Gene annotation
Transcriptome id Sobic.004G165300.1
Synonym Sb04g021670
Functional annotation Cupin domain containing protein, expressed
UniProt C5XTE7
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10080 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os02g32980.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020541
Brachypodium KQJ99725
Barley HORVU6Hr1G005420.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
2 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
3 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.002G311501 - -
5 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
6 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
7 Sobic.002G365801 - -
8 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
9 Sobic.004G193500 expressed protein -
10 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
13 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
14 Sobic.010G138300 DUF617 domain containing protein, expressed -
15 Sobic.003G236600 expressed protein -
16 Sobic.001G250100 thaumatin, putative, expressed -
17 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.001G261460 - -
19 Sobic.007G154200 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
20 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase


Gene co-expression network
sample Sobic004G165300 Sobic004G165300 Sobic002G094600 Sobic002G094600 Sobic004G165300--Sobic002G094600 Sobic001G471800 Sobic001G471800 Sobic004G165300--Sobic001G471800 Sobic001G059500 Sobic001G059500 Sobic004G165300--Sobic001G059500 Sobic002G311501 Sobic002G311501 Sobic004G165300--Sobic002G311501 Sobic003G368100 Sobic003G368100 Sobic004G165300--Sobic003G368100 Sobic001G068500 Sobic001G068500 Sobic004G165300--Sobic001G068500 Sobic002G365801 Sobic002G365801 Sobic004G165300--Sobic002G365801 Sobic009G008800 Sobic009G008800 Sobic004G165300--Sobic009G008800 Sobic004G193500 Sobic004G193500 Sobic004G165300--Sobic004G193500 Sobic002G094600--Sobic004G165300 Sobic002G094600--Sobic001G471800 Sobic003G236600 Sobic003G236600 Sobic002G094600--Sobic003G236600 Sobic003G183300 Sobic003G183300 Sobic002G094600--Sobic003G183300 Sobic002G094600--Sobic009G008800 Sobic001G484000 Sobic001G484000 Sobic002G094600--Sobic001G484000 Sobic002G094600--Sobic004G193500 Sobic002G146000 Sobic002G146000 Sobic002G094600--Sobic002G146000 Sobic006G282300 Sobic006G282300 Sobic002G094600--Sobic006G282300 Sobic001G471800--Sobic002G146000 Sobic004G047600 Sobic004G047600 Sobic001G471800--Sobic004G047600 Sobic006G224500 Sobic006G224500 Sobic001G471800--Sobic006G224500 Sobic001G471800--Sobic004G193500 Sobic001G471800--Sobic003G183300 Sobic003G255600 Sobic003G255600 Sobic001G471800--Sobic003G255600 Sobic001G360700 Sobic001G360700 Sobic001G471800--Sobic001G360700 Sobic006G031100 Sobic006G031100 Sobic001G471800--Sobic006G031100 Sobic010G093300 Sobic010G093300 Sobic001G471800--Sobic010G093300 Sobic001G059500--Sobic003G368100 Sobic003G206700 Sobic003G206700 Sobic001G059500--Sobic003G206700 Sobic001G059500--Sobic009G008800 Sobic001G059500--Sobic001G068500 Sobic001G144800 Sobic001G144800 Sobic001G059500--Sobic001G144800 Sobic002G050300 Sobic002G050300 Sobic001G059500--Sobic002G050300 Sobic001G059600 Sobic001G059600 Sobic001G059500--Sobic001G059600 Sobic003G341500 Sobic003G341500 Sobic001G059500--Sobic003G341500 Sobic003G352700 Sobic003G352700 Sobic001G059500--Sobic003G352700 Sobic002G365550 Sobic002G365550 Sobic002G311501--Sobic002G365550 Sobic002G311501--Sobic002G365801 Sobic002G311501--Sobic003G368100 Sobic002G311501--Sobic001G059500 Sobic002G311501--Sobic001G068500 Sobic002G311501--Sobic004G165300 Sobic010G096400 Sobic010G096400 Sobic002G311501--Sobic010G096400 Sobic005G160700 Sobic005G160700 Sobic002G311501--Sobic005G160700 Sobic002G311501--Sobic001G059600 Sobic003G368100--Sobic001G068500 Sobic003G368100--Sobic002G050300 Sobic003G368100--Sobic001G059600 Sobic003G368100--Sobic001G059500 Sobic003G368100--Sobic003G341500 Sobic003G368100--Sobic002G365801 Sobic003G368100--Sobic001G144800 Sobic003G368100--Sobic010G093300 Sobic005G127200 Sobic005G127200 Sobic003G368100--Sobic005G127200 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic004G266700 Sobic004G266700 Sobic001G068500--Sobic004G266700 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G068500--Sobic001G144800 Sobic002G365801--Sobic002G365550 Sobic004G071000 Sobic004G071000 Sobic002G365801--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365801--Sobic010G115700 Sobic010G212500 Sobic010G212500 Sobic002G365801--Sobic010G212500 Sobic002G368300 Sobic002G368300 Sobic002G365801--Sobic002G368300 Sobic002G365500 Sobic002G365500 Sobic002G365801--Sobic002G365500 Sobic002G365801--Sobic010G096400 Sobic001G379400 Sobic001G379400 Sobic002G365801--Sobic001G379400 Sobic009G088900 Sobic009G088900 Sobic002G365801--Sobic009G088900 Sobic009G008800--Sobic001G059500 Sobic010G106700 Sobic010G106700 Sobic009G008800--Sobic010G106700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic003G082700 Sobic003G082700 Sobic009G008800--Sobic003G082700 Sobic001G046800 Sobic001G046800 Sobic009G008800--Sobic001G046800 Sobic003G239100 Sobic003G239100 Sobic009G008800--Sobic003G239100 Sobic009G008800--Sobic001G144800 Sobic009G008800--Sobic003G206700 Sobic004G193500--Sobic002G146000 Sobic001G274400 Sobic001G274400 Sobic004G193500--Sobic001G274400 Sobic007G073000 Sobic007G073000 Sobic004G193500--Sobic007G073000 Sobic005G177400 Sobic005G177400 Sobic004G193500--Sobic005G177400 Sobic008G164450 Sobic008G164450 Sobic004G193500--Sobic008G164450 Sobic004G193500--Sobic003G255600 Sobic006G135300 Sobic006G135300 Sobic004G193500--Sobic006G135300 Sobic006G092700 Sobic006G092700 Sobic004G193500--Sobic006G092700 Sobic004G193500--Sobic006G224500
Octagon: transcription factors


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