Gene annotation
Transcriptome id Sobic.009G221900.1
Synonym Sb09g027590
Functional annotation seed storage 2S albumin superfamily( (PubMedID : 26759170,(PubMedID : 24597475)
LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5YV13
Pfam PF14368
Panther DB PTHR33214
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18280 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os05g47700.1 : LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a044463
Brachypodium KQK05036
Barley HORVU1Hr1G083180.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G221900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
2 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
3 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
4 Sobic.003G099166 - -
5 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.008G091557 - -
7 Sobic.001G208600 receptor kinase like protein, putative, expressed -
8 Sobic.002G030800 app1, putative, expressed -
9 Sobic.002G207000 - -
10 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
11 Sobic.005G096101 - -
12 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.001G250100 thaumatin, putative, expressed -
14 Sobic.002G083600 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
15 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
16 Sobic.006G256200 Myb-like DNA-binding domain containing protein, putative, expressed -
17 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
18 Sobic.008G072600 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
19 Sobic.008G055800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -


Gene co-expression network
sample Sobic009G221900 Sobic009G221900 Sobic001G263900 Sobic001G263900 Sobic009G221900--Sobic001G263900 Sobic002G347300 Sobic002G347300 Sobic009G221900--Sobic002G347300 Sobic009G017500 Sobic009G017500 Sobic009G221900--Sobic009G017500 Sobic003G099166 Sobic003G099166 Sobic009G221900--Sobic003G099166 Sobic003G371400 Sobic003G371400 Sobic009G221900--Sobic003G371400 Sobic008G091557 Sobic008G091557 Sobic009G221900--Sobic008G091557 Sobic001G208600 Sobic001G208600 Sobic009G221900--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic009G221900--Sobic002G030800 Sobic002G207000 Sobic002G207000 Sobic009G221900--Sobic002G207000 Sobic001G263900--Sobic009G221900 Sobic001G263900--Sobic003G099166 Sobic001G250100 Sobic001G250100 Sobic001G263900--Sobic001G250100 Sobic001G263900--Sobic009G017500 Sobic002G383900 Sobic002G383900 Sobic001G263900--Sobic002G383900 Sobic001G263900--Sobic002G030800 Sobic001G471800 Sobic001G471800 Sobic001G263900--Sobic001G471800 Sobic002G085800 Sobic002G085800 Sobic001G263900--Sobic002G085800 Sobic007G047300 Sobic007G047300 Sobic001G263900--Sobic007G047300 Sobic001G012400 Sobic001G012400 Sobic002G347300--Sobic001G012400 Sobic001G012600 Sobic001G012600 Sobic002G347300--Sobic001G012600 Sobic009G232200 Sobic009G232200 Sobic002G347300--Sobic009G232200 Sobic001G334900 Sobic001G334900 Sobic002G347300--Sobic001G334900 Sobic002G347300--Sobic001G208600 Sobic002G347300--Sobic009G221900 Sobic002G347300--Sobic003G099166 Sobic002G053900 Sobic002G053900 Sobic002G347300--Sobic002G053900 Sobic002G338400 Sobic002G338400 Sobic002G347300--Sobic002G338400 Sobic009G017500--Sobic001G208600 Sobic009G017500--Sobic001G263900 Sobic009G017500--Sobic009G221900 Sobic009G017500--Sobic002G030800 Sobic008G072600 Sobic008G072600 Sobic009G017500--Sobic008G072600 Sobic010G096100 Sobic010G096100 Sobic009G017500--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic009G017500--Sobic006G075000 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic003G099166--Sobic001G208600 Sobic001G484000 Sobic001G484000 Sobic003G099166--Sobic001G484000 Sobic003G099166--Sobic001G263900 Sobic003G099166--Sobic006G075000 Sobic005G052500 Sobic005G052500 Sobic003G099166--Sobic005G052500 Sobic003G082700 Sobic003G082700 Sobic003G099166--Sobic003G082700 Sobic003G352700 Sobic003G352700 Sobic003G099166--Sobic003G352700 Sobic003G099166--Sobic002G347300 Sobic003G099166--Sobic009G221900 Sobic005G112000 Sobic005G112000 Sobic003G371400--Sobic005G112000 Sobic001G343400 Sobic001G343400 Sobic003G371400--Sobic001G343400 Sobic008G055800 Sobic008G055800 Sobic003G371400--Sobic008G055800 Sobic003G371400--Sobic009G221900 Sobic003G371400--Sobic003G082700 Sobic003G371400--Sobic001G208600 Sobic003G378800 Sobic003G378800 Sobic003G371400--Sobic003G378800 Sobic003G371400--Sobic003G099166 Sobic002G083600 Sobic002G083600 Sobic003G371400--Sobic002G083600 Sobic004G034200 Sobic004G034200 Sobic008G091557--Sobic004G034200 Sobic007G038600 Sobic007G038600 Sobic008G091557--Sobic007G038600 Sobic008G133000 Sobic008G133000 Sobic008G091557--Sobic008G133000 Sobic008G091557--Sobic009G221900 Sobic001G131001 Sobic001G131001 Sobic008G091557--Sobic001G131001 Sobic005G107500 Sobic005G107500 Sobic008G091557--Sobic005G107500 Sobic008G091557--Sobic008G072600 Sobic009G125300 Sobic009G125300 Sobic008G091557--Sobic009G125300 Sobic008G091557--Sobic001G263900 Sobic005G145100 Sobic005G145100 Sobic001G208600--Sobic005G145100 Sobic001G208600--Sobic003G099166 Sobic001G208600--Sobic006G075000 Sobic003G239100 Sobic003G239100 Sobic001G208600--Sobic003G239100 Sobic001G208600--Sobic009G017500 Sobic001G208600--Sobic002G053900 Sobic001G208600--Sobic001G334900 Sobic001G208600--Sobic002G030800 Sobic001G208600--Sobic003G352700 Sobic005G127200 Sobic005G127200 Sobic002G030800--Sobic005G127200 Sobic010G093300 Sobic010G093300 Sobic002G030800--Sobic010G093300 Sobic001G068500 Sobic001G068500 Sobic002G030800--Sobic001G068500 Sobic002G030800--Sobic001G471800 Sobic001G413700 Sobic001G413700 Sobic002G030800--Sobic001G413700 Sobic002G030800--Sobic001G250100 Sobic002G030800--Sobic003G239100 Sobic001G059600 Sobic001G059600 Sobic002G030800--Sobic001G059600 Sobic006G224500 Sobic006G224500 Sobic002G030800--Sobic006G224500 Sobic003G079100 Sobic003G079100 Sobic002G207000--Sobic003G079100 Sobic003G255600 Sobic003G255600 Sobic002G207000--Sobic003G255600 Sobic002G207000--Sobic001G471800 Sobic002G207000--Sobic006G224500 Sobic002G082000 Sobic002G082000 Sobic002G207000--Sobic002G082000 Sobic007G015100 Sobic007G015100 Sobic002G207000--Sobic007G015100 Sobic001G514700 Sobic001G514700 Sobic002G207000--Sobic001G514700 Sobic006G108300 Sobic006G108300 Sobic002G207000--Sobic006G108300 Sobic005G182800 Sobic005G182800 Sobic002G207000--Sobic005G182800
Octagon: transcription factors


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