Gene annotation
| Transcriptome id | Sobic.002G347300.1 |
|---|---|
| Synonym | Sb02g036990 |
| Functional annotation | copper methylamine oxidase precursor, putative, expressed |
| UniProt | C5XCA6 |
| Pfam | PF02727 PF02728 PF01179 |
| Panther DB | PTHR10638 PTHR10638:SF37 |
| NCBI CDD | - |
| KEGG Orthology | K00276; AOC3, AOC2, primary-amine oxidase |
| Gene Ontology | GO:0009308; amine metabolic process GO:0008131primary amine oxidase activity GO:0005507copper ion binding |
Orthologs (automatic annotation)
| TAIR | AT1G31690 : Copper amine oxidase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os06g23114.1 : copper methylamine oxidase precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a014956 |
| Brachypodium | KQK15622 |
| Barley | HORVU0Hr1G009050.1 , HORVU4Hr1G074530.4 , HORVU4Hr1G074620.9 , HORVU4Hr1G074620.8 , HORVU4Hr1G074620.1 , HORVU4Hr1G074620.3 , HORVU4Hr1G074620.2 , HORVU4Hr1G074620.5 , HORVU4Hr1G074620.4 , HORVU4Hr1G074620.7 , HORVU4Hr1G074620.6 , HORVU4Hr1G074530.1 , HORVU4Hr1G074530.3 , HORVU4Hr1G074530.5 , HORVU4Hr1G074530.7 , HORVU4Hr1G074530.6 , HORVU4Hr1G074530.8 , HORVU4Hr1G074620.11 , HORVU4Hr1G074620.10 |
| Wheat | TraesCS4D02G281700 , TraesCS4B02G282700 , TraesCS4A02G020900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G012400 | "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed | K13030: cyanohydrin beta-glucosyltransferase |
| 2 | Sobic.001G012600 | MATE efflux family protein, putative, expressed | K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family |
| 3 | Sobic.009G232200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed | - |
| 4 | Sobic.001G334900 | X8 domain containing protein, expressed | - |
| 5 | Sobic.001G208600 | receptor kinase like protein, putative, expressed | - |
| 6 | Sobic.009G221900 | seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 7 | Sobic.003G099166 | - | - |
| 8 | Sobic.002G053900 | Cupin domain containing protein, expressed | - |
| 9 | Sobic.002G338400 | uncharacterized secreted protein, putative, expressed | - |
| 10 | Sobic.001G012500 | similar to Glutathione S transferase 1(PubMedID : 24655390)@"Glutathione S transferase 1, up-regulated under all the stress condition"(PubMedID : 24655390)@similar to Glutathione S transferase 1(PubMedID : 24655390)@Glutathione S transferase 1(PubMedID : 24655390)@glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 11 | Sobic.001G263900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed | K00001: E1.1.1.1, alcohol dehydrogenase |
| 12 | Sobic.009G215000 | - | - |
| 13 | Sobic.009G017500 | beta-hexosaminidase precursor, putative, expressed | K12373: hexosaminidase |
| 14 | Sobic.001G345900 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 15 | Sobic.001G484000 | hydrolase, alpha/beta fold family protein, putative, expressed | - |
| 16 | Sobic.006G075000 | Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed | - |
| 17 | Sobic.001G012200 | similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed | K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase |
| 18 | Sobic.008G178800 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed | K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase |
| 19 | Sobic.005G052500 | "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed | K13946: AUX1, auxin influx carrier (AUX1 LAX family) |
| 20 | Sobic.001G035600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@induced by either light or pathogen inoculation in the BTx623 seedlings(PubMedID : 20529887)@"The bmr30 mutant harbors a mutation in a phenylpropanoid biosynthetic gene that is key to the interconnection between flavonoids and monolignols, both of which are utilized for lignin synthesis in the grasses."(PubMedID : 34925394)@expressed protein | K01859: chalcone isomerase |
Gene co-expression network
Octagon: transcription factors
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