Gene annotation
Transcriptome id Sobic.004G099900.1
Synonym Sb04g008090
Functional annotation early nodulin 93 ENOD93 protein, putative, expressed
UniProt C5XYI1
Pfam PF03386
Panther DB PTHR33605
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25940 : early nodulin-related
RAP-DB (Rice) LOC_Os02g13380.1 : early nodulin 93 ENOD93 protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G099900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
2 Sobic.001G478000 CutA, chloroplast precursor, putative, expressed K03926: periplasmic divalent cation tolerance protein
3 Sobic.001G388600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
4 Sobic.003G244200 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
5 Sobic.007G100425 - -
6 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
7 Sobic.010G103900 ribosomal protein L51, putative, expressed K17424: large subunit ribosomal protein L43
8 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
9 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
10 Sobic.003G254300 peroxiredoxin, putative, expressed -
11 Sobic.004G216800 h/ACA ribonucleoprotein complex subunit 3, putative, expressed K11130: NOP10, H/ACA ribonucleoprotein complex subunit 3
12 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
13 Sobic.010G044200 GLTP domain containing protein, putative, expressed -
14 Sobic.002G406200 expressed protein -
15 Sobic.001G116700 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
16 Sobic.001G304400 expressed protein -
17 Sobic.001G074300 40S ribosomal protein S29, putative, expressed K02980: RP-S29e, small subunit ribosomal protein S29e
18 Sobic.009G093200 superoxide dismutase, mitochondrial precursor, putative, expressed K04564: superoxide dismutase, Fe-Mn family
19 Sobic.004G085200 protein of unknown function domain containing protein, expressed -
20 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2


Gene co-expression network
sample Sobic004G099900 Sobic004G099900 Sobic002G073800 Sobic002G073800 Sobic004G099900--Sobic002G073800 Sobic001G478000 Sobic001G478000 Sobic004G099900--Sobic001G478000 Sobic001G388600 Sobic001G388600 Sobic004G099900--Sobic001G388600 Sobic003G244200 Sobic003G244200 Sobic004G099900--Sobic003G244200 Sobic007G100425 Sobic007G100425 Sobic004G099900--Sobic007G100425 Sobic003G216500 Sobic003G216500 Sobic004G099900--Sobic003G216500 Sobic010G103900 Sobic010G103900 Sobic004G099900--Sobic010G103900 Sobic010G018400 Sobic010G018400 Sobic004G099900--Sobic010G018400 Sobic001G005900 Sobic001G005900 Sobic004G099900--Sobic001G005900 Sobic002G073800--Sobic010G018400 Sobic009G212200 Sobic009G212200 Sobic002G073800--Sobic009G212200 Sobic008G127500 Sobic008G127500 Sobic002G073800--Sobic008G127500 Sobic009G062000 Sobic009G062000 Sobic002G073800--Sobic009G062000 Sobic001G095632 Sobic001G095632 Sobic002G073800--Sobic001G095632 Sobic001G304400 Sobic001G304400 Sobic002G073800--Sobic001G304400 Sobic009G176000 Sobic009G176000 Sobic002G073800--Sobic009G176000 Sobic002G356400 Sobic002G356400 Sobic002G073800--Sobic002G356400 Sobic001G034700 Sobic001G034700 Sobic002G073800--Sobic001G034700 Sobic009G240900 Sobic009G240900 Sobic001G478000--Sobic009G240900 Sobic009G144300 Sobic009G144300 Sobic001G478000--Sobic009G144300 Sobic001G478000--Sobic001G388600 Sobic007G076300 Sobic007G076300 Sobic001G478000--Sobic007G076300 Sobic002G255100 Sobic002G255100 Sobic001G478000--Sobic002G255100 Sobic004G138800 Sobic004G138800 Sobic001G478000--Sobic004G138800 Sobic004G216800 Sobic004G216800 Sobic001G478000--Sobic004G216800 Sobic001G096100 Sobic001G096100 Sobic001G478000--Sobic001G096100 Sobic009G227400 Sobic009G227400 Sobic001G478000--Sobic009G227400 Sobic001G388600--Sobic001G478000 Sobic004G130100 Sobic004G130100 Sobic001G388600--Sobic004G130100 Sobic004G327300 Sobic004G327300 Sobic001G388600--Sobic004G327300 Sobic002G363100 Sobic002G363100 Sobic001G388600--Sobic002G363100 Sobic002G371100 Sobic002G371100 Sobic001G388600--Sobic002G371100 Sobic001G388600--Sobic001G005900 Sobic001G388600--Sobic004G099900 Sobic007G152400 Sobic007G152400 Sobic001G388600--Sobic007G152400 Sobic001G388600--Sobic003G216500 Sobic006G002201 Sobic006G002201 Sobic003G244200--Sobic006G002201 Sobic009G093200 Sobic009G093200 Sobic003G244200--Sobic009G093200 Sobic005G133900 Sobic005G133900 Sobic003G244200--Sobic005G133900 Sobic007G161200 Sobic007G161200 Sobic003G244200--Sobic007G161200 Sobic003G244200--Sobic003G216500 Sobic003G244200--Sobic002G363100 Sobic003G244200--Sobic004G099900 Sobic010G180400 Sobic010G180400 Sobic003G244200--Sobic010G180400 Sobic004G082900 Sobic004G082900 Sobic003G244200--Sobic004G082900 Sobic007G100425--Sobic004G216800 Sobic004G224900 Sobic004G224900 Sobic007G100425--Sobic004G224900 Sobic008G132400 Sobic008G132400 Sobic007G100425--Sobic008G132400 Sobic001G074300 Sobic001G074300 Sobic007G100425--Sobic001G074300 Sobic001G048832 Sobic001G048832 Sobic007G100425--Sobic001G048832 Sobic007G100425--Sobic001G005900 Sobic007G100425--Sobic004G138800 Sobic003G063300 Sobic003G063300 Sobic007G100425--Sobic003G063300 Sobic002G364500 Sobic002G364500 Sobic007G100425--Sobic002G364500 Sobic002G410700 Sobic002G410700 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic009G240700 Sobic009G240700 Sobic003G216500--Sobic009G240700 Sobic001G473400 Sobic001G473400 Sobic003G216500--Sobic001G473400 Sobic003G170300 Sobic003G170300 Sobic003G216500--Sobic003G170300 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic006G020900 Sobic006G020900 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic004G085200 Sobic004G085200 Sobic010G103900--Sobic004G085200 Sobic010G103900--Sobic002G371100 Sobic001G481700 Sobic001G481700 Sobic010G103900--Sobic001G481700 Sobic010G103900--Sobic001G005900 Sobic002G364100 Sobic002G364100 Sobic010G103900--Sobic002G364100 Sobic009G022400 Sobic009G022400 Sobic010G103900--Sobic009G022400 Sobic010G103900--Sobic002G255100 Sobic010G103900--Sobic002G364500 Sobic003G196800 Sobic003G196800 Sobic010G103900--Sobic003G196800 Sobic008G129400 Sobic008G129400 Sobic010G018400--Sobic008G129400 Sobic003G368500 Sobic003G368500 Sobic010G018400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic010G018400--Sobic003G155400 Sobic010G018400--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic010G018400--Sobic007G051000 Sobic010G154700 Sobic010G154700 Sobic010G018400--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic010G018400--Sobic001G132100 Sobic010G018400--Sobic001G048832 Sobic001G445800 Sobic001G445800 Sobic010G018400--Sobic001G445800 Sobic009G198500 Sobic009G198500 Sobic001G005900--Sobic009G198500 Sobic001G005900--Sobic004G327300 Sobic004G300900 Sobic004G300900 Sobic001G005900--Sobic004G300900 Sobic001G005900--Sobic001G048832 Sobic002G078400 Sobic002G078400 Sobic001G005900--Sobic002G078400 Sobic001G502200 Sobic001G502200 Sobic001G005900--Sobic001G502200 Sobic004G130900 Sobic004G130900 Sobic001G005900--Sobic004G130900 Sobic007G096700 Sobic007G096700 Sobic001G005900--Sobic007G096700 Sobic001G501200 Sobic001G501200 Sobic001G005900--Sobic001G501200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.