Gene annotation
Transcriptome id Sobic.010G103900.1
Synonym Sb10g009060
Functional annotation ribosomal protein L51, putative, expressed
UniProt C5Z7Y2
Pfam PF05047
Panther DB PTHR21396
NCBI CDD KOG3445; Mitochondrial/chloroplast ribosomal protein 36a
KEGG Orthology K17424; large subunit ribosomal protein L43
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G59650 : mitochondrial ribosomal protein L51/S25/CI-B8 family protein
RAP-DB (Rice) LOC_Os03g10930.1 : ribosomal protein L51, putative, expressed
MaizeGDB (Corn) Zm00025a053128 , Zm00025a001110
Brachypodium PNT77939
Barley -
Wheat TraesCS4B02G254900 , TraesCS3B02G178400 , TraesCS4A02G049800 , TraesCS4D02G254700
Populus -


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cDNA sequences
Sobic.010G103900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G085200 protein of unknown function domain containing protein, expressed -
2 Sobic.002G371100 40S ribosomal protein S3-1, putative, expressed K02985: RP-S3e, small subunit ribosomal protein S3e
3 Sobic.001G481700 eukaryotic translation initiation factor 3 subunit K, putative, expressed K15028: translation initiation factor 3 subunit K
4 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
5 Sobic.002G364100 40S ribosomal protein S3a, putative, expressed K02984: RP-S3Ae, small subunit ribosomal protein S3Ae
6 Sobic.009G022400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
7 Sobic.002G255100 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
8 Sobic.002G364500 40S ribosomal protein S3a, putative, expressed K02984: RP-S3Ae, small subunit ribosomal protein S3Ae
9 Sobic.003G196800 60S ribosomal protein L19-3, putative, expressed K02885: RP-L19e, large subunit ribosomal protein L19e
10 Sobic.004G216800 h/ACA ribonucleoprotein complex subunit 3, putative, expressed K11130: NOP10, H/ACA ribonucleoprotein complex subunit 3
11 Sobic.003G308000 expressed protein K15902: PCC1, EKC/KEOPS complex subunit PCC1/LAGE3
12 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
13 Sobic.010G013900 DAG protein, chloroplast precursor, putative, expressed -
14 Sobic.004G094200 elongation factor 1-gamma, putative, expressed K03233: elongation factor 1-gamma
15 Sobic.003G025200 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
16 Sobic.007G071300 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
17 Sobic.004G213200 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
18 Sobic.010G100000 S4 domain containing protein, putative, expressed K14560: U3 small nucleolar ribonucleoprotein protein IMP3
19 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
20 Sobic.001G018800 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e


Gene co-expression network
sample Sobic010G103900 Sobic010G103900 Sobic004G085200 Sobic004G085200 Sobic010G103900--Sobic004G085200 Sobic002G371100 Sobic002G371100 Sobic010G103900--Sobic002G371100 Sobic001G481700 Sobic001G481700 Sobic010G103900--Sobic001G481700 Sobic001G005900 Sobic001G005900 Sobic010G103900--Sobic001G005900 Sobic002G364100 Sobic002G364100 Sobic010G103900--Sobic002G364100 Sobic009G022400 Sobic009G022400 Sobic010G103900--Sobic009G022400 Sobic002G255100 Sobic002G255100 Sobic010G103900--Sobic002G255100 Sobic002G364500 Sobic002G364500 Sobic010G103900--Sobic002G364500 Sobic003G196800 Sobic003G196800 Sobic010G103900--Sobic003G196800 Sobic004G085200--Sobic002G364100 Sobic004G085200--Sobic010G103900 Sobic003G025200 Sobic003G025200 Sobic004G085200--Sobic003G025200 Sobic004G085200--Sobic002G364500 Sobic004G085200--Sobic009G022400 Sobic002G049300 Sobic002G049300 Sobic004G085200--Sobic002G049300 Sobic004G198500 Sobic004G198500 Sobic004G085200--Sobic004G198500 Sobic006G260400 Sobic006G260400 Sobic004G085200--Sobic006G260400 Sobic004G322200 Sobic004G322200 Sobic004G085200--Sobic004G322200 Sobic001G018800 Sobic001G018800 Sobic002G371100--Sobic001G018800 Sobic008G073300 Sobic008G073300 Sobic002G371100--Sobic008G073300 Sobic001G025600 Sobic001G025600 Sobic002G371100--Sobic001G025600 Sobic002G371100--Sobic002G255100 Sobic002G371100--Sobic002G049300 Sobic004G103700 Sobic004G103700 Sobic002G371100--Sobic004G103700 Sobic003G308000 Sobic003G308000 Sobic002G371100--Sobic003G308000 Sobic004G002350 Sobic004G002350 Sobic002G371100--Sobic004G002350 Sobic009G227400 Sobic009G227400 Sobic002G371100--Sobic009G227400 Sobic001G481700--Sobic001G025600 Sobic004G224900 Sobic004G224900 Sobic001G481700--Sobic004G224900 Sobic010G100000 Sobic010G100000 Sobic001G481700--Sobic010G100000 Sobic002G341800 Sobic002G341800 Sobic001G481700--Sobic002G341800 Sobic001G404100 Sobic001G404100 Sobic001G481700--Sobic001G404100 Sobic007G220900 Sobic007G220900 Sobic001G481700--Sobic007G220900 Sobic009G104100 Sobic009G104100 Sobic001G481700--Sobic009G104100 Sobic001G458700 Sobic001G458700 Sobic001G481700--Sobic001G458700 Sobic007G176200 Sobic007G176200 Sobic001G481700--Sobic007G176200 Sobic009G198500 Sobic009G198500 Sobic001G005900--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic001G005900--Sobic004G327300 Sobic004G300900 Sobic004G300900 Sobic001G005900--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic001G005900--Sobic001G048832 Sobic002G078400 Sobic002G078400 Sobic001G005900--Sobic002G078400 Sobic001G502200 Sobic001G502200 Sobic001G005900--Sobic001G502200 Sobic004G130900 Sobic004G130900 Sobic001G005900--Sobic004G130900 Sobic007G096700 Sobic007G096700 Sobic001G005900--Sobic007G096700 Sobic001G501200 Sobic001G501200 Sobic001G005900--Sobic001G501200 Sobic002G364100--Sobic002G364500 Sobic001G046300 Sobic001G046300 Sobic002G364100--Sobic001G046300 Sobic009G163800 Sobic009G163800 Sobic002G364100--Sobic009G163800 Sobic002G364100--Sobic006G260400 Sobic002G364100--Sobic009G022400 Sobic010G182600 Sobic010G182600 Sobic002G364100--Sobic010G182600 Sobic001G091801 Sobic001G091801 Sobic002G364100--Sobic001G091801 Sobic010G166100 Sobic010G166100 Sobic002G364100--Sobic010G166100 Sobic004G331400 Sobic004G331400 Sobic002G364100--Sobic004G331400 Sobic009G022400--Sobic002G049300 Sobic007G178600 Sobic007G178600 Sobic009G022400--Sobic007G178600 Sobic001G085400 Sobic001G085400 Sobic009G022400--Sobic001G085400 Sobic001G175300 Sobic001G175300 Sobic009G022400--Sobic001G175300 Sobic006G221200 Sobic006G221200 Sobic009G022400--Sobic006G221200 Sobic009G022400--Sobic009G163800 Sobic003G280700 Sobic003G280700 Sobic009G022400--Sobic003G280700 Sobic008G108601 Sobic008G108601 Sobic009G022400--Sobic008G108601 Sobic004G104100 Sobic004G104100 Sobic009G022400--Sobic004G104100 Sobic002G255100--Sobic009G227400 Sobic009G144300 Sobic009G144300 Sobic002G255100--Sobic009G144300 Sobic001G334300 Sobic001G334300 Sobic002G255100--Sobic001G334300 Sobic002G255100--Sobic001G085400 Sobic002G255100--Sobic002G049300 Sobic002G304900 Sobic002G304900 Sobic002G255100--Sobic002G304900 Sobic010G023900 Sobic010G023900 Sobic002G255100--Sobic010G023900 Sobic009G233400 Sobic009G233400 Sobic002G255100--Sobic009G233400 Sobic004G216800 Sobic004G216800 Sobic002G255100--Sobic004G216800 Sobic002G364500--Sobic002G364100 Sobic003G363800 Sobic003G363800 Sobic002G364500--Sobic003G363800 Sobic002G364500--Sobic001G046300 Sobic002G364500--Sobic001G085400 Sobic001G011200 Sobic001G011200 Sobic002G364500--Sobic001G011200 Sobic002G364500--Sobic001G091801 Sobic002G364500--Sobic009G163800 Sobic001G436200 Sobic001G436200 Sobic002G364500--Sobic001G436200 Sobic002G364500--Sobic010G182600 Sobic005G027300 Sobic005G027300 Sobic003G196800--Sobic005G027300 Sobic009G212300 Sobic009G212300 Sobic003G196800--Sobic009G212300 Sobic001G096100 Sobic001G096100 Sobic003G196800--Sobic001G096100 Sobic003G196800--Sobic002G341800 Sobic003G196800--Sobic001G481700 Sobic010G114700 Sobic010G114700 Sobic003G196800--Sobic010G114700 Sobic009G234400 Sobic009G234400 Sobic003G196800--Sobic009G234400 Sobic006G002201 Sobic006G002201 Sobic003G196800--Sobic006G002201 Sobic007G061400 Sobic007G061400 Sobic003G196800--Sobic007G061400
Octagon: transcription factors


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