sobic004G103800 Sobic001G046300--Sobic004G103800 Sobic001G046300--Sobic001G091801 Sobic002G364100 Sobic002G364100 Sobic001G046300--Sobic002G364100 Sobic002G259000 Sobic002G259000 Sobic001G046300--Sobic002G259000 Sobic001G046300--Sobic004G104100 Sobic001G046300--Sobic001G011200 Sobic004G104300 Sobic004G104300 Sobic001G046300--Sobic004G104300 Sobic001G046300--Sobic009G163800 Sobic001G016400--Sobic009G050300 Sobic001G016400--Sobic009G215200 Sobic001G018900 Sobic001G018900 Sobic001G016400--Sobic001G018900 Sobic001G016400--Sobic006G116700 Sobic001G016400--Sobic007G197800 Sobic001G402050 Sobic001G402050 Sobic001G016400--Sobic001G402050 Sobic007G018300 Sobic007G018300 Sobic001G016400--Sobic007G018300 Sobic001G016400--Sobic001G403500 Sobic001G016400--Sobic002G081600
Octagon: transcription factors


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