Gene annotation
| Transcriptome id | Sobic.006G117100.1,Sobic.006G117100.2 |
|---|---|
| Synonym | BGLU12, Sb06g019840 |
| Functional annotation | Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed |
| UniProt | A0A1Z5RDW0 , C5YAD5 |
| Pfam | PF00232 |
| Panther DB | PTHR10353 PTHR10353:SF47 |
| NCBI CDD | - |
| KEGG Orthology | K01188; beta-glucosidase |
| Gene Ontology | GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds |
Orthologs (automatic annotation)
| TAIR | AT5G42260 : beta glucosidase 13,beta glucosidase 12 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g39880.1 : Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed |
| MaizeGDB (Corn) | Zm00025a018259 |
| Brachypodium | PNT61292 |
| Barley | HORVU2Hr1G082170.14 , HORVU2Hr1G082170.16 , HORVU2Hr1G082170.11 , HORVU2Hr1G082170.12 , HORVU2Hr1G082170.13 , HORVU2Hr1G082170.23 , HORVU2Hr1G082170.24 , HORVU2Hr1G082170.29 , HORVU2Hr1G082170.15 , HORVU2Hr1G082170.32 , HORVU7Hr1G091730.1 , HORVU7Hr1G091730.3 , HORVU7Hr1G091730.2 , HORVU7Hr1G091730.4 |
| Wheat | TraesCS4A02G056400 , TraesCS2D02G333700 , TraesCS2D02G333700 , TraesCS2D02G522700 , TraesCS7B02G289100 , TraesCS5B02G295000 , TraesCS5B02G295000 , TraesCS5B02G295000 , TraesCS5B02G295000 , TraesCS4D02G248000 , TraesCS4D02G248000 , TraesCS2A02G329100 , TraesCS2B02G353400 , TraesCS7D02G382800 , TraesCS2B02G353200 , TraesCS2D02G333800 , TraesCS2A02G521000 , TraesCS2A02G521000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G514700 | "Cytochrome P450, family 78,"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed | - |
| 2 | Sobic.003G426200 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 3 | Sobic.005G175900 | expressed protein | - |
| 4 | Sobic.007G192000 | ACR5, putative, expressed | - |
| 5 | Sobic.009G204900 | receptor-like protein kinase, putative, expressed | - |
| 6 | Sobic.006G031100 | CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed | - |
| 7 | Sobic.003G215300 | pleiotropic drug resistance protein, putative, expressed | - |
| 8 | Sobic.007G090600 | CSLC3 - cellulose synthase-like family C, expressed | - |
| 9 | Sobic.006G196400 | U-box, putative, expressed | - |
| 10 | Sobic.010G082000 | xyloglucan fucosyltransferase, putative, expressed | K13681: xyloglucan fucosyltransferase |
| 11 | Sobic.004G121900 | expansin precursor, putative, expressed | - |
| 12 | Sobic.008G099300 | cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed | - |
| 13 | Sobic.001G263300 | glycosyltransferase, putative, expressed | K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase |
| 14 | Sobic.003G240400 | leaf senescence related protein, putative, expressed | - |
| 15 | Sobic.004G106100 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 16 | Sobic.001G299100 | flavonol synthase/flavanone 3-hydroxylase, putative, expressed | - |
| 17 | Sobic.002G146000 | "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed | K09753: cinnamoyl-CoA reductase |
| 18 | Sobic.002G115600 | membrane protein, putative, expressed | - |
| 19 | Sobic.006G205700 | glycosyl hydrolases family 16, putative, expressed | - |
| 20 | Sobic.007G057300 | - | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
