Gene annotation
Transcriptome id Sobic.001G484000.1
Synonym Sb01g045300
Functional annotation hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5WVT7
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF901
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G21950 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g08100.1 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048736 , Zm00025a000907 , Zm00025a015191
Brachypodium KQK23338
Barley HORVU4Hr1G076350.2 , HORVU4Hr1G076350.1 , HORVU0Hr1G009120.2
Wheat TraesCS4D02G292500 , TraesCS4D02G292700 , TraesCS2D02G178700 , TraesCS4B02G293800 , TraesCS4B02G293800 , TraesCS4B02G293900 , TraesCS2B02G197400 , TraesCS4A02G010500
Populus -


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cDNA sequences
Sobic.001G484000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
2 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.002G053900 Cupin domain containing protein, expressed -
5 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
6 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
7 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
8 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
9 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
10 Sobic.003G099166 - -
11 Sobic.006G160900 NAC domain containing protein, putative, expressed -
12 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.010G106700 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
14 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
15 Sobic.002G030800 app1, putative, expressed -
16 Sobic.010G014400 - -
17 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
18 Sobic.004G297950 - -
19 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G484000 Sobic001G484000 Sobic005G052500 Sobic005G052500 Sobic001G484000--Sobic005G052500 Sobic001G046800 Sobic001G046800 Sobic001G484000--Sobic001G046800 Sobic003G352700 Sobic003G352700 Sobic001G484000--Sobic003G352700 Sobic002G053900 Sobic002G053900 Sobic001G484000--Sobic002G053900 Sobic003G269100 Sobic003G269100 Sobic001G484000--Sobic003G269100 Sobic003G082700 Sobic003G082700 Sobic001G484000--Sobic003G082700 Sobic002G094600 Sobic002G094600 Sobic001G484000--Sobic002G094600 Sobic009G008800 Sobic009G008800 Sobic001G484000--Sobic009G008800 Sobic003G239100 Sobic003G239100 Sobic001G484000--Sobic003G239100 Sobic005G052500--Sobic001G484000 Sobic005G052500--Sobic001G046800 Sobic005G052500--Sobic003G269100 Sobic010G106700 Sobic010G106700 Sobic005G052500--Sobic010G106700 Sobic010G047600 Sobic010G047600 Sobic005G052500--Sobic010G047600 Sobic005G052500--Sobic003G352700 Sobic004G297950 Sobic004G297950 Sobic005G052500--Sobic004G297950 Sobic005G052500--Sobic002G053900 Sobic003G321400 Sobic003G321400 Sobic005G052500--Sobic003G321400 Sobic001G046800--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic001G046800--Sobic001G261460 Sobic001G046800--Sobic010G106700 Sobic001G046800--Sobic002G053900 Sobic001G046800--Sobic009G008800 Sobic001G046800--Sobic001G484000 Sobic010G014400 Sobic010G014400 Sobic001G046800--Sobic010G014400 Sobic001G046800--Sobic003G321400 Sobic003G250700 Sobic003G250700 Sobic001G046800--Sobic003G250700 Sobic003G352700--Sobic003G082700 Sobic004G047600 Sobic004G047600 Sobic003G352700--Sobic004G047600 Sobic003G352700--Sobic009G008800 Sobic003G352700--Sobic003G239100 Sobic001G068500 Sobic001G068500 Sobic003G352700--Sobic001G068500 Sobic003G352700--Sobic001G484000 Sobic001G059500 Sobic001G059500 Sobic003G352700--Sobic001G059500 Sobic005G127200 Sobic005G127200 Sobic003G352700--Sobic005G127200 Sobic007G047300 Sobic007G047300 Sobic003G352700--Sobic007G047300 Sobic002G053900--Sobic001G046800 Sobic009G072800 Sobic009G072800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic002G053900--Sobic010G106700 Sobic002G053900--Sobic010G047600 Sobic002G053900--Sobic001G484000 Sobic001G190500 Sobic001G190500 Sobic002G053900--Sobic001G190500 Sobic009G215000 Sobic009G215000 Sobic002G053900--Sobic009G215000 Sobic002G053900--Sobic003G239100 Sobic003G269100--Sobic003G321400 Sobic001G099600 Sobic001G099600 Sobic003G269100--Sobic001G099600 Sobic003G269100--Sobic004G297950 Sobic003G115200 Sobic003G115200 Sobic003G269100--Sobic003G115200 Sobic003G269100--Sobic010G047600 Sobic003G269100--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G269100--Sobic001G264400 Sobic003G269100--Sobic001G484000 Sobic003G269100--Sobic001G046800 Sobic003G082700--Sobic003G352700 Sobic003G082700--Sobic003G239100 Sobic003G082700--Sobic009G008800 Sobic003G082700--Sobic004G047600 Sobic003G082700--Sobic001G484000 Sobic006G160900 Sobic006G160900 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic001G471800 Sobic001G471800 Sobic003G082700--Sobic001G471800 Sobic003G082700--Sobic001G068500 Sobic004G165300 Sobic004G165300 Sobic002G094600--Sobic004G165300 Sobic002G094600--Sobic001G471800 Sobic003G236600 Sobic003G236600 Sobic002G094600--Sobic003G236600 Sobic003G183300 Sobic003G183300 Sobic002G094600--Sobic003G183300 Sobic002G094600--Sobic009G008800 Sobic002G094600--Sobic001G484000 Sobic004G193500 Sobic004G193500 Sobic002G094600--Sobic004G193500 Sobic002G146000 Sobic002G146000 Sobic002G094600--Sobic002G146000 Sobic006G282300 Sobic006G282300 Sobic002G094600--Sobic006G282300 Sobic009G008800--Sobic001G059500 Sobic009G008800--Sobic010G106700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic009G008800--Sobic003G082700 Sobic009G008800--Sobic001G046800 Sobic009G008800--Sobic003G239100 Sobic001G144800 Sobic001G144800 Sobic009G008800--Sobic001G144800 Sobic003G206700 Sobic003G206700 Sobic009G008800--Sobic003G206700 Sobic003G239100--Sobic003G082700 Sobic003G239100--Sobic009G008800 Sobic003G239100--Sobic003G352700 Sobic005G145100 Sobic005G145100 Sobic003G239100--Sobic005G145100 Sobic004G266700 Sobic004G266700 Sobic003G239100--Sobic004G266700 Sobic003G239100--Sobic005G127200 Sobic003G239100--Sobic002G053900 Sobic002G030800 Sobic002G030800 Sobic003G239100--Sobic002G030800 Sobic003G239100--Sobic001G484000
Octagon: transcription factors


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