Gene annotation
Transcriptome id Sobic.002G255100.1
Synonym Sb02g029030
Functional annotation 60S ribosomal protein L32, putative, expressed
UniProt C5X4M6
Pfam PF01655
Panther DB PTHR23413
NCBI CDD KOG0878; 60S ribosomal protein L32
KEGG Orthology K02912; RP-L32e, large subunit ribosomal protein L32e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT4G18100 : Ribosomal protein L32e
RAP-DB (Rice) LOC_Os08g41300.1 : 60S ribosomal protein L32, putative, expressed
MaizeGDB (Corn) Zm00025a014273 , Zm00025a047543 , Zm00025a047545 , Zm00025a005205 , Zm00025a030376
Brachypodium KQJ99073 , KQJ99064 , KQJ99065 , KQJ90888 , KQJ90885 , KQJ90884
Barley HORVU5Hr1G075500.2 , HORVU5Hr1G075500.3 , HORVU5Hr1G075500.1 , HORVU5Hr1G075420.1 , HORVU5Hr1G075420.3 , HORVU5Hr1G075420.2
Wheat TraesCS7A02G256300 , TraesCS5D02G286400 , TraesCS5B02G278500 , TraesCS5B02G278700 , TraesCS5B02G278500 , TraesCS7D02G257100 , TraesCS5A02G279100 , TraesCS5A02G279400 , TraesCS7B02G152900 , TraesCS5D02G286200 , TraesCS5D02G286200
Populus PNT12313 , PNT58461 , PNT58460


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cDNA sequences
Sobic.002G255100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G227400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
2 Sobic.009G144300 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
3 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
4 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
5 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
6 Sobic.002G304900 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
7 Sobic.010G023900 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
8 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
9 Sobic.004G216800 h/ACA ribonucleoprotein complex subunit 3, putative, expressed K11130: NOP10, H/ACA ribonucleoprotein complex subunit 3
10 Sobic.002G331300 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
11 Sobic.003G280700 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
12 Sobic.004G213200 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
13 Sobic.009G114400 expressed protein K14839: nucleolar protein 16
14 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
15 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
16 Sobic.005G050500 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
17 Sobic.001G018800 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
18 Sobic.004G342400 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
19 Sobic.001G058900 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
20 Sobic.009G022400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae


Gene co-expression network
sample Sobic002G255100 Sobic002G255100 Sobic009G227400 Sobic009G227400 Sobic002G255100--Sobic009G227400 Sobic009G144300 Sobic009G144300 Sobic002G255100--Sobic009G144300 Sobic001G334300 Sobic001G334300 Sobic002G255100--Sobic001G334300 Sobic001G085400 Sobic001G085400 Sobic002G255100--Sobic001G085400 Sobic002G049300 Sobic002G049300 Sobic002G255100--Sobic002G049300 Sobic002G304900 Sobic002G304900 Sobic002G255100--Sobic002G304900 Sobic010G023900 Sobic010G023900 Sobic002G255100--Sobic010G023900 Sobic009G233400 Sobic009G233400 Sobic002G255100--Sobic009G233400 Sobic004G216800 Sobic004G216800 Sobic002G255100--Sobic004G216800 Sobic009G227400--Sobic001G334300 Sobic009G227400--Sobic009G144300 Sobic006G137100 Sobic006G137100 Sobic009G227400--Sobic006G137100 Sobic002G286900 Sobic002G286900 Sobic009G227400--Sobic002G286900 Sobic009G076400 Sobic009G076400 Sobic009G227400--Sobic009G076400 Sobic009G227400--Sobic002G049300 Sobic009G227400--Sobic002G255100 Sobic009G227400--Sobic010G023900 Sobic003G387900 Sobic003G387900 Sobic009G227400--Sobic003G387900 Sobic009G144300--Sobic001G334300 Sobic009G144300--Sobic001G085400 Sobic009G144300--Sobic009G227400 Sobic009G144300--Sobic009G233400 Sobic009G144300--Sobic002G304900 Sobic009G144300--Sobic003G387900 Sobic006G216600 Sobic006G216600 Sobic009G144300--Sobic006G216600 Sobic009G144300--Sobic002G049300 Sobic009G144300--Sobic002G255100 Sobic001G334300--Sobic009G233400 Sobic001G334300--Sobic002G304900 Sobic001G334300--Sobic003G387900 Sobic001G334300--Sobic009G144300 Sobic001G334300--Sobic001G085400 Sobic009G179100 Sobic009G179100 Sobic001G334300--Sobic009G179100 Sobic001G334300--Sobic009G227400 Sobic005G050500 Sobic005G050500 Sobic001G334300--Sobic005G050500 Sobic001G334300--Sobic002G049300 Sobic002G115000 Sobic002G115000 Sobic001G085400--Sobic002G115000 Sobic001G085400--Sobic002G304900 Sobic001G085400--Sobic002G049300 Sobic002G047600 Sobic002G047600 Sobic001G085400--Sobic002G047600 Sobic001G085400--Sobic006G216600 Sobic003G249700 Sobic003G249700 Sobic001G085400--Sobic003G249700 Sobic001G085400--Sobic003G387900 Sobic007G178600 Sobic007G178600 Sobic001G085400--Sobic007G178600 Sobic002G406500 Sobic002G406500 Sobic001G085400--Sobic002G406500 Sobic002G049300--Sobic001G085400 Sobic002G049300--Sobic007G178600 Sobic002G049300--Sobic002G047600 Sobic009G022400 Sobic009G022400 Sobic002G049300--Sobic009G022400 Sobic008G108601 Sobic008G108601 Sobic002G049300--Sobic008G108601 Sobic002G049300--Sobic003G249700 Sobic001G436200 Sobic001G436200 Sobic002G049300--Sobic001G436200 Sobic002G049300--Sobic006G137100 Sobic002G049300--Sobic002G286900 Sobic002G304900--Sobic001G085400 Sobic002G304900--Sobic009G233400 Sobic001G058900 Sobic001G058900 Sobic002G304900--Sobic001G058900 Sobic002G304900--Sobic001G334300 Sobic002G304900--Sobic009G179100 Sobic002G304900--Sobic005G050500 Sobic002G304900--Sobic003G387900 Sobic010G069400 Sobic010G069400 Sobic002G304900--Sobic010G069400 Sobic001G039400 Sobic001G039400 Sobic002G304900--Sobic001G039400 Sobic004G342400 Sobic004G342400 Sobic010G023900--Sobic004G342400 Sobic010G023900--Sobic001G334300 Sobic010G023900--Sobic009G227400 Sobic010G023900--Sobic002G286900 Sobic010G023900--Sobic003G387900 Sobic010G023900--Sobic009G179100 Sobic010G023900--Sobic009G233400 Sobic006G213000 Sobic006G213000 Sobic010G023900--Sobic006G213000 Sobic001G226500 Sobic001G226500 Sobic010G023900--Sobic001G226500 Sobic009G233400--Sobic001G334300 Sobic009G233400--Sobic002G304900 Sobic009G233400--Sobic010G069400 Sobic009G233400--Sobic001G039400 Sobic009G233400--Sobic005G050500 Sobic009G233400--Sobic001G058900 Sobic009G233400--Sobic003G249700 Sobic003G109600 Sobic003G109600 Sobic009G233400--Sobic003G109600 Sobic009G233400--Sobic001G085400 Sobic004G216800--Sobic009G227400 Sobic004G216800--Sobic002G255100 Sobic004G216800--Sobic001G085400 Sobic004G138800 Sobic004G138800 Sobic004G216800--Sobic004G138800 Sobic004G216800--Sobic009G144300 Sobic001G444800 Sobic001G444800 Sobic004G216800--Sobic001G444800 Sobic008G132400 Sobic008G132400 Sobic004G216800--Sobic008G132400 Sobic007G100425 Sobic007G100425 Sobic004G216800--Sobic007G100425 Sobic001G018800 Sobic001G018800 Sobic004G216800--Sobic001G018800
Octagon: transcription factors


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