Gene annotation
Transcriptome id Sobic.001G230100.1
Synonym PKT3, Sb01g020150, PED1, KAT2
Functional annotation 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed
UniProt C5WZG9
Pfam PF02803 PF00108
Panther DB PTHR18919 PTHR18919:SF100
NCBI CDD -
KEGG Orthology K07513; acetyl-CoA acyltransferase 1
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G33150 : peroxisomal 3-ketoacyl-CoA thiolase 3
RAP-DB (Rice) LOC_Os10g31950.1 : 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed
MaizeGDB (Corn) Zm00025a017690
Brachypodium KQJ96958 , PNT67489
Barley HORVU1Hr1G038330.18 , HORVU1Hr1G038330.19 , HORVU1Hr1G038330.14 , HORVU1Hr1G038330.15 , HORVU1Hr1G038330.16 , HORVU1Hr1G038330.17 , HORVU1Hr1G038330.10 , HORVU1Hr1G038330.11 , HORVU1Hr1G038330.12 , HORVU1Hr1G038330.13 , HORVU1Hr1G038330.6 , HORVU1Hr1G038330.7 , HORVU1Hr1G038330.4 , HORVU1Hr1G038330.5 , HORVU1Hr1G038330.2 , HORVU1Hr1G038330.3 , HORVU1Hr1G038330.1 , HORVU1Hr1G038330.8 , HORVU1Hr1G038330.9 , HORVU1Hr1G038330.21 , HORVU1Hr1G038330.20
Wheat TraesCS1A02G143900 , TraesCS1A02G143900 , TraesCS1B02G161300 , TraesCS1D02G142700
Populus -


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cDNA sequences
Sobic.001G230100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.001G110400 - -
3 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
4 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
5 Sobic.008G088830 - -
6 Sobic.009G229300 glycosyltransferase family 43 protein, putative, expressed -
7 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
8 Sobic.009G104000 ranBP1 domain containing protein, expressed K15306: Ran-binding protein 1
9 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
10 Sobic.003G203500 "cinnamoyl-CoA reductase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
11 Sobic.010G067500 OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.009G067000 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
13 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
14 Sobic.007G132700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM motif family protein, expressed K13464: jasmonate ZIM domain-containing protein
15 Sobic.005G105500 expressed protein -
16 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
17 Sobic.008G129300 CPuORF5 - conserved peptide uORF-containing transcript, expressed -
18 Sobic.008G178800 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
19 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
20 Sobic.010G279000 expressed protein -


Gene co-expression network
sample Sobic001G230100 Sobic001G230100 Sobic001G338400 Sobic001G338400 Sobic001G230100--Sobic001G338400 Sobic001G110400 Sobic001G110400 Sobic001G230100--Sobic001G110400 Sobic003G348800 Sobic003G348800 Sobic001G230100--Sobic003G348800 Sobic001G007600 Sobic001G007600 Sobic001G230100--Sobic001G007600 Sobic008G088830 Sobic008G088830 Sobic001G230100--Sobic008G088830 Sobic009G229300 Sobic009G229300 Sobic001G230100--Sobic009G229300 Sobic001G281900 Sobic001G281900 Sobic001G230100--Sobic001G281900 Sobic009G104000 Sobic009G104000 Sobic001G230100--Sobic009G104000 Sobic004G082900 Sobic004G082900 Sobic001G230100--Sobic004G082900 Sobic001G338400--Sobic003G348800 Sobic008G150300 Sobic008G150300 Sobic001G338400--Sobic008G150300 Sobic001G338400--Sobic001G281900 Sobic001G145500 Sobic001G145500 Sobic001G338400--Sobic001G145500 Sobic004G010900 Sobic004G010900 Sobic001G338400--Sobic004G010900 Sobic001G490500 Sobic001G490500 Sobic001G338400--Sobic001G490500 Sobic001G338400--Sobic001G230100 Sobic002G342500 Sobic002G342500 Sobic001G338400--Sobic002G342500 Sobic006G029000 Sobic006G029000 Sobic001G338400--Sobic006G029000 Sobic006G002700 Sobic006G002700 Sobic001G110400--Sobic006G002700 Sobic001G110400--Sobic001G230100 Sobic001G110400--Sobic001G007600 Sobic001G110400--Sobic009G104000 Sobic006G252200 Sobic006G252200 Sobic001G110400--Sobic006G252200 Sobic010G038700 Sobic010G038700 Sobic001G110400--Sobic010G038700 Sobic004G224900 Sobic004G224900 Sobic001G110400--Sobic004G224900 Sobic001G005900 Sobic001G005900 Sobic001G110400--Sobic001G005900 Sobic001G021300 Sobic001G021300 Sobic001G110400--Sobic001G021300 Sobic003G348800--Sobic001G338400 Sobic003G348800--Sobic001G281900 Sobic003G348800--Sobic002G342500 Sobic003G348800--Sobic001G230100 Sobic001G220900 Sobic001G220900 Sobic003G348800--Sobic001G220900 Sobic004G160200 Sobic004G160200 Sobic003G348800--Sobic004G160200 Sobic001G109300 Sobic001G109300 Sobic003G348800--Sobic001G109300 Sobic004G257000 Sobic004G257000 Sobic003G348800--Sobic004G257000 Sobic003G348800--Sobic008G150300 Sobic004G138800 Sobic004G138800 Sobic001G007600--Sobic004G138800 Sobic009G067000 Sobic009G067000 Sobic001G007600--Sobic009G067000 Sobic001G418900 Sobic001G418900 Sobic001G007600--Sobic001G418900 Sobic003G443300 Sobic003G443300 Sobic001G007600--Sobic003G443300 Sobic001G505500 Sobic001G505500 Sobic001G007600--Sobic001G505500 Sobic003G368500 Sobic003G368500 Sobic001G007600--Sobic003G368500 Sobic001G007600--Sobic006G252200 Sobic009G182300 Sobic009G182300 Sobic001G007600--Sobic009G182300 Sobic007G076300 Sobic007G076300 Sobic001G007600--Sobic007G076300 Sobic008G088830--Sobic001G230100 Sobic006G281500 Sobic006G281500 Sobic008G088830--Sobic006G281500 Sobic004G132300 Sobic004G132300 Sobic008G088830--Sobic004G132300 Sobic010G002400 Sobic010G002400 Sobic008G088830--Sobic010G002400 Sobic003G400100 Sobic003G400100 Sobic008G088830--Sobic003G400100 Sobic003G273600 Sobic003G273600 Sobic008G088830--Sobic003G273600 Sobic008G088830--Sobic001G338400 Sobic008G088830--Sobic004G082900 Sobic006G280600 Sobic006G280600 Sobic008G088830--Sobic006G280600 Sobic008G003600 Sobic008G003600 Sobic009G229300--Sobic008G003600 Sobic001G512000 Sobic001G512000 Sobic009G229300--Sobic001G512000 Sobic009G229300--Sobic001G230100 Sobic003G052400 Sobic003G052400 Sobic009G229300--Sobic003G052400 Sobic010G105600 Sobic010G105600 Sobic009G229300--Sobic010G105600 Sobic001G237500 Sobic001G237500 Sobic009G229300--Sobic001G237500 Sobic002G131900 Sobic002G131900 Sobic009G229300--Sobic002G131900 Sobic004G337900 Sobic004G337900 Sobic009G229300--Sobic004G337900 Sobic002G362900 Sobic002G362900 Sobic009G229300--Sobic002G362900 Sobic003G330500 Sobic003G330500 Sobic001G281900--Sobic003G330500 Sobic005G105500 Sobic005G105500 Sobic001G281900--Sobic005G105500 Sobic001G281900--Sobic008G150300 Sobic001G281900--Sobic006G252200 Sobic001G196100 Sobic001G196100 Sobic001G281900--Sobic001G196100 Sobic001G458700 Sobic001G458700 Sobic001G281900--Sobic001G458700 Sobic007G176200 Sobic007G176200 Sobic001G281900--Sobic007G176200 Sobic001G281900--Sobic001G338400 Sobic001G096100 Sobic001G096100 Sobic001G281900--Sobic001G096100 Sobic001G404100 Sobic001G404100 Sobic009G104000--Sobic001G404100 Sobic010G008100 Sobic010G008100 Sobic009G104000--Sobic010G008100 Sobic009G104000--Sobic010G038700 Sobic001G440700 Sobic001G440700 Sobic009G104000--Sobic001G440700 Sobic001G502200 Sobic001G502200 Sobic009G104000--Sobic001G502200 Sobic007G132700 Sobic007G132700 Sobic009G104000--Sobic007G132700 Sobic001G067900 Sobic001G067900 Sobic009G104000--Sobic001G067900 Sobic010G062800 Sobic010G062800 Sobic009G104000--Sobic010G062800 Sobic009G179200 Sobic009G179200 Sobic009G104000--Sobic009G179200 Sobic004G082900--Sobic006G252200 Sobic001G283200 Sobic001G283200 Sobic004G082900--Sobic001G283200 Sobic004G082900--Sobic001G458700 Sobic004G082900--Sobic004G010900 Sobic004G082900--Sobic007G176200 Sobic004G082900--Sobic005G105500 Sobic004G082900--Sobic001G145500 Sobic009G149500 Sobic009G149500 Sobic004G082900--Sobic009G149500 Sobic001G444300 Sobic001G444300 Sobic004G082900--Sobic001G444300
Octagon: transcription factors


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