Gene annotation
Transcriptome id Sobic.004G121900.1
Synonym ATEXPA11, ATEXP11, ATHEXPALPHA1.14, EXP11, EXPA11, Sb04g010170
Functional annotation expansin precursor, putative, expressed
UniProt C5XZP2
Pfam PF01357 PF03330
Panther DB PTHR31867:SF19 PTHR31867
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os02g16809.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a019878 , Zm00025a019879 , Zm00025a019850 , Zm00025a019851 , Zm00025a019852 , Zm00025a019856 , Zm00025a019849 , Zm00025a053441
Brachypodium KQJ96857 , KQJ96854 , KQJ94333 , KQJ94332 , KQJ94334 , KQJ94340
Barley HORVU3Hr1G004920.2 , HORVU3Hr1G004920.1 , HORVU3Hr1G076670.2 , HORVU3Hr1G076640.2 , HORVU3Hr1G076640.3 , HORVU3Hr1G076640.1 , HORVU3Hr1G076640.4 , HORVU3Hr1G076670.1 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU7Hr1G092600.3
Wheat TraesCS3A02G031800 , TraesCS3B02G348000 , TraesCS3D02G313200 , TraesCS3A02G160100 , TraesCS3D02G313400 , TraesCS4B02G246400 , TraesCS3A02G317900 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS4D02G245800 , TraesCS3D02G313100 , TraesCS3D02G313300 , TraesCS3A02G160000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G057300 - -
2 Sobic.008G079800 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
3 Sobic.006G117100 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
4 Sobic.008G099300 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
5 Sobic.002G415000 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.003G128800 expansin precursor, putative, expressed -
7 Sobic.004G306900 amino acid transporter, putative, expressed -
8 Sobic.002G195600 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
9 Sobic.006G102300 transporter family protein, putative, expressed -
10 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.004G119800 expansin precursor, putative, expressed -
12 Sobic.007G192000 ACR5, putative, expressed -
13 Sobic.009G204900 receptor-like protein kinase, putative, expressed -
14 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
15 Sobic.003G428300 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@OsRR4 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
16 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
17 Sobic.003G428800 "basic helix-loop-helix (bHLH) transcription factor, downregulates lignin synthesis in Arabidopisis"(PubMedID : 23698629)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Closest homologue of rice OsIRO2.(PubMedID : 16887895)@helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.006G135300 expressed protein -
19 Sobic.005G069000 OsWAK124 - OsWAK receptor-like protein OsWAK-RLP, expressed -
20 Sobic.003G240400 leaf senescence related protein, putative, expressed -


Gene co-expression network
sample Sobic004G121900 Sobic004G121900 Sobic007G057300 Sobic007G057300 Sobic004G121900--Sobic007G057300 Sobic008G079800 Sobic008G079800 Sobic004G121900--Sobic008G079800 Sobic006G117100 Sobic006G117100 Sobic004G121900--Sobic006G117100 Sobic008G099300 Sobic008G099300 Sobic004G121900--Sobic008G099300 Sobic002G415000 Sobic002G415000 Sobic004G121900--Sobic002G415000 Sobic003G128800 Sobic003G128800 Sobic004G121900--Sobic003G128800 Sobic004G306900 Sobic004G306900 Sobic004G121900--Sobic004G306900 Sobic002G195600 Sobic002G195600 Sobic004G121900--Sobic002G195600 Sobic006G102300 Sobic006G102300 Sobic004G121900--Sobic006G102300 Sobic010G031700 Sobic010G031700 Sobic007G057300--Sobic010G031700 Sobic005G216600 Sobic005G216600 Sobic007G057300--Sobic005G216600 Sobic007G037600 Sobic007G037600 Sobic007G057300--Sobic007G037600 Sobic004G121600 Sobic004G121600 Sobic007G057300--Sobic004G121600 Sobic006G097900 Sobic006G097900 Sobic007G057300--Sobic006G097900 Sobic003G007400 Sobic003G007400 Sobic007G057300--Sobic003G007400 Sobic004G009400 Sobic004G009400 Sobic007G057300--Sobic004G009400 Sobic003G322100 Sobic003G322100 Sobic007G057300--Sobic003G322100 Sobic003G053200 Sobic003G053200 Sobic007G057300--Sobic003G053200 Sobic009G225800 Sobic009G225800 Sobic008G079800--Sobic009G225800 Sobic003G426200 Sobic003G426200 Sobic008G079800--Sobic003G426200 Sobic005G079100 Sobic005G079100 Sobic008G079800--Sobic005G079100 Sobic003G167300 Sobic003G167300 Sobic008G079800--Sobic003G167300 Sobic005G046400 Sobic005G046400 Sobic008G079800--Sobic005G046400 Sobic001G499900 Sobic001G499900 Sobic008G079800--Sobic001G499900 Sobic003G441601 Sobic003G441601 Sobic008G079800--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic008G079800--Sobic007G220400 Sobic006G205700 Sobic006G205700 Sobic008G079800--Sobic006G205700 Sobic001G514700 Sobic001G514700 Sobic006G117100--Sobic001G514700 Sobic006G117100--Sobic003G426200 Sobic005G175900 Sobic005G175900 Sobic006G117100--Sobic005G175900 Sobic007G192000 Sobic007G192000 Sobic006G117100--Sobic007G192000 Sobic009G204900 Sobic009G204900 Sobic006G117100--Sobic009G204900 Sobic006G031100 Sobic006G031100 Sobic006G117100--Sobic006G031100 Sobic003G215300 Sobic003G215300 Sobic006G117100--Sobic003G215300 Sobic007G090600 Sobic007G090600 Sobic006G117100--Sobic007G090600 Sobic006G196400 Sobic006G196400 Sobic006G117100--Sobic006G196400 Sobic008G099232 Sobic008G099232 Sobic008G099300--Sobic008G099232 Sobic005G217766 Sobic005G217766 Sobic008G099300--Sobic005G217766 Sobic002G111900 Sobic002G111900 Sobic008G099300--Sobic002G111900 Sobic008G099300--Sobic009G225800 Sobic010G010000 Sobic010G010000 Sobic008G099300--Sobic010G010000 Sobic008G099300--Sobic007G220400 Sobic009G065700 Sobic009G065700 Sobic008G099300--Sobic009G065700 Sobic001G414800 Sobic001G414800 Sobic008G099300--Sobic001G414800 Sobic004G119800 Sobic004G119800 Sobic008G099300--Sobic004G119800 Sobic003G157700 Sobic003G157700 Sobic002G415000--Sobic003G157700 Sobic003G384700 Sobic003G384700 Sobic002G415000--Sobic003G384700 Sobic009G074500 Sobic009G074500 Sobic002G415000--Sobic009G074500 Sobic010G113100 Sobic010G113100 Sobic002G415000--Sobic010G113100 Sobic002G101400 Sobic002G101400 Sobic002G415000--Sobic002G101400 Sobic002G415000--Sobic003G128800 Sobic005G061200 Sobic005G061200 Sobic002G415000--Sobic005G061200 Sobic002G042200 Sobic002G042200 Sobic002G415000--Sobic002G042200 Sobic004G009500 Sobic004G009500 Sobic002G415000--Sobic004G009500 Sobic006G135300 Sobic006G135300 Sobic003G128800--Sobic006G135300 Sobic010G082000 Sobic010G082000 Sobic003G128800--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic003G128800--Sobic006G092700 Sobic010G152400 Sobic010G152400 Sobic003G128800--Sobic010G152400 Sobic007G100700 Sobic007G100700 Sobic003G128800--Sobic007G100700 Sobic003G182200 Sobic003G182200 Sobic003G128800--Sobic003G182200 Sobic004G322100 Sobic004G322100 Sobic003G128800--Sobic004G322100 Sobic003G426500 Sobic003G426500 Sobic003G128800--Sobic003G426500 Sobic003G128800--Sobic004G306900 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic003G064800 Sobic003G064800 Sobic004G306900--Sobic003G064800 Sobic007G086300 Sobic007G086300 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic003G319400 Sobic003G319400 Sobic004G306900--Sobic003G319400 Sobic004G306900--Sobic010G152400 Sobic004G306900--Sobic004G322100 Sobic007G073000 Sobic007G073000 Sobic002G195600--Sobic007G073000 Sobic002G195600--Sobic006G196400 Sobic008G138900 Sobic008G138900 Sobic002G195600--Sobic008G138900 Sobic002G195600--Sobic003G215300 Sobic003G240400 Sobic003G240400 Sobic002G195600--Sobic003G240400 Sobic004G014600 Sobic004G014600 Sobic002G195600--Sobic004G014600 Sobic002G195600--Sobic007G090600 Sobic002G195600--Sobic006G092700 Sobic002G195600--Sobic006G135300 Sobic004G164300 Sobic004G164300 Sobic006G102300--Sobic004G164300 Sobic001G231800 Sobic001G231800 Sobic006G102300--Sobic001G231800 Sobic001G301000 Sobic001G301000 Sobic006G102300--Sobic001G301000 Sobic005G206000 Sobic005G206000 Sobic006G102300--Sobic005G206000 Sobic008G010500 Sobic008G010500 Sobic006G102300--Sobic008G010500 Sobic006G102300--Sobic003G053200 Sobic010G245400 Sobic010G245400 Sobic006G102300--Sobic010G245400 Sobic005G202300 Sobic005G202300 Sobic006G102300--Sobic005G202300 Sobic005G177100 Sobic005G177100 Sobic006G102300--Sobic005G177100
Octagon: transcription factors


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