Gene annotation
Transcriptome id Sobic.006G256200.8,Sobic.006G256200.7,Sobic.006G256200.10,Sobic.006G256200.5,Sobic.006G256200.6,Sobic.006G256200.9,Sobic.006G256200.1,Sobic.006G256200.2
Synonym Sb06g031970
Functional annotation Myb-like DNA-binding domain containing protein, putative, expressed
UniProt A0A1B6PNW5 , A0A1Z5RFK4 , C5Y9Z6 , A0A1B6PNY1
Pfam PF00249 PF14379
Panther DB PTHR31314 PTHR31314:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06800 : myb-like HTH transcriptional regulator family protein
RAP-DB (Rice) LOC_Os04g56990.1 : Myb-like DNA-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a057309 , Zm00025a009403
Brachypodium KQJ85166 , KQJ85167
Barley -
Wheat TraesCS2A02G488200 , TraesCS2D02G488500 , TraesCS2D02G488500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G072600 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
2 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.008G091557 - -
4 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
5 Sobic.006G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
6 Sobic.002G083600 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
7 Sobic.001G208600 receptor kinase like protein, putative, expressed -
8 Sobic.005G071800 - -
9 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
10 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
12 Sobic.010G171300 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
13 Sobic.005G093500 expressed protein -
14 Sobic.002G030800 app1, putative, expressed -
15 Sobic.001G358700 heavy metal-associated domain containing protein, expressed -
16 Sobic.003G258800 glutamate synthase, chloroplast precursor, putative, expressed K00264: glutamate synthase (NADH)
17 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
18 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
19 Sobic.008G133000 expressed protein -
20 Sobic.004G075800 chloride channel protein, putative, expressed K05016: chloride channel 7


Gene co-expression network
sample Sobic006G256200 Sobic006G256200 Sobic008G072600 Sobic008G072600 Sobic006G256200--Sobic008G072600 Sobic009G221900 Sobic009G221900 Sobic006G256200--Sobic009G221900 Sobic008G091557 Sobic008G091557 Sobic006G256200--Sobic008G091557 Sobic009G017500 Sobic009G017500 Sobic006G256200--Sobic009G017500 Sobic006G249400 Sobic006G249400 Sobic006G256200--Sobic006G249400 Sobic002G083600 Sobic002G083600 Sobic006G256200--Sobic002G083600 Sobic001G208600 Sobic001G208600 Sobic006G256200--Sobic001G208600 Sobic005G071800 Sobic005G071800 Sobic006G256200--Sobic005G071800 Sobic005G115600 Sobic005G115600 Sobic006G256200--Sobic005G115600 Sobic008G072600--Sobic006G256200 Sobic008G072600--Sobic009G017500 Sobic008G072600--Sobic008G091557 Sobic008G072600--Sobic009G221900 Sobic009G063400 Sobic009G063400 Sobic008G072600--Sobic009G063400 Sobic005G107500 Sobic005G107500 Sobic008G072600--Sobic005G107500 Sobic007G038600 Sobic007G038600 Sobic008G072600--Sobic007G038600 Sobic001G263900 Sobic001G263900 Sobic008G072600--Sobic001G263900 Sobic010G096100 Sobic010G096100 Sobic008G072600--Sobic010G096100 Sobic009G221900--Sobic001G263900 Sobic002G347300 Sobic002G347300 Sobic009G221900--Sobic002G347300 Sobic009G221900--Sobic009G017500 Sobic003G099166 Sobic003G099166 Sobic009G221900--Sobic003G099166 Sobic003G371400 Sobic003G371400 Sobic009G221900--Sobic003G371400 Sobic009G221900--Sobic008G091557 Sobic009G221900--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic009G221900--Sobic002G030800 Sobic002G207000 Sobic002G207000 Sobic009G221900--Sobic002G207000 Sobic004G034200 Sobic004G034200 Sobic008G091557--Sobic004G034200 Sobic008G091557--Sobic007G038600 Sobic008G133000 Sobic008G133000 Sobic008G091557--Sobic008G133000 Sobic008G091557--Sobic009G221900 Sobic001G131001 Sobic001G131001 Sobic008G091557--Sobic001G131001 Sobic008G091557--Sobic005G107500 Sobic008G091557--Sobic008G072600 Sobic009G125300 Sobic009G125300 Sobic008G091557--Sobic009G125300 Sobic008G091557--Sobic001G263900 Sobic009G017500--Sobic001G208600 Sobic009G017500--Sobic001G263900 Sobic009G017500--Sobic009G221900 Sobic009G017500--Sobic002G030800 Sobic009G017500--Sobic008G072600 Sobic009G017500--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic009G017500--Sobic006G075000 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic004G044200 Sobic004G044200 Sobic006G249400--Sobic004G044200 Sobic003G234101 Sobic003G234101 Sobic006G249400--Sobic003G234101 Sobic007G075700 Sobic007G075700 Sobic006G249400--Sobic007G075700 Sobic005G218600 Sobic005G218600 Sobic006G249400--Sobic005G218600 Sobic004G309300 Sobic004G309300 Sobic006G249400--Sobic004G309300 Sobic006G249400--Sobic006G256200 Sobic005G218700 Sobic005G218700 Sobic006G249400--Sobic005G218700 Sobic006G033800 Sobic006G033800 Sobic006G249400--Sobic006G033800 Sobic001G012600 Sobic001G012600 Sobic006G249400--Sobic001G012600 Sobic002G083600--Sobic003G371400 Sobic005G112000 Sobic005G112000 Sobic002G083600--Sobic005G112000 Sobic002G083600--Sobic009G221900 Sobic001G402400 Sobic001G402400 Sobic002G083600--Sobic001G402400 Sobic007G064900 Sobic007G064900 Sobic002G083600--Sobic007G064900 Sobic002G083600--Sobic002G207000 Sobic010G234300 Sobic010G234300 Sobic002G083600--Sobic010G234300 Sobic005G012800 Sobic005G012800 Sobic002G083600--Sobic005G012800 Sobic001G365200 Sobic001G365200 Sobic002G083600--Sobic001G365200 Sobic005G145100 Sobic005G145100 Sobic001G208600--Sobic005G145100 Sobic001G208600--Sobic003G099166 Sobic001G208600--Sobic006G075000 Sobic003G239100 Sobic003G239100 Sobic001G208600--Sobic003G239100 Sobic001G208600--Sobic009G017500 Sobic002G053900 Sobic002G053900 Sobic001G208600--Sobic002G053900 Sobic001G334900 Sobic001G334900 Sobic001G208600--Sobic001G334900 Sobic001G208600--Sobic002G030800 Sobic003G352700 Sobic003G352700 Sobic001G208600--Sobic003G352700 Sobic005G071800--Sobic005G012800 Sobic005G093500 Sobic005G093500 Sobic005G071800--Sobic005G093500 Sobic005G071800--Sobic009G063400 Sobic001G196000 Sobic001G196000 Sobic005G071800--Sobic001G196000 Sobic005G071800--Sobic006G256200 Sobic005G071800--Sobic010G096100 Sobic002G064600 Sobic002G064600 Sobic005G071800--Sobic002G064600 Sobic003G258800 Sobic003G258800 Sobic005G071800--Sobic003G258800 Sobic005G071800--Sobic002G083600 Sobic006G030800 Sobic006G030800 Sobic005G115600--Sobic006G030800 Sobic005G115600--Sobic009G017500 Sobic003G279800 Sobic003G279800 Sobic005G115600--Sobic003G279800 Sobic002G383900 Sobic002G383900 Sobic005G115600--Sobic002G383900 Sobic003G157700 Sobic003G157700 Sobic005G115600--Sobic003G157700 Sobic005G115600--Sobic002G083600 Sobic005G115600--Sobic006G256200 Sobic005G115600--Sobic003G258800 Sobic003G105000 Sobic003G105000 Sobic005G115600--Sobic003G105000
Octagon: transcription factors


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