Gene annotation
Transcriptome id Sobic.010G067500.1,Sobic.010G067500.2
Synonym Sb10g005870, scpl29
Functional annotation OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A194YHP9 , A0A194YHR5
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF32
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT4G30810 : serine carboxypeptidase-like 29
RAP-DB (Rice) LOC_Os06g08720.1,LOC_Os06g08720.2 : OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a022455 , Zm00025a021039 , Zm00025a049742 , Zm00025a032080
Brachypodium KQK19241 , KQK19240 , KQK17647 , KQK00467 , KQJ83677 , KQK16604
Barley HORVU3Hr1G033560.2 , HORVU5Hr1G069460.1 , HORVU2Hr1G090490.10 , HORVU2Hr1G090490.11 , HORVU2Hr1G090490.12 , HORVU2Hr1G090490.17 , HORVU2Hr1G090490.18 , HORVU2Hr1G090490.19 , HORVU2Hr1G090490.21 , HORVU6Hr1G059550.4 , HORVU6Hr1G059550.5 , HORVU6Hr1G059550.6 , HORVU6Hr1G059550.7 , HORVU6Hr1G059550.1 , HORVU6Hr1G059550.2 , HORVU6Hr1G059550.3 , HORVU6Hr1G059550.8 , HORVU6Hr1G059550.9 , HORVU2Hr1G090490.2 , HORVU2Hr1G090490.1 , HORVU2Hr1G090490.7 , HORVU2Hr1G090490.4 , HORVU2Hr1G090490.5 , HORVU2Hr1G090490.8 , HORVU2Hr1G090490.9 , HORVU6Hr1G059550.12 , HORVU6Hr1G059550.10 , HORVU6Hr1G059550.11 , HORVU7Hr1G031020.3 , HORVU7Hr1G031020.2 , HORVU7Hr1G031020.7 , HORVU7Hr1G031020.6 , HORVU7Hr1G031020.5 , HORVU7Hr1G031020.4
Wheat TraesCS6B02G205500 , TraesCS3B02G198000 , TraesCS6D02G165200 , TraesCS6D02G165200 , TraesCS7D02G152800 , TraesCS7D02G152800 , TraesCS3D02G174500 , TraesCS6D02G215000 , TraesCS7B02G054900 , TraesCS7B02G054900 , TraesCS4A02G299900 , TraesCS7A02G150900 , TraesCS2B02G393300 , TraesCS7A02G507800 , TraesCS2D02G372500 , TraesCS6B02G261700 , TraesCS6B02G261700 , TraesCS6A02G179800 , TraesCS6A02G179800 , TraesCS7B02G301600 , TraesCS2D02G285600 , TraesCS6A02G220200 , TraesCS2D02G285600 , TraesCS7D02G395300 , TraesCS7B02G416000 , TraesCS4A02G300100 , TraesCS2A02G376300 , TraesCS6D02G165200 , TraesCS2A02G376300
Populus -


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cDNA sequences
Sobic.010G067500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G178800 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
2 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
3 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
4 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
5 Sobic.006G002700 OsRhmbd10 - Putative Rhomboid homologue, expressed -
6 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -
7 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
8 Sobic.009G125900 expressed protein -
9 Sobic.004G111100 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
11 Sobic.002G167000 "C3 PTPC, housekeeping gene"(PubMedID : 2308851)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
12 Sobic.006G038200 receptor protein kinase, putative, expressed -
13 Sobic.003G105000 kinase, pfkB family, putative, expressed -
14 Sobic.003G049900 - -
15 Sobic.006G008400 receptor protein kinase, putative, expressed -
16 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
17 Sobic.001G168600 serpin domain containing protein, putative, expressed K13963: serpin B
18 Sobic.003G099166 - -
19 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase
20 Sobic.009G236100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic010G067500 Sobic010G067500 Sobic008G178800 Sobic008G178800 Sobic010G067500--Sobic008G178800 Sobic001G230100 Sobic001G230100 Sobic010G067500--Sobic001G230100 Sobic003G348800 Sobic003G348800 Sobic010G067500--Sobic003G348800 Sobic009G017500 Sobic009G017500 Sobic010G067500--Sobic009G017500 Sobic006G002700 Sobic006G002700 Sobic010G067500--Sobic006G002700 Sobic003G254700 Sobic003G254700 Sobic010G067500--Sobic003G254700 Sobic007G047300 Sobic007G047300 Sobic010G067500--Sobic007G047300 Sobic009G125900 Sobic009G125900 Sobic010G067500--Sobic009G125900 Sobic004G111100 Sobic004G111100 Sobic010G067500--Sobic004G111100 Sobic006G038200 Sobic006G038200 Sobic008G178800--Sobic006G038200 Sobic009G063400 Sobic009G063400 Sobic008G178800--Sobic009G063400 Sobic010G258500 Sobic010G258500 Sobic008G178800--Sobic010G258500 Sobic002G347300 Sobic002G347300 Sobic008G178800--Sobic002G347300 Sobic008G178800--Sobic009G125900 Sobic004G282700 Sobic004G282700 Sobic008G178800--Sobic004G282700 Sobic009G232200 Sobic009G232200 Sobic008G178800--Sobic009G232200 Sobic008G178800--Sobic009G017500 Sobic008G178800--Sobic010G067500 Sobic001G338400 Sobic001G338400 Sobic001G230100--Sobic001G338400 Sobic001G110400 Sobic001G110400 Sobic001G230100--Sobic001G110400 Sobic001G230100--Sobic003G348800 Sobic001G007600 Sobic001G007600 Sobic001G230100--Sobic001G007600 Sobic008G088830 Sobic008G088830 Sobic001G230100--Sobic008G088830 Sobic009G229300 Sobic009G229300 Sobic001G230100--Sobic009G229300 Sobic001G281900 Sobic001G281900 Sobic001G230100--Sobic001G281900 Sobic009G104000 Sobic009G104000 Sobic001G230100--Sobic009G104000 Sobic004G082900 Sobic004G082900 Sobic001G230100--Sobic004G082900 Sobic003G348800--Sobic001G338400 Sobic003G348800--Sobic001G281900 Sobic002G342500 Sobic002G342500 Sobic003G348800--Sobic002G342500 Sobic003G348800--Sobic001G230100 Sobic001G220900 Sobic001G220900 Sobic003G348800--Sobic001G220900 Sobic004G160200 Sobic004G160200 Sobic003G348800--Sobic004G160200 Sobic001G109300 Sobic001G109300 Sobic003G348800--Sobic001G109300 Sobic004G257000 Sobic004G257000 Sobic003G348800--Sobic004G257000 Sobic008G150300 Sobic008G150300 Sobic003G348800--Sobic008G150300 Sobic001G208600 Sobic001G208600 Sobic009G017500--Sobic001G208600 Sobic001G263900 Sobic001G263900 Sobic009G017500--Sobic001G263900 Sobic009G221900 Sobic009G221900 Sobic009G017500--Sobic009G221900 Sobic002G030800 Sobic002G030800 Sobic009G017500--Sobic002G030800 Sobic008G072600 Sobic008G072600 Sobic009G017500--Sobic008G072600 Sobic010G096100 Sobic010G096100 Sobic009G017500--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic009G017500--Sobic006G075000 Sobic003G099166 Sobic003G099166 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic003G330500 Sobic003G330500 Sobic006G002700--Sobic003G330500 Sobic006G002700--Sobic001G007600 Sobic006G002700--Sobic001G110400 Sobic004G224900 Sobic004G224900 Sobic006G002700--Sobic004G224900 Sobic009G238900 Sobic009G238900 Sobic006G002700--Sobic009G238900 Sobic001G096100 Sobic001G096100 Sobic006G002700--Sobic001G096100 Sobic001G502200 Sobic001G502200 Sobic006G002700--Sobic001G502200 Sobic009G088100 Sobic009G088100 Sobic006G002700--Sobic009G088100 Sobic002G392800 Sobic002G392800 Sobic006G002700--Sobic002G392800 Sobic003G254700--Sobic004G111100 Sobic004G007600 Sobic004G007600 Sobic003G254700--Sobic004G007600 Sobic001G133900 Sobic001G133900 Sobic003G254700--Sobic001G133900 Sobic009G026101 Sobic009G026101 Sobic003G254700--Sobic009G026101 Sobic001G072600 Sobic001G072600 Sobic003G254700--Sobic001G072600 Sobic009G246700 Sobic009G246700 Sobic003G254700--Sobic009G246700 Sobic003G254700--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic003G254700--Sobic002G075500 Sobic002G218900 Sobic002G218900 Sobic003G254700--Sobic002G218900 Sobic001G360700 Sobic001G360700 Sobic007G047300--Sobic001G360700 Sobic004G047600 Sobic004G047600 Sobic007G047300--Sobic004G047600 Sobic009G162300 Sobic009G162300 Sobic007G047300--Sobic009G162300 Sobic003G352700 Sobic003G352700 Sobic007G047300--Sobic003G352700 Sobic001G471800 Sobic001G471800 Sobic007G047300--Sobic001G471800 Sobic007G047300--Sobic004G111100 Sobic002G146000 Sobic002G146000 Sobic007G047300--Sobic002G146000 Sobic002G207200 Sobic002G207200 Sobic007G047300--Sobic002G207200 Sobic002G203900 Sobic002G203900 Sobic007G047300--Sobic002G203900 Sobic009G125900--Sobic009G063400 Sobic009G125900--Sobic009G026101 Sobic009G125900--Sobic002G075500 Sobic002G118700 Sobic002G118700 Sobic009G125900--Sobic002G118700 Sobic010G090500 Sobic010G090500 Sobic009G125900--Sobic010G090500 Sobic004G265600 Sobic004G265600 Sobic009G125900--Sobic004G265600 Sobic009G125900--Sobic010G096100 Sobic004G051300 Sobic004G051300 Sobic009G125900--Sobic004G051300 Sobic009G125900--Sobic003G254700 Sobic010G101900 Sobic010G101900 Sobic004G111100--Sobic010G101900 Sobic004G111100--Sobic007G047300 Sobic004G111100--Sobic003G254700 Sobic004G111100--Sobic009G162300 Sobic003G227700 Sobic003G227700 Sobic004G111100--Sobic003G227700 Sobic004G111100--Sobic001G360700 Sobic004G111100--Sobic002G207200 Sobic004G111100--Sobic001G072600 Sobic009G034300 Sobic009G034300 Sobic004G111100--Sobic009G034300
Octagon: transcription factors


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