Gene annotation
Transcriptome id Sobic.004G075800.1
Synonym Sb04g006250
Functional annotation chloride channel protein, putative, expressed
UniProt C5XXD5
Pfam PF00571 PF00654
Panther DB PTHR11689 PTHR11689:SF97
NCBI CDD -
KEGG Orthology K05016; chloride channel 7
Gene Ontology GO:0016020; membrane GO:0006821chloride transport GO:0005247voltage-gated chloride channel activity


Orthologs (automatic annotation)
TAIR AT5G33280 : Voltage-gated chloride channel family protein
RAP-DB (Rice) LOC_Os08g20570.1 : chloride channel protein, putative, expressed
MaizeGDB (Corn) Zm00025a019448 , Zm00025a051703
Brachypodium KQJ95978 , KQJ95977
Barley HORVU3Hr1G081920.1 , HORVU3Hr1G081920.3 , HORVU3Hr1G081920.2 , HORVU5Hr1G107380.4 , HORVU5Hr1G107380.5 , HORVU5Hr1G107380.2 , HORVU5Hr1G107380.3 , HORVU5Hr1G107380.1
Wheat TraesCS5D02G456000 , TraesCS5B02G457100 , TraesCS3A02G390100 , TraesCS3D02G379600 , TraesCS5A02G449500 , TraesCS5A02G449500 , TraesCS3B02G418700
Populus -


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cDNA sequences
Sobic.004G075800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G256200 Myb-like DNA-binding domain containing protein, putative, expressed -
2 Sobic.002G207400 auxin-induced protein 5NG4, putative, expressed -
3 Sobic.005G131301 - -
4 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.003G258800 glutamate synthase, chloroplast precursor, putative, expressed K00264: glutamate synthase (NADH)
6 Sobic.002G083600 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
7 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
8 Sobic.008G072600 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
9 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
10 Sobic.003G095700 glycosyltransferase, putative, expressed -
11 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
12 Sobic.001G240100 xylosyltransferase, putative, expressed -
13 Sobic.008G064601 - -
14 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
15 Sobic.006G117100 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
16 Sobic.009G199601 - -
17 Sobic.001G131001 - -
18 Sobic.009G122300 white-brown complex homolog protein 16, putative, expressed -
19 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
20 Sobic.002G173500 cytokinin-O-glucosyltransferase 1, putative, expressed -


Gene co-expression network
sample Sobic004G075800 Sobic004G075800 Sobic006G256200 Sobic006G256200 Sobic004G075800--Sobic006G256200 Sobic002G207400 Sobic002G207400 Sobic004G075800--Sobic002G207400 Sobic005G131301 Sobic005G131301 Sobic004G075800--Sobic005G131301 Sobic009G221900 Sobic009G221900 Sobic004G075800--Sobic009G221900 Sobic003G258800 Sobic003G258800 Sobic004G075800--Sobic003G258800 Sobic002G083600 Sobic002G083600 Sobic004G075800--Sobic002G083600 Sobic005G115600 Sobic005G115600 Sobic004G075800--Sobic005G115600 Sobic008G072600 Sobic008G072600 Sobic004G075800--Sobic008G072600 Sobic001G263900 Sobic001G263900 Sobic004G075800--Sobic001G263900 Sobic006G256200--Sobic008G072600 Sobic006G256200--Sobic009G221900 Sobic008G091557 Sobic008G091557 Sobic006G256200--Sobic008G091557 Sobic009G017500 Sobic009G017500 Sobic006G256200--Sobic009G017500 Sobic006G249400 Sobic006G249400 Sobic006G256200--Sobic006G249400 Sobic006G256200--Sobic002G083600 Sobic001G208600 Sobic001G208600 Sobic006G256200--Sobic001G208600 Sobic005G071800 Sobic005G071800 Sobic006G256200--Sobic005G071800 Sobic006G256200--Sobic005G115600 Sobic004G202700 Sobic004G202700 Sobic002G207400--Sobic004G202700 Sobic002G207400--Sobic004G075800 Sobic001G169200 Sobic001G169200 Sobic002G207400--Sobic001G169200 Sobic003G237000 Sobic003G237000 Sobic002G207400--Sobic003G237000 Sobic010G156700 Sobic010G156700 Sobic002G207400--Sobic010G156700 Sobic010G146100 Sobic010G146100 Sobic002G207400--Sobic010G146100 Sobic001G260850 Sobic001G260850 Sobic002G207400--Sobic001G260850 Sobic008G074500 Sobic008G074500 Sobic002G207400--Sobic008G074500 Sobic005G086300 Sobic005G086300 Sobic002G207400--Sobic005G086300 Sobic009G246100 Sobic009G246100 Sobic005G131301--Sobic009G246100 Sobic005G131200 Sobic005G131200 Sobic005G131301--Sobic005G131200 Sobic002G081850 Sobic002G081850 Sobic005G131301--Sobic002G081850 Sobic005G197350 Sobic005G197350 Sobic005G131301--Sobic005G197350 Sobic005G066300 Sobic005G066300 Sobic005G131301--Sobic005G066300 Sobic005G066500 Sobic005G066500 Sobic005G131301--Sobic005G066500 Sobic001G163800 Sobic001G163800 Sobic005G131301--Sobic001G163800 Sobic007G119750 Sobic007G119750 Sobic005G131301--Sobic007G119750 Sobic005G066200 Sobic005G066200 Sobic005G131301--Sobic005G066200 Sobic009G221900--Sobic001G263900 Sobic002G347300 Sobic002G347300 Sobic009G221900--Sobic002G347300 Sobic009G221900--Sobic009G017500 Sobic003G099166 Sobic003G099166 Sobic009G221900--Sobic003G099166 Sobic003G371400 Sobic003G371400 Sobic009G221900--Sobic003G371400 Sobic009G221900--Sobic008G091557 Sobic009G221900--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic009G221900--Sobic002G030800 Sobic002G207000 Sobic002G207000 Sobic009G221900--Sobic002G207000 Sobic003G258800--Sobic005G115600 Sobic003G258800--Sobic005G071800 Sobic003G258800--Sobic002G083600 Sobic010G055100 Sobic010G055100 Sobic003G258800--Sobic010G055100 Sobic003G258800--Sobic006G256200 Sobic002G383900 Sobic002G383900 Sobic003G258800--Sobic002G383900 Sobic006G030800 Sobic006G030800 Sobic003G258800--Sobic006G030800 Sobic005G110541 Sobic005G110541 Sobic003G258800--Sobic005G110541 Sobic003G258800--Sobic008G072600 Sobic002G083600--Sobic003G371400 Sobic005G112000 Sobic005G112000 Sobic002G083600--Sobic005G112000 Sobic002G083600--Sobic009G221900 Sobic001G402400 Sobic001G402400 Sobic002G083600--Sobic001G402400 Sobic007G064900 Sobic007G064900 Sobic002G083600--Sobic007G064900 Sobic002G083600--Sobic002G207000 Sobic010G234300 Sobic010G234300 Sobic002G083600--Sobic010G234300 Sobic005G012800 Sobic005G012800 Sobic002G083600--Sobic005G012800 Sobic001G365200 Sobic001G365200 Sobic002G083600--Sobic001G365200 Sobic005G115600--Sobic006G030800 Sobic005G115600--Sobic009G017500 Sobic003G279800 Sobic003G279800 Sobic005G115600--Sobic003G279800 Sobic005G115600--Sobic002G383900 Sobic003G157700 Sobic003G157700 Sobic005G115600--Sobic003G157700 Sobic005G115600--Sobic002G083600 Sobic005G115600--Sobic006G256200 Sobic005G115600--Sobic003G258800 Sobic003G105000 Sobic003G105000 Sobic005G115600--Sobic003G105000 Sobic008G072600--Sobic006G256200 Sobic008G072600--Sobic009G017500 Sobic008G072600--Sobic008G091557 Sobic008G072600--Sobic009G221900 Sobic009G063400 Sobic009G063400 Sobic008G072600--Sobic009G063400 Sobic005G107500 Sobic005G107500 Sobic008G072600--Sobic005G107500 Sobic007G038600 Sobic007G038600 Sobic008G072600--Sobic007G038600 Sobic008G072600--Sobic001G263900 Sobic010G096100 Sobic010G096100 Sobic008G072600--Sobic010G096100 Sobic001G263900--Sobic009G221900 Sobic001G263900--Sobic003G099166 Sobic001G250100 Sobic001G250100 Sobic001G263900--Sobic001G250100 Sobic001G263900--Sobic009G017500 Sobic001G263900--Sobic002G383900 Sobic001G263900--Sobic002G030800 Sobic001G471800 Sobic001G471800 Sobic001G263900--Sobic001G471800 Sobic002G085800 Sobic002G085800 Sobic001G263900--Sobic002G085800 Sobic007G047300 Sobic007G047300 Sobic001G263900--Sobic007G047300
Octagon: transcription factors


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