Gene annotation
Transcriptome id Sobic.006G102300.1
Synonym Sb06g018590
Functional annotation transporter family protein, putative, expressed
UniProt C5Y9Q2
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF45
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G34580 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g38010.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056184 , Zm00025a011152 , Zm00025a013738
Brachypodium KQJ82923 , PNT61205 , PNT61204 , PNT61207 , PNT61206 , PNT61203 , KQJ82917 , KQJ82918 , KQJ82919
Barley HORVU2Hr1G079690.1 , HORVU2Hr1G079690.3 , HORVU2Hr1G079670.2 , HORVU2Hr1G079670.1 , HORVU2Hr1G079690.4
Wheat TraesCS2A02G340800 , TraesCS2B02G338600 , TraesCS2A02G341400 , TraesCS2D02G318400 , TraesCS2B02G338500 , TraesCS2D02G318300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G164300 - -
2 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
4 Sobic.005G206000 dirigent, putative, expressed -
5 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
9 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
10 Sobic.005G072900 stress responsive protein, putative, expressed -
11 Sobic.004G121600 expansin precursor, putative, expressed -
12 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
13 Sobic.006G277700 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.007G057300 - -
15 Sobic.010G031700 thaumatin, putative, expressed -
16 Sobic.010G268700 expansin precursor, putative, expressed -
17 Sobic.004G121800 expansin precursor, putative, expressed -
18 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
19 Sobic.003G007400 expressed protein -
20 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic006G102300 Sobic006G102300 Sobic004G164300 Sobic004G164300 Sobic006G102300--Sobic004G164300 Sobic001G231800 Sobic001G231800 Sobic006G102300--Sobic001G231800 Sobic001G301000 Sobic001G301000 Sobic006G102300--Sobic001G301000 Sobic005G206000 Sobic005G206000 Sobic006G102300--Sobic005G206000 Sobic008G010500 Sobic008G010500 Sobic006G102300--Sobic008G010500 Sobic003G053200 Sobic003G053200 Sobic006G102300--Sobic003G053200 Sobic010G245400 Sobic010G245400 Sobic006G102300--Sobic010G245400 Sobic005G202300 Sobic005G202300 Sobic006G102300--Sobic005G202300 Sobic005G177100 Sobic005G177100 Sobic006G102300--Sobic005G177100 Sobic004G164300--Sobic001G301000 Sobic004G164300--Sobic008G010500 Sobic001G014700 Sobic001G014700 Sobic004G164300--Sobic001G014700 Sobic004G164300--Sobic001G231800 Sobic008G164450 Sobic008G164450 Sobic004G164300--Sobic008G164450 Sobic004G164300--Sobic005G202300 Sobic004G121600 Sobic004G121600 Sobic004G164300--Sobic004G121600 Sobic005G119900 Sobic005G119900 Sobic004G164300--Sobic005G119900 Sobic006G251400 Sobic006G251400 Sobic004G164300--Sobic006G251400 Sobic001G231800--Sobic001G301000 Sobic001G231800--Sobic008G010500 Sobic001G231800--Sobic010G245400 Sobic001G231800--Sobic005G119900 Sobic003G441700 Sobic003G441700 Sobic001G231800--Sobic003G441700 Sobic001G231800--Sobic004G121600 Sobic001G231800--Sobic003G053200 Sobic010G268700 Sobic010G268700 Sobic001G231800--Sobic010G268700 Sobic003G357700 Sobic003G357700 Sobic001G231800--Sobic003G357700 Sobic001G301000--Sobic001G231800 Sobic001G301000--Sobic008G010500 Sobic001G301000--Sobic004G121600 Sobic001G301000--Sobic003G441700 Sobic001G301000--Sobic005G119900 Sobic001G301000--Sobic003G053200 Sobic001G301000--Sobic010G268700 Sobic001G301000--Sobic010G245400 Sobic006G097900 Sobic006G097900 Sobic001G301000--Sobic006G097900 Sobic005G206000--Sobic001G301000 Sobic005G206000--Sobic010G268700 Sobic005G206000--Sobic008G010500 Sobic005G206000--Sobic001G231800 Sobic005G206000--Sobic005G177100 Sobic005G206000--Sobic010G245400 Sobic005G206000--Sobic006G097900 Sobic003G053600 Sobic003G053600 Sobic005G206000--Sobic003G053600 Sobic004G002901 Sobic004G002901 Sobic005G206000--Sobic004G002901 Sobic008G010500--Sobic001G301000 Sobic008G010500--Sobic001G231800 Sobic008G010500--Sobic004G121600 Sobic008G010500--Sobic010G268700 Sobic008G010500--Sobic005G119900 Sobic008G010500--Sobic005G206000 Sobic008G010500--Sobic003G441700 Sobic008G010500--Sobic010G245400 Sobic008G010500--Sobic003G053200 Sobic003G441800 Sobic003G441800 Sobic003G053200--Sobic003G441800 Sobic003G053200--Sobic003G441700 Sobic003G053200--Sobic001G301000 Sobic003G053200--Sobic004G121600 Sobic010G031700 Sobic010G031700 Sobic003G053200--Sobic010G031700 Sobic003G053200--Sobic005G119900 Sobic004G029400 Sobic004G029400 Sobic003G053200--Sobic004G029400 Sobic003G053200--Sobic001G231800 Sobic007G037600 Sobic007G037600 Sobic003G053200--Sobic007G037600 Sobic010G245400--Sobic001G231800 Sobic010G245400--Sobic001G301000 Sobic005G216400 Sobic005G216400 Sobic010G245400--Sobic005G216400 Sobic010G245400--Sobic010G268700 Sobic010G245400--Sobic005G119900 Sobic005G060200 Sobic005G060200 Sobic010G245400--Sobic005G060200 Sobic007G212000 Sobic007G212000 Sobic010G245400--Sobic007G212000 Sobic010G245400--Sobic003G357700 Sobic010G245400--Sobic008G010500 Sobic006G106900 Sobic006G106900 Sobic005G202300--Sobic006G106900 Sobic003G319400 Sobic003G319400 Sobic005G202300--Sobic003G319400 Sobic003G280000 Sobic003G280000 Sobic005G202300--Sobic003G280000 Sobic009G181600 Sobic009G181600 Sobic005G202300--Sobic009G181600 Sobic005G202300--Sobic003G053200 Sobic005G202300--Sobic010G031700 Sobic003G353200 Sobic003G353200 Sobic005G202300--Sobic003G353200 Sobic005G202300--Sobic004G029400 Sobic001G058300 Sobic001G058300 Sobic005G202300--Sobic001G058300 Sobic005G177100--Sobic005G206000 Sobic007G177400 Sobic007G177400 Sobic005G177100--Sobic007G177400 Sobic007G064500 Sobic007G064500 Sobic005G177100--Sobic007G064500 Sobic005G177100--Sobic008G010500 Sobic005G177100--Sobic001G231800 Sobic004G346300 Sobic004G346300 Sobic005G177100--Sobic004G346300 Sobic005G162400 Sobic005G162400 Sobic005G177100--Sobic005G162400 Sobic002G366200 Sobic002G366200 Sobic005G177100--Sobic002G366200 Sobic005G177100--Sobic010G245400
Octagon: transcription factors


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