Gene annotation
Transcriptome id Sobic.008G132400.1
Synonym Sb08g018450
Functional annotation expressed protein
UniProt A0A1B6PDF6
Pfam PF05347
Panther DB PTHR13166 PTHR13166:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G17300 : -
RAP-DB (Rice) LOC_Os12g37850.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G022130.6 , HORVU5Hr1G022130.5 , HORVU5Hr1G022130.4 , HORVU5Hr1G022130.3 , HORVU5Hr1G022130.2 , HORVU5Hr1G022130.1 , HORVU6Hr1G014630.2 , HORVU6Hr1G014630.3 , HORVU6Hr1G014630.1 , HORVU6Hr1G014630.4
Wheat TraesCS5A02G085100 , TraesCS5D02G097500 , TraesCS5B02G091100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
2 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
3 Sobic.004G216800 h/ACA ribonucleoprotein complex subunit 3, putative, expressed K11130: NOP10, H/ACA ribonucleoprotein complex subunit 3
4 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
5 Sobic.003G363800 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
6 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
7 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
8 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
9 Sobic.001G304400 expressed protein -
10 Sobic.009G144300 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
11 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
12 Sobic.009G227400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
13 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
14 Sobic.007G100425 - -
15 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
16 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
17 Sobic.004G213200 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
18 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
19 Sobic.002G255100 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
20 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e


Gene co-expression network
sample Sobic008G132400 Sobic008G132400 Sobic004G138800 Sobic004G138800 Sobic008G132400--Sobic004G138800 Sobic006G216600 Sobic006G216600 Sobic008G132400--Sobic006G216600 Sobic004G216800 Sobic004G216800 Sobic008G132400--Sobic004G216800 Sobic006G035900 Sobic006G035900 Sobic008G132400--Sobic006G035900 Sobic003G363800 Sobic003G363800 Sobic008G132400--Sobic003G363800 Sobic001G040100 Sobic001G040100 Sobic008G132400--Sobic001G040100 Sobic001G057300 Sobic001G057300 Sobic008G132400--Sobic001G057300 Sobic001G085400 Sobic001G085400 Sobic008G132400--Sobic001G085400 Sobic001G304400 Sobic001G304400 Sobic008G132400--Sobic001G304400 Sobic001G418900 Sobic001G418900 Sobic004G138800--Sobic001G418900 Sobic004G224900 Sobic004G224900 Sobic004G138800--Sobic004G224900 Sobic007G076300 Sobic007G076300 Sobic004G138800--Sobic007G076300 Sobic001G505500 Sobic001G505500 Sobic004G138800--Sobic001G505500 Sobic009G119900 Sobic009G119900 Sobic004G138800--Sobic009G119900 Sobic001G096100 Sobic001G096100 Sobic004G138800--Sobic001G096100 Sobic003G330500 Sobic003G330500 Sobic004G138800--Sobic003G330500 Sobic001G007600 Sobic001G007600 Sobic004G138800--Sobic001G007600 Sobic006G252200 Sobic006G252200 Sobic004G138800--Sobic006G252200 Sobic006G216600--Sobic001G085400 Sobic003G387900 Sobic003G387900 Sobic006G216600--Sobic003G387900 Sobic002G304900 Sobic002G304900 Sobic006G216600--Sobic002G304900 Sobic006G216600--Sobic001G057300 Sobic002G049300 Sobic002G049300 Sobic006G216600--Sobic002G049300 Sobic009G144300 Sobic009G144300 Sobic006G216600--Sobic009G144300 Sobic002G115000 Sobic002G115000 Sobic006G216600--Sobic002G115000 Sobic002G047600 Sobic002G047600 Sobic006G216600--Sobic002G047600 Sobic006G216600--Sobic003G363800 Sobic009G227400 Sobic009G227400 Sobic004G216800--Sobic009G227400 Sobic002G255100 Sobic002G255100 Sobic004G216800--Sobic002G255100 Sobic004G216800--Sobic001G085400 Sobic004G216800--Sobic004G138800 Sobic004G216800--Sobic009G144300 Sobic001G444800 Sobic001G444800 Sobic004G216800--Sobic001G444800 Sobic004G216800--Sobic008G132400 Sobic007G100425 Sobic007G100425 Sobic004G216800--Sobic007G100425 Sobic001G018800 Sobic001G018800 Sobic004G216800--Sobic001G018800 Sobic006G035900--Sobic001G057300 Sobic006G035900--Sobic006G216600 Sobic005G112800 Sobic005G112800 Sobic006G035900--Sobic005G112800 Sobic006G035900--Sobic008G132400 Sobic001G334300 Sobic001G334300 Sobic006G035900--Sobic001G334300 Sobic006G035900--Sobic002G304900 Sobic010G264300 Sobic010G264300 Sobic006G035900--Sobic010G264300 Sobic003G261100 Sobic003G261100 Sobic006G035900--Sobic003G261100 Sobic001G370700 Sobic001G370700 Sobic006G035900--Sobic001G370700 Sobic003G346600 Sobic003G346600 Sobic003G363800--Sobic003G346600 Sobic006G137100 Sobic006G137100 Sobic003G363800--Sobic006G137100 Sobic007G178600 Sobic007G178600 Sobic003G363800--Sobic007G178600 Sobic003G363800--Sobic002G047600 Sobic003G363800--Sobic003G387900 Sobic009G076400 Sobic009G076400 Sobic003G363800--Sobic009G076400 Sobic003G363800--Sobic001G085400 Sobic004G331400 Sobic004G331400 Sobic003G363800--Sobic004G331400 Sobic003G363800--Sobic006G216600 Sobic001G040100--Sobic005G112800 Sobic003G219800 Sobic003G219800 Sobic001G040100--Sobic003G219800 Sobic002G356400 Sobic002G356400 Sobic001G040100--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic001G040100--Sobic003G209000 Sobic003G151600 Sobic003G151600 Sobic001G040100--Sobic003G151600 Sobic003G410500 Sobic003G410500 Sobic001G040100--Sobic003G410500 Sobic006G156000 Sobic006G156000 Sobic001G040100--Sobic006G156000 Sobic002G418400 Sobic002G418400 Sobic001G040100--Sobic002G418400 Sobic002G257300 Sobic002G257300 Sobic001G040100--Sobic002G257300 Sobic001G057300--Sobic006G216600 Sobic001G057300--Sobic002G304900 Sobic008G135000 Sobic008G135000 Sobic001G057300--Sobic008G135000 Sobic001G058900 Sobic001G058900 Sobic001G057300--Sobic001G058900 Sobic001G057300--Sobic001G334300 Sobic001G057300--Sobic001G085400 Sobic001G057300--Sobic006G035900 Sobic001G057300--Sobic002G115000 Sobic001G057300--Sobic003G387900 Sobic001G085400--Sobic002G115000 Sobic001G085400--Sobic002G304900 Sobic001G085400--Sobic002G049300 Sobic001G085400--Sobic002G047600 Sobic001G085400--Sobic006G216600 Sobic003G249700 Sobic003G249700 Sobic001G085400--Sobic003G249700 Sobic001G085400--Sobic003G387900 Sobic001G085400--Sobic007G178600 Sobic002G406500 Sobic002G406500 Sobic001G085400--Sobic002G406500 Sobic003G443300 Sobic003G443300 Sobic001G304400--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic001G304400--Sobic001G432000 Sobic001G286200 Sobic001G286200 Sobic001G304400--Sobic001G286200 Sobic001G304400--Sobic003G249700 Sobic009G212200 Sobic009G212200 Sobic001G304400--Sobic009G212200 Sobic007G019400 Sobic007G019400 Sobic001G304400--Sobic007G019400 Sobic001G304400--Sobic002G304900 Sobic003G150000 Sobic003G150000 Sobic001G304400--Sobic003G150000 Sobic009G062000 Sobic009G062000 Sobic001G304400--Sobic009G062000
Octagon: transcription factors


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