Gene annotation
Transcriptome id Sobic.003G244200.1
Synonym TUFF, emb2448, Sb03g030060, VHA-E1, TUF
Functional annotation vacuolar ATP synthase subunit E, putative, expressed
UniProt C5XFB9
Pfam PF01991
Panther DB PTHR12317 PTHR12317:SF18
NCBI CDD KOG1664; Vacuolar H+-ATPase V1 sector, subunit E
KEGG Orthology K02150; ATPeV1E, V-type H+-transporting ATPase subunit E
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT4G11150 : vacuolar ATP synthase subunit E1
RAP-DB (Rice) LOC_Os01g46980.1 : vacuolar ATP synthase subunit E, putative, expressed
MaizeGDB (Corn) Zm00025a038713 , Zm00025a028174
Brachypodium KQK09023
Barley HORVU3Hr1G059320.4 , HORVU3Hr1G059320.5 , HORVU3Hr1G059320.2 , HORVU3Hr1G059320.3 , HORVU3Hr1G059320.1
Wheat TraesCS3D02G239100 , TraesCS3B02G267400 , TraesCS3B02G267400 , TraesCS3A02G238700
Populus -


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cDNA sequences
Sobic.003G244200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G002201 - -
2 Sobic.009G093200 superoxide dismutase, mitochondrial precursor, putative, expressed K04564: superoxide dismutase, Fe-Mn family
3 Sobic.005G133900 TPR repeat region family protein, expressed -
4 Sobic.007G161200 expressed protein -
5 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
6 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
7 Sobic.004G099900 early nodulin 93 ENOD93 protein, putative, expressed -
8 Sobic.010G180400 Fatty acyl-ACP thioesterases B FATB (At)(PubMedID : 27208977)@myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
9 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
10 Sobic.001G173500 - -
11 Sobic.001G096300 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
12 Sobic.001G478000 CutA, chloroplast precursor, putative, expressed K03926: periplasmic divalent cation tolerance protein
13 Sobic.001G447600 squalene monooxygenase, putative, expressed K00511: SQLE, squalene monooxygenase
14 Sobic.003G203500 "cinnamoyl-CoA reductase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
15 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.007G069200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
17 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
18 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
19 Sobic.003G261400 DUF292 domain containing protein, expressed -
20 Sobic.005G105500 expressed protein -


Gene co-expression network
sample Sobic003G244200 Sobic003G244200 Sobic006G002201 Sobic006G002201 Sobic003G244200--Sobic006G002201 Sobic009G093200 Sobic009G093200 Sobic003G244200--Sobic009G093200 Sobic005G133900 Sobic005G133900 Sobic003G244200--Sobic005G133900 Sobic007G161200 Sobic007G161200 Sobic003G244200--Sobic007G161200 Sobic003G216500 Sobic003G216500 Sobic003G244200--Sobic003G216500 Sobic002G363100 Sobic002G363100 Sobic003G244200--Sobic002G363100 Sobic004G099900 Sobic004G099900 Sobic003G244200--Sobic004G099900 Sobic010G180400 Sobic010G180400 Sobic003G244200--Sobic010G180400 Sobic004G082900 Sobic004G082900 Sobic003G244200--Sobic004G082900 Sobic003G103400 Sobic003G103400 Sobic006G002201--Sobic003G103400 Sobic007G061400 Sobic007G061400 Sobic006G002201--Sobic007G061400 Sobic005G105500 Sobic005G105500 Sobic006G002201--Sobic005G105500 Sobic004G291400 Sobic004G291400 Sobic006G002201--Sobic004G291400 Sobic005G111900 Sobic005G111900 Sobic006G002201--Sobic005G111900 Sobic003G196800 Sobic003G196800 Sobic006G002201--Sobic003G196800 Sobic001G468600 Sobic001G468600 Sobic006G002201--Sobic001G468600 Sobic001G458700 Sobic001G458700 Sobic006G002201--Sobic001G458700 Sobic004G124100 Sobic004G124100 Sobic006G002201--Sobic004G124100 Sobic003G428200 Sobic003G428200 Sobic009G093200--Sobic003G428200 Sobic009G093200--Sobic003G244200 Sobic006G203100 Sobic006G203100 Sobic009G093200--Sobic006G203100 Sobic010G044200 Sobic010G044200 Sobic009G093200--Sobic010G044200 Sobic010G073100 Sobic010G073100 Sobic009G093200--Sobic010G073100 Sobic002G423800 Sobic002G423800 Sobic009G093200--Sobic002G423800 Sobic001G338400 Sobic001G338400 Sobic009G093200--Sobic001G338400 Sobic006G211800 Sobic006G211800 Sobic009G093200--Sobic006G211800 Sobic001G478000 Sobic001G478000 Sobic009G093200--Sobic001G478000 Sobic005G133900--Sobic002G363100 Sobic004G057200 Sobic004G057200 Sobic005G133900--Sobic004G057200 Sobic005G133900--Sobic003G244200 Sobic001G357300 Sobic001G357300 Sobic005G133900--Sobic001G357300 Sobic005G133900--Sobic009G093200 Sobic005G133900--Sobic003G216500 Sobic002G133800 Sobic002G133800 Sobic005G133900--Sobic002G133800 Sobic005G133900--Sobic006G002201 Sobic009G240900 Sobic009G240900 Sobic005G133900--Sobic009G240900 Sobic004G060100 Sobic004G060100 Sobic007G161200--Sobic004G060100 Sobic003G200800 Sobic003G200800 Sobic007G161200--Sobic003G200800 Sobic005G018800 Sobic005G018800 Sobic007G161200--Sobic005G018800 Sobic009G256000 Sobic009G256000 Sobic007G161200--Sobic009G256000 Sobic004G347600 Sobic004G347600 Sobic007G161200--Sobic004G347600 Sobic008G021200 Sobic008G021200 Sobic007G161200--Sobic008G021200 Sobic001G115700 Sobic001G115700 Sobic007G161200--Sobic001G115700 Sobic008G150300 Sobic008G150300 Sobic007G161200--Sobic008G150300 Sobic004G283600 Sobic004G283600 Sobic007G161200--Sobic004G283600 Sobic002G410700 Sobic002G410700 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic009G240700 Sobic009G240700 Sobic003G216500--Sobic009G240700 Sobic001G473400 Sobic001G473400 Sobic003G216500--Sobic001G473400 Sobic003G170300 Sobic003G170300 Sobic003G216500--Sobic003G170300 Sobic002G073800 Sobic002G073800 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic006G020900 Sobic006G020900 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic002G363100--Sobic009G240900 Sobic001G040800 Sobic001G040800 Sobic002G363100--Sobic001G040800 Sobic009G001400 Sobic009G001400 Sobic002G363100--Sobic009G001400 Sobic002G363100--Sobic001G357300 Sobic007G114200 Sobic007G114200 Sobic002G363100--Sobic007G114200 Sobic009G217900 Sobic009G217900 Sobic002G363100--Sobic009G217900 Sobic001G005900 Sobic001G005900 Sobic002G363100--Sobic001G005900 Sobic004G130100 Sobic004G130100 Sobic002G363100--Sobic004G130100 Sobic004G327300 Sobic004G327300 Sobic002G363100--Sobic004G327300 Sobic004G099900--Sobic002G073800 Sobic004G099900--Sobic001G478000 Sobic001G388600 Sobic001G388600 Sobic004G099900--Sobic001G388600 Sobic004G099900--Sobic003G244200 Sobic007G100425 Sobic007G100425 Sobic004G099900--Sobic007G100425 Sobic004G099900--Sobic003G216500 Sobic010G103900 Sobic010G103900 Sobic004G099900--Sobic010G103900 Sobic010G018400 Sobic010G018400 Sobic004G099900--Sobic010G018400 Sobic004G099900--Sobic001G005900 Sobic010G180400--Sobic003G244200 Sobic010G024100 Sobic010G024100 Sobic010G180400--Sobic010G024100 Sobic009G234300 Sobic009G234300 Sobic010G180400--Sobic009G234300 Sobic008G051900 Sobic008G051900 Sobic010G180400--Sobic008G051900 Sobic010G180400--Sobic005G133900 Sobic002G306900 Sobic002G306900 Sobic010G180400--Sobic002G306900 Sobic010G180400--Sobic003G216500 Sobic001G307900 Sobic001G307900 Sobic010G180400--Sobic001G307900 Sobic010G180400--Sobic007G161200 Sobic006G252200 Sobic006G252200 Sobic004G082900--Sobic006G252200 Sobic001G283200 Sobic001G283200 Sobic004G082900--Sobic001G283200 Sobic004G082900--Sobic001G458700 Sobic004G010900 Sobic004G010900 Sobic004G082900--Sobic004G010900 Sobic007G176200 Sobic007G176200 Sobic004G082900--Sobic007G176200 Sobic004G082900--Sobic005G105500 Sobic001G145500 Sobic001G145500 Sobic004G082900--Sobic001G145500 Sobic009G149500 Sobic009G149500 Sobic004G082900--Sobic009G149500 Sobic001G444300 Sobic001G444300 Sobic004G082900--Sobic001G444300
Octagon: transcription factors


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