Gene annotation
Transcriptome id Sobic.006G038200.1
Synonym Sb06g006110
Functional annotation receptor protein kinase, putative, expressed
UniProt C5YDS3
Pfam PF03629
Panther DB PTHR31988 PTHR31988:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34215 : Domain of unknown function (DUF303)
RAP-DB (Rice) LOC_Os04g20810.3 : receptor protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a012065
Brachypodium KQJ81915
Barley -
Wheat TraesCS2D02G267900 , TraesCS2B02G287700
Populus -


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cDNA sequences
Sobic.006G038200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
2 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase
3 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
4 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
5 Sobic.008G178800 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
6 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
7 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
8 Sobic.001G035600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@induced by either light or pathogen inoculation in the BTx623 seedlings(PubMedID : 20529887)@"The bmr30 mutant harbors a mutation in a phenylpropanoid biosynthetic gene that is key to the interconnection between flavonoids and monolignols, both of which are utilized for lignin synthesis in the grasses."(PubMedID : 34925394)@expressed protein K01859: chalcone isomerase
9 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
11 Sobic.006G104100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
12 Sobic.009G240700 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
13 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
14 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.008G150300 Lg106, putative, expressed -
16 Sobic.003G099166 - -
17 Sobic.002G410700 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
18 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
19 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
20 Sobic.010G258500 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic006G038200 Sobic006G038200 Sobic003G170300 Sobic003G170300 Sobic006G038200--Sobic003G170300 Sobic004G282700 Sobic004G282700 Sobic006G038200--Sobic004G282700 Sobic002G338400 Sobic002G338400 Sobic006G038200--Sobic002G338400 Sobic010G264300 Sobic010G264300 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic003G216500 Sobic003G216500 Sobic006G038200--Sobic003G216500 Sobic001G035600 Sobic001G035600 Sobic006G038200--Sobic001G035600 Sobic006G075000 Sobic006G075000 Sobic006G038200--Sobic006G075000 Sobic009G240700 Sobic009G240700 Sobic003G170300--Sobic009G240700 Sobic008G150300 Sobic008G150300 Sobic003G170300--Sobic008G150300 Sobic001G473400 Sobic001G473400 Sobic003G170300--Sobic001G473400 Sobic004G155100 Sobic004G155100 Sobic003G170300--Sobic004G155100 Sobic003G170300--Sobic004G282700 Sobic002G180300 Sobic002G180300 Sobic003G170300--Sobic002G180300 Sobic002G308300 Sobic002G308300 Sobic003G170300--Sobic002G308300 Sobic001G282500 Sobic001G282500 Sobic003G170300--Sobic001G282500 Sobic003G170300--Sobic010G264300 Sobic004G282700--Sobic003G170300 Sobic004G282700--Sobic010G264300 Sobic004G282700--Sobic002G180300 Sobic001G096100 Sobic001G096100 Sobic004G282700--Sobic001G096100 Sobic002G356400 Sobic002G356400 Sobic004G282700--Sobic002G356400 Sobic001G304400 Sobic001G304400 Sobic004G282700--Sobic001G304400 Sobic004G282700--Sobic006G038200 Sobic005G194900 Sobic005G194900 Sobic004G282700--Sobic005G194900 Sobic008G132400 Sobic008G132400 Sobic004G282700--Sobic008G132400 Sobic002G252000 Sobic002G252000 Sobic002G338400--Sobic002G252000 Sobic009G232200 Sobic009G232200 Sobic002G338400--Sobic009G232200 Sobic002G396400 Sobic002G396400 Sobic002G338400--Sobic002G396400 Sobic002G128800 Sobic002G128800 Sobic002G338400--Sobic002G128800 Sobic002G338400--Sobic006G075000 Sobic006G278100 Sobic006G278100 Sobic002G338400--Sobic006G278100 Sobic001G418100 Sobic001G418100 Sobic002G338400--Sobic001G418100 Sobic002G347300 Sobic002G347300 Sobic002G338400--Sobic002G347300 Sobic002G338400--Sobic006G038200 Sobic001G286200 Sobic001G286200 Sobic010G264300--Sobic001G286200 Sobic002G078300 Sobic002G078300 Sobic010G264300--Sobic002G078300 Sobic010G264300--Sobic002G308300 Sobic001G519000 Sobic001G519000 Sobic010G264300--Sobic001G519000 Sobic010G264300--Sobic002G356400 Sobic009G212200 Sobic009G212200 Sobic010G264300--Sobic009G212200 Sobic001G370700 Sobic001G370700 Sobic010G264300--Sobic001G370700 Sobic010G264300--Sobic001G304400 Sobic010G264300--Sobic002G180300 Sobic008G178800--Sobic006G038200 Sobic009G063400 Sobic009G063400 Sobic008G178800--Sobic009G063400 Sobic010G258500 Sobic010G258500 Sobic008G178800--Sobic010G258500 Sobic008G178800--Sobic002G347300 Sobic009G125900 Sobic009G125900 Sobic008G178800--Sobic009G125900 Sobic008G178800--Sobic004G282700 Sobic008G178800--Sobic009G232200 Sobic008G178800--Sobic009G017500 Sobic010G067500 Sobic010G067500 Sobic008G178800--Sobic010G067500 Sobic001G208600 Sobic001G208600 Sobic009G017500--Sobic001G208600 Sobic001G263900 Sobic001G263900 Sobic009G017500--Sobic001G263900 Sobic009G221900 Sobic009G221900 Sobic009G017500--Sobic009G221900 Sobic002G030800 Sobic002G030800 Sobic009G017500--Sobic002G030800 Sobic008G072600 Sobic008G072600 Sobic009G017500--Sobic008G072600 Sobic010G096100 Sobic010G096100 Sobic009G017500--Sobic010G096100 Sobic009G017500--Sobic006G075000 Sobic003G099166 Sobic003G099166 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic002G410700 Sobic002G410700 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic003G216500--Sobic009G240700 Sobic003G216500--Sobic001G473400 Sobic003G216500--Sobic003G170300 Sobic002G073800 Sobic002G073800 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic006G020900 Sobic006G020900 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic001G012400 Sobic001G012400 Sobic001G035600--Sobic001G012400 Sobic001G035600--Sobic002G338400 Sobic001G035600--Sobic004G282700 Sobic001G035600--Sobic006G038200 Sobic001G012500 Sobic001G012500 Sobic001G035600--Sobic001G012500 Sobic001G035600--Sobic002G347300 Sobic001G035600--Sobic009G240700 Sobic001G035600--Sobic003G170300 Sobic001G035600--Sobic003G216500 Sobic006G075000--Sobic010G096100 Sobic006G075000--Sobic001G208600 Sobic001G484000 Sobic001G484000 Sobic006G075000--Sobic001G484000 Sobic009G226900 Sobic009G226900 Sobic006G075000--Sobic009G226900 Sobic002G072200 Sobic002G072200 Sobic006G075000--Sobic002G072200 Sobic006G075000--Sobic003G099166 Sobic003G352700 Sobic003G352700 Sobic006G075000--Sobic003G352700 Sobic009G026101 Sobic009G026101 Sobic006G075000--Sobic009G026101 Sobic006G075000--Sobic002G338400
Octagon: transcription factors


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