Gene annotation
Transcriptome id Sobic.002G094600.1
Synonym ATCESA2, cellulose synthase;cellulose synthase, ATH-A, CESA2, Sb02g007810
Functional annotation "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3" (PubMedID : 26198258)
"cellulose synthase A2, incorporate UDP-sugars into cellulose" (PubMedID : 28944535)
CESA6 - cellulose synthase, expressed
UniProt C5X2N9
Pfam PF13632 PF14569
Panther DB PTHR13301 PTHR13301:SF73
NCBI CDD -
KEGG Orthology K10999; cellulose synthase A
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64740 : cellulose synthase 6
RAP-DB (Rice) LOC_Os07g14850.1 : CESA6 - cellulose synthase, expressed
MaizeGDB (Corn) Zm00025a051500 , Zm00025a008946 , Zm00025a013593 , Zm00025a013618 , Zm00025a045761 , Zm00025a057238 , Zm00025a032075 , Zm00025a045530 , Zm00025a009576 , Zm00025a008673 , Zm00025a047054
Brachypodium PNT73945 , PNT73946 , KQK12260 , KQK12261 , KQK12572 , KQK12573 , KQK12571 , PNT75244 , PNT75246 , KQK20229 , KQK16504 , KQK16503 , KQK16502 , KQK16501 , KQK07271 , PNT75245
Barley HORVU0Hr1G038120.2 , HORVU0Hr1G038120.3 , HORVU0Hr1G038120.1 , HORVU0Hr1G038120.6 , HORVU0Hr1G038120.7 , HORVU0Hr1G038120.4 , HORVU0Hr1G038120.5 , HORVU0Hr1G038120.8 , HORVU0Hr1G038120.9 , HORVU5Hr1G064230.8 , HORVU5Hr1G064230.3 , HORVU5Hr1G064230.6 , HORVU5Hr1G064230.7 , HORVU5Hr1G064230.4 , HORVU5Hr1G118270.21 , HORVU5Hr1G118270.20 , HORVU5Hr1G118270.23 , HORVU5Hr1G118270.22 , HORVU5Hr1G118270.25 , HORVU5Hr1G118270.24 , HORVU5Hr1G118270.27 , HORVU5Hr1G118270.26 , HORVU5Hr1G118270.29 , HORVU5Hr1G118270.28 , HORVU5Hr1G064230.18 , HORVU5Hr1G064230.19 , HORVU5Hr1G064230.11 , HORVU5Hr1G064230.12 , HORVU5Hr1G064230.13 , HORVU5Hr1G064230.17 , HORVU5Hr1G118270.30 , HORVU5Hr1G064230.21 , HORVU5Hr1G064230.20 , HORVU5Hr1G064230.22 , HORVU1Hr1G026330.1 , HORVU1Hr1G026330.3 , HORVU1Hr1G026330.2 , HORVU1Hr1G026330.4 , HORVU5Hr1G118270.6 , HORVU5Hr1G118270.7 , HORVU5Hr1G118270.4 , HORVU5Hr1G118270.5 , HORVU5Hr1G118270.2 , HORVU5Hr1G118270.3 , HORVU5Hr1G118270.1 , HORVU5Hr1G118270.8 , HORVU5Hr1G118270.9 , HORVU5Hr1G110000.1 , HORVU5Hr1G110000.3 , HORVU5Hr1G110000.2 , HORVU5Hr1G110000.5 , HORVU5Hr1G110000.4 , HORVU5Hr1G110000.7 , HORVU5Hr1G110000.6 , HORVU5Hr1G110000.9 , HORVU5Hr1G110000.8 , HORVU5Hr1G118270.19 , HORVU5Hr1G118270.14 , HORVU5Hr1G118270.15 , HORVU5Hr1G118270.16 , HORVU5Hr1G118270.17 , HORVU5Hr1G118270.10 , HORVU5Hr1G118270.11 , HORVU5Hr1G118270.12 , HORVU5Hr1G118270.13 , HORVU0Hr1G038120.10
Wheat TraesCS5D02G470400 , TraesCS5D02G470400 , TraesCS5D02G517200 , TraesCS5D02G517200 , TraesCS5D02G517200 , TraesCS6B02G104600 , TraesCS5B02G221600 , TraesCS5B02G221600 , TraesCS5B02G221600 , TraesCS5B02G469200 , TraesCS5B02G469200 , TraesCS5B02G469200 , TraesCSU02G142500 , TraesCS6A02G077800 , TraesCS6A02G077800 , TraesCS5A02G222500 , TraesCS4A02G355000 , TraesCS5B02G517500 , TraesCS5B02G517500 , TraesCS5B02G517500 , TraesCS4A02G355000 , TraesCS4A02G355000 , TraesCS4A02G355000 , TraesCS5A02G459400 , TraesCS5A02G459400 , TraesCS1A02G116200 , TraesCS1A02G116200 , TraesCS5D02G230300
Populus PNT34627 , PNT34626 , PNT06230 , PNT06234 , PNT06233 , PNT06232 , PNT06231


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G165300 Cupin domain containing protein, expressed -
2 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
3 Sobic.003G236600 expressed protein -
4 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
6 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
7 Sobic.004G193500 expressed protein -
8 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
9 Sobic.006G282300 - -
10 Sobic.001G261460 - -
11 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
12 Sobic.010G106700 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
13 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
14 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.009G162300 similar to Putative laccase-11(PubMedID : 29862293)@Laccase LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.003G426200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
19 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
20 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G094600 Sobic002G094600 Sobic004G165300 Sobic004G165300 Sobic002G094600--Sobic004G165300 Sobic001G471800 Sobic001G471800 Sobic002G094600--Sobic001G471800 Sobic003G236600 Sobic003G236600 Sobic002G094600--Sobic003G236600 Sobic003G183300 Sobic003G183300 Sobic002G094600--Sobic003G183300 Sobic009G008800 Sobic009G008800 Sobic002G094600--Sobic009G008800 Sobic001G484000 Sobic001G484000 Sobic002G094600--Sobic001G484000 Sobic004G193500 Sobic004G193500 Sobic002G094600--Sobic004G193500 Sobic002G146000 Sobic002G146000 Sobic002G094600--Sobic002G146000 Sobic006G282300 Sobic006G282300 Sobic002G094600--Sobic006G282300 Sobic004G165300--Sobic002G094600 Sobic004G165300--Sobic001G471800 Sobic001G059500 Sobic001G059500 Sobic004G165300--Sobic001G059500 Sobic002G311501 Sobic002G311501 Sobic004G165300--Sobic002G311501 Sobic003G368100 Sobic003G368100 Sobic004G165300--Sobic003G368100 Sobic001G068500 Sobic001G068500 Sobic004G165300--Sobic001G068500 Sobic002G365801 Sobic002G365801 Sobic004G165300--Sobic002G365801 Sobic004G165300--Sobic009G008800 Sobic004G165300--Sobic004G193500 Sobic001G471800--Sobic002G146000 Sobic004G047600 Sobic004G047600 Sobic001G471800--Sobic004G047600 Sobic006G224500 Sobic006G224500 Sobic001G471800--Sobic006G224500 Sobic001G471800--Sobic004G193500 Sobic001G471800--Sobic003G183300 Sobic003G255600 Sobic003G255600 Sobic001G471800--Sobic003G255600 Sobic001G360700 Sobic001G360700 Sobic001G471800--Sobic001G360700 Sobic006G031100 Sobic006G031100 Sobic001G471800--Sobic006G031100 Sobic010G093300 Sobic010G093300 Sobic001G471800--Sobic010G093300 Sobic008G102800 Sobic008G102800 Sobic003G236600--Sobic008G102800 Sobic006G028500 Sobic006G028500 Sobic003G236600--Sobic006G028500 Sobic003G140700 Sobic003G140700 Sobic003G236600--Sobic003G140700 Sobic009G199001 Sobic009G199001 Sobic003G236600--Sobic009G199001 Sobic004G322100 Sobic004G322100 Sobic003G236600--Sobic004G322100 Sobic001G238000 Sobic001G238000 Sobic003G236600--Sobic001G238000 Sobic003G236600--Sobic002G094600 Sobic004G110700 Sobic004G110700 Sobic003G236600--Sobic004G110700 Sobic004G306900 Sobic004G306900 Sobic003G236600--Sobic004G306900 Sobic004G271800 Sobic004G271800 Sobic003G183300--Sobic004G271800 Sobic003G183300--Sobic002G146000 Sobic003G000100 Sobic003G000100 Sobic003G183300--Sobic003G000100 Sobic010G028100 Sobic010G028100 Sobic003G183300--Sobic010G028100 Sobic006G003100 Sobic006G003100 Sobic003G183300--Sobic006G003100 Sobic006G092700 Sobic006G092700 Sobic003G183300--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic003G183300--Sobic006G135300 Sobic008G135300 Sobic008G135300 Sobic003G183300--Sobic008G135300 Sobic010G070400 Sobic010G070400 Sobic003G183300--Sobic010G070400 Sobic009G008800--Sobic001G059500 Sobic010G106700 Sobic010G106700 Sobic009G008800--Sobic010G106700 Sobic003G352700 Sobic003G352700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic003G082700 Sobic003G082700 Sobic009G008800--Sobic003G082700 Sobic001G046800 Sobic001G046800 Sobic009G008800--Sobic001G046800 Sobic003G239100 Sobic003G239100 Sobic009G008800--Sobic003G239100 Sobic001G144800 Sobic001G144800 Sobic009G008800--Sobic001G144800 Sobic003G206700 Sobic003G206700 Sobic009G008800--Sobic003G206700 Sobic005G052500 Sobic005G052500 Sobic001G484000--Sobic005G052500 Sobic001G484000--Sobic001G046800 Sobic001G484000--Sobic003G352700 Sobic002G053900 Sobic002G053900 Sobic001G484000--Sobic002G053900 Sobic003G269100 Sobic003G269100 Sobic001G484000--Sobic003G269100 Sobic001G484000--Sobic003G082700 Sobic001G484000--Sobic002G094600 Sobic001G484000--Sobic009G008800 Sobic001G484000--Sobic003G239100 Sobic004G193500--Sobic002G146000 Sobic001G274400 Sobic001G274400 Sobic004G193500--Sobic001G274400 Sobic007G073000 Sobic007G073000 Sobic004G193500--Sobic007G073000 Sobic005G177400 Sobic005G177400 Sobic004G193500--Sobic005G177400 Sobic008G164450 Sobic008G164450 Sobic004G193500--Sobic008G164450 Sobic004G193500--Sobic003G255600 Sobic004G193500--Sobic006G135300 Sobic004G193500--Sobic006G092700 Sobic004G193500--Sobic006G224500 Sobic002G146000--Sobic007G073000 Sobic002G146000--Sobic006G092700 Sobic007G037600 Sobic007G037600 Sobic002G146000--Sobic007G037600 Sobic003G353200 Sobic003G353200 Sobic002G146000--Sobic003G353200 Sobic002G146000--Sobic003G000100 Sobic006G085700 Sobic006G085700 Sobic002G146000--Sobic006G085700 Sobic010G031700 Sobic010G031700 Sobic002G146000--Sobic010G031700 Sobic003G215300 Sobic003G215300 Sobic002G146000--Sobic003G215300 Sobic004G106100 Sobic004G106100 Sobic002G146000--Sobic004G106100 Sobic002G365550 Sobic002G365550 Sobic006G282300--Sobic002G365550 Sobic004G071000 Sobic004G071000 Sobic006G282300--Sobic004G071000 Sobic006G282300--Sobic002G365801 Sobic006G028400 Sobic006G028400 Sobic006G282300--Sobic006G028400 Sobic008G055100 Sobic008G055100 Sobic006G282300--Sobic008G055100 Sobic010G096400 Sobic010G096400 Sobic006G282300--Sobic010G096400 Sobic010G212500 Sobic010G212500 Sobic006G282300--Sobic010G212500 Sobic003G119500 Sobic003G119500 Sobic006G282300--Sobic003G119500 Sobic007G178900 Sobic007G178900 Sobic006G282300--Sobic007G178900
Octagon: transcription factors


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