Gene annotation
Transcriptome id Sobic.002G073800.1
Synonym Sb02g006170, VMA10, AVMA10
Functional annotation vacuolar ATPase G subunit, putative, expressed
UniProt C5XCQ9
Pfam PF03179
Panther DB PTHR12713
NCBI CDD KOG1772; Vacuolar H+-ATPase V1 sector, subunit G
KEGG Orthology K02152; ATPeV1G, V-type H+-transporting ATPase subunit G
Gene Ontology GO:0016471; vacuolar proton-transporting V-type ATPase complex


Orthologs (automatic annotation)
TAIR AT4G23710 : vacuolar ATP synthase subunit G2
RAP-DB (Rice) LOC_Os04g51270.2 : vacuolar ATPase G subunit, putative, expressed
MaizeGDB (Corn) Zm00025a045365 , Zm00025a013420
Brachypodium KQK05072
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G073800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
2 Sobic.009G212200 expressed protein -
3 Sobic.008G127500 expressed protein -
4 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
5 Sobic.001G095632 - -
6 Sobic.001G304400 expressed protein -
7 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
8 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
9 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
10 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
11 Sobic.008G129400 cytochrome c oxidase polypeptide Vc, putative, expressed -
12 Sobic.004G060500 fiber protein Fb15, putative, expressed -
13 Sobic.004G099900 early nodulin 93 ENOD93 protein, putative, expressed -
14 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
15 Sobic.001G086300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
16 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
17 Sobic.001G116700 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
18 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
19 Sobic.001G048832 - -
20 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6


Gene co-expression network
sample Sobic002G073800 Sobic002G073800 Sobic010G018400 Sobic010G018400 Sobic002G073800--Sobic010G018400 Sobic009G212200 Sobic009G212200 Sobic002G073800--Sobic009G212200 Sobic008G127500 Sobic008G127500 Sobic002G073800--Sobic008G127500 Sobic009G062000 Sobic009G062000 Sobic002G073800--Sobic009G062000 Sobic001G095632 Sobic001G095632 Sobic002G073800--Sobic001G095632 Sobic001G304400 Sobic001G304400 Sobic002G073800--Sobic001G304400 Sobic009G176000 Sobic009G176000 Sobic002G073800--Sobic009G176000 Sobic002G356400 Sobic002G356400 Sobic002G073800--Sobic002G356400 Sobic001G034700 Sobic001G034700 Sobic002G073800--Sobic001G034700 Sobic008G129400 Sobic008G129400 Sobic010G018400--Sobic008G129400 Sobic003G368500 Sobic003G368500 Sobic010G018400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic010G018400--Sobic003G155400 Sobic010G018400--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic010G018400--Sobic007G051000 Sobic010G154700 Sobic010G154700 Sobic010G018400--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic010G018400--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic010G018400--Sobic001G048832 Sobic001G445800 Sobic001G445800 Sobic010G018400--Sobic001G445800 Sobic001G286200 Sobic001G286200 Sobic009G212200--Sobic001G286200 Sobic003G215700 Sobic003G215700 Sobic009G212200--Sobic003G215700 Sobic009G212200--Sobic001G304400 Sobic003G443300 Sobic003G443300 Sobic009G212200--Sobic003G443300 Sobic009G212200--Sobic002G356400 Sobic010G264300 Sobic010G264300 Sobic009G212200--Sobic010G264300 Sobic001G134400 Sobic001G134400 Sobic009G212200--Sobic001G134400 Sobic003G249700 Sobic003G249700 Sobic009G212200--Sobic003G249700 Sobic009G076400 Sobic009G076400 Sobic009G212200--Sobic009G076400 Sobic008G127500--Sobic010G018400 Sobic010G054200 Sobic010G054200 Sobic008G127500--Sobic010G054200 Sobic008G127500--Sobic001G304400 Sobic007G177200 Sobic007G177200 Sobic008G127500--Sobic007G177200 Sobic010G065400 Sobic010G065400 Sobic008G127500--Sobic010G065400 Sobic003G129800 Sobic003G129800 Sobic008G127500--Sobic003G129800 Sobic008G127500--Sobic003G368500 Sobic001G058900 Sobic001G058900 Sobic008G127500--Sobic001G058900 Sobic001G172000 Sobic001G172000 Sobic008G127500--Sobic001G172000 Sobic009G062000--Sobic001G304400 Sobic009G062000--Sobic001G095632 Sobic009G062000--Sobic008G129400 Sobic001G432000 Sobic001G432000 Sobic009G062000--Sobic001G432000 Sobic009G062000--Sobic010G018400 Sobic004G351500 Sobic004G351500 Sobic009G062000--Sobic004G351500 Sobic003G305100 Sobic003G305100 Sobic009G062000--Sobic003G305100 Sobic009G062000--Sobic001G286200 Sobic009G062000--Sobic002G073800 Sobic001G095632--Sobic009G062000 Sobic001G095632--Sobic001G286200 Sobic004G060500 Sobic004G060500 Sobic001G095632--Sobic004G060500 Sobic001G095632--Sobic001G304400 Sobic001G095632--Sobic010G264300 Sobic002G078300 Sobic002G078300 Sobic001G095632--Sobic002G078300 Sobic001G095632--Sobic008G129400 Sobic001G095632--Sobic003G305100 Sobic001G095632--Sobic002G356400 Sobic001G304400--Sobic003G443300 Sobic001G304400--Sobic001G432000 Sobic001G304400--Sobic001G286200 Sobic001G304400--Sobic003G249700 Sobic001G304400--Sobic009G212200 Sobic007G019400 Sobic007G019400 Sobic001G304400--Sobic007G019400 Sobic002G304900 Sobic002G304900 Sobic001G304400--Sobic002G304900 Sobic003G150000 Sobic003G150000 Sobic001G304400--Sobic003G150000 Sobic001G304400--Sobic009G062000 Sobic002G398901 Sobic002G398901 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic006G083500 Sobic006G083500 Sobic009G176000--Sobic006G083500 Sobic010G012500 Sobic010G012500 Sobic009G176000--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic009G176000--Sobic004G211833 Sobic002G190900 Sobic002G190900 Sobic009G176000--Sobic002G190900 Sobic009G176000--Sobic004G060500 Sobic002G418400 Sobic002G418400 Sobic009G176000--Sobic002G418400 Sobic009G176000--Sobic003G215700 Sobic002G309700 Sobic002G309700 Sobic002G356400--Sobic002G309700 Sobic001G465800 Sobic001G465800 Sobic002G356400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic002G356400--Sobic009G119900 Sobic001G350600 Sobic001G350600 Sobic002G356400--Sobic001G350600 Sobic004G170400 Sobic004G170400 Sobic002G356400--Sobic004G170400 Sobic004G260200 Sobic004G260200 Sobic002G356400--Sobic004G260200 Sobic001G404800 Sobic001G404800 Sobic002G356400--Sobic001G404800 Sobic004G259200 Sobic004G259200 Sobic002G356400--Sobic004G259200 Sobic003G209000 Sobic003G209000 Sobic002G356400--Sobic003G209000 Sobic010G041600 Sobic010G041600 Sobic001G034700--Sobic010G041600 Sobic001G086300 Sobic001G086300 Sobic001G034700--Sobic001G086300 Sobic001G034700--Sobic001G048832 Sobic001G034700--Sobic009G176000 Sobic001G034700--Sobic007G051000 Sobic005G188100 Sobic005G188100 Sobic001G034700--Sobic005G188100 Sobic003G285800 Sobic003G285800 Sobic001G034700--Sobic003G285800 Sobic010G178200 Sobic010G178200 Sobic001G034700--Sobic010G178200 Sobic001G034700--Sobic003G150000
Octagon: transcription factors


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