Gene annotation
Transcriptome id Sobic.004G138800.1
Synonym Sb04g016750, PFD1
Functional annotation prefoldin subunit, putative, expressed
UniProt C5Y120
Pfam PF01920
Panther DB PTHR20903
NCBI CDD KOG3501; Molecular chaperone Prefoldin, subunit 1
KEGG Orthology K09548; prefoldin subunit 1
Gene Ontology GO:0016272; prefoldin complex GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT2G07340 : PREFOLDIN 1
RAP-DB (Rice) LOC_Os02g26440.1 : prefoldin subunit, putative, expressed
MaizeGDB (Corn) Zm00025a020290
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G418900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
3 Sobic.007G076300 26S proteasome non-ATPase regulatory subunit 8, putative, expressed K03031: PSMD8, 26S proteasome regulatory subunit N12
4 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
5 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
6 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.003G330500 peptidase, T1 family, putative, expressed -
8 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
9 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
10 Sobic.008G132400 expressed protein -
11 Sobic.001G018800 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
12 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
13 Sobic.004G216800 h/ACA ribonucleoprotein complex subunit 3, putative, expressed K11130: NOP10, H/ACA ribonucleoprotein complex subunit 3
14 Sobic.007G115100 hydrolase, NUDIX family, domain containing protein, expressed -
15 Sobic.001G172000 expressed protein -
16 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
17 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
18 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
19 Sobic.002G255100 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
20 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1


Gene co-expression network
sample Sobic004G138800 Sobic004G138800 Sobic001G418900 Sobic001G418900 Sobic004G138800--Sobic001G418900 Sobic004G224900 Sobic004G224900 Sobic004G138800--Sobic004G224900 Sobic007G076300 Sobic007G076300 Sobic004G138800--Sobic007G076300 Sobic001G505500 Sobic001G505500 Sobic004G138800--Sobic001G505500 Sobic009G119900 Sobic009G119900 Sobic004G138800--Sobic009G119900 Sobic001G096100 Sobic001G096100 Sobic004G138800--Sobic001G096100 Sobic003G330500 Sobic003G330500 Sobic004G138800--Sobic003G330500 Sobic001G007600 Sobic001G007600 Sobic004G138800--Sobic001G007600 Sobic006G252200 Sobic006G252200 Sobic004G138800--Sobic006G252200 Sobic007G115100 Sobic007G115100 Sobic001G418900--Sobic007G115100 Sobic003G443300 Sobic003G443300 Sobic001G418900--Sobic003G443300 Sobic001G418900--Sobic004G138800 Sobic004G310300 Sobic004G310300 Sobic001G418900--Sobic004G310300 Sobic002G257300 Sobic002G257300 Sobic001G418900--Sobic002G257300 Sobic001G418900--Sobic009G119900 Sobic003G155400 Sobic003G155400 Sobic001G418900--Sobic003G155400 Sobic005G188100 Sobic005G188100 Sobic001G418900--Sobic005G188100 Sobic005G110800 Sobic005G110800 Sobic001G418900--Sobic005G110800 Sobic004G224900--Sobic003G330500 Sobic004G224900--Sobic006G252200 Sobic007G176200 Sobic007G176200 Sobic004G224900--Sobic007G176200 Sobic004G224900--Sobic004G138800 Sobic004G224900--Sobic007G076300 Sobic001G481700 Sobic001G481700 Sobic004G224900--Sobic001G481700 Sobic001G502200 Sobic001G502200 Sobic004G224900--Sobic001G502200 Sobic001G458700 Sobic001G458700 Sobic004G224900--Sobic001G458700 Sobic001G236300 Sobic001G236300 Sobic004G224900--Sobic001G236300 Sobic007G076300--Sobic004G224900 Sobic007G076300--Sobic004G138800 Sobic002G257400 Sobic002G257400 Sobic007G076300--Sobic002G257400 Sobic007G076300--Sobic003G330500 Sobic007G076300--Sobic001G505500 Sobic003G129800 Sobic003G129800 Sobic007G076300--Sobic003G129800 Sobic007G076300--Sobic004G310300 Sobic005G050500 Sobic005G050500 Sobic007G076300--Sobic005G050500 Sobic010G154700 Sobic010G154700 Sobic007G076300--Sobic010G154700 Sobic001G505500--Sobic004G138800 Sobic001G505500--Sobic001G418900 Sobic001G505500--Sobic007G115100 Sobic001G505500--Sobic007G076300 Sobic007G092100 Sobic007G092100 Sobic001G505500--Sobic007G092100 Sobic001G334300 Sobic001G334300 Sobic001G505500--Sobic001G334300 Sobic001G018800 Sobic001G018800 Sobic001G505500--Sobic001G018800 Sobic009G227400 Sobic009G227400 Sobic001G505500--Sobic009G227400 Sobic001G513500 Sobic001G513500 Sobic001G505500--Sobic001G513500 Sobic002G356400 Sobic002G356400 Sobic009G119900--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic009G119900--Sobic003G209000 Sobic009G119900--Sobic004G310300 Sobic004G170400 Sobic004G170400 Sobic009G119900--Sobic004G170400 Sobic004G259200 Sobic004G259200 Sobic009G119900--Sobic004G259200 Sobic007G051000 Sobic007G051000 Sobic009G119900--Sobic007G051000 Sobic001G172000 Sobic001G172000 Sobic009G119900--Sobic001G172000 Sobic006G083500 Sobic006G083500 Sobic009G119900--Sobic006G083500 Sobic009G119900--Sobic010G154700 Sobic004G066800 Sobic004G066800 Sobic001G096100--Sobic004G066800 Sobic001G096100--Sobic004G138800 Sobic001G096100--Sobic003G330500 Sobic001G096100--Sobic006G252200 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700 Sobic003G330500--Sobic004G224900 Sobic003G330500--Sobic007G176200 Sobic003G330500--Sobic007G076300 Sobic003G330500--Sobic006G252200 Sobic003G330500--Sobic001G458700 Sobic001G010700 Sobic001G010700 Sobic003G330500--Sobic001G010700 Sobic003G330500--Sobic001G502200 Sobic003G330500--Sobic004G138800 Sobic003G330500--Sobic001G096100 Sobic001G007600--Sobic004G138800 Sobic009G067000 Sobic009G067000 Sobic001G007600--Sobic009G067000 Sobic001G007600--Sobic001G418900 Sobic001G007600--Sobic003G443300 Sobic001G007600--Sobic001G505500 Sobic003G368500 Sobic003G368500 Sobic001G007600--Sobic003G368500 Sobic001G007600--Sobic006G252200 Sobic009G182300 Sobic009G182300 Sobic001G007600--Sobic009G182300 Sobic001G007600--Sobic007G076300 Sobic006G252200--Sobic007G176200 Sobic006G252200--Sobic001G458700 Sobic006G252200--Sobic004G224900 Sobic006G252200--Sobic001G010700 Sobic006G252200--Sobic003G330500 Sobic002G428200 Sobic002G428200 Sobic006G252200--Sobic002G428200 Sobic006G252200--Sobic004G138800 Sobic001G283200 Sobic001G283200 Sobic006G252200--Sobic001G283200 Sobic006G252200--Sobic001G096100
Octagon: transcription factors


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