Gene annotation
Transcriptome id Sobic.005G177100.1
Synonym CHIA, ATCHIA
Functional annotation glycosyl hydrolase, putative, expressed
UniProt A0A1B6PT99
Pfam PF00704
Panther DB PTHR11177 PTHR11177:SF214
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24090 : chitinase A
RAP-DB (Rice) LOC_Os11g47520.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a045187 , Zm00025a029435
Brachypodium KQJ91843 , KQJ91845
Barley HORVU2Hr1G006130.1 , HORVU5Hr1G081460.1 , HORVU5Hr1G081460.2 , HORVU5Hr1G081460.3 , HORVU5Hr1G081460.4
Wheat TraesCS4D02G142000 , TraesCS1B02G064600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G206000 dirigent, putative, expressed -
2 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
3 Sobic.007G064500 peptide transporter PTR2, putative, expressed -
4 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.004G346300 expressed protein -
7 Sobic.005G162400 GATA transcription factor 25, putative, expressed -
8 Sobic.002G366200 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
11 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
13 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
14 Sobic.002G028632 - -
15 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.010G268700 expansin precursor, putative, expressed -
17 Sobic.002G025500 expressed protein -
18 Sobic.005G105700 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
19 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
20 Sobic.001G378500 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic005G177100 Sobic005G177100 Sobic005G206000 Sobic005G206000 Sobic005G177100--Sobic005G206000 Sobic007G177400 Sobic007G177400 Sobic005G177100--Sobic007G177400 Sobic007G064500 Sobic007G064500 Sobic005G177100--Sobic007G064500 Sobic008G010500 Sobic008G010500 Sobic005G177100--Sobic008G010500 Sobic001G231800 Sobic001G231800 Sobic005G177100--Sobic001G231800 Sobic004G346300 Sobic004G346300 Sobic005G177100--Sobic004G346300 Sobic005G162400 Sobic005G162400 Sobic005G177100--Sobic005G162400 Sobic002G366200 Sobic002G366200 Sobic005G177100--Sobic002G366200 Sobic010G245400 Sobic010G245400 Sobic005G177100--Sobic010G245400 Sobic001G301000 Sobic001G301000 Sobic005G206000--Sobic001G301000 Sobic010G268700 Sobic010G268700 Sobic005G206000--Sobic010G268700 Sobic005G206000--Sobic008G010500 Sobic005G206000--Sobic001G231800 Sobic005G206000--Sobic005G177100 Sobic005G206000--Sobic010G245400 Sobic006G097900 Sobic006G097900 Sobic005G206000--Sobic006G097900 Sobic003G053600 Sobic003G053600 Sobic005G206000--Sobic003G053600 Sobic004G002901 Sobic004G002901 Sobic005G206000--Sobic004G002901 Sobic003G357700 Sobic003G357700 Sobic007G177400--Sobic003G357700 Sobic007G177400--Sobic002G366200 Sobic007G177400--Sobic004G346300 Sobic003G443700 Sobic003G443700 Sobic007G177400--Sobic003G443700 Sobic007G177400--Sobic007G064500 Sobic002G028632 Sobic002G028632 Sobic007G177400--Sobic002G028632 Sobic005G216400 Sobic005G216400 Sobic007G177400--Sobic005G216400 Sobic003G023600 Sobic003G023600 Sobic007G177400--Sobic003G023600 Sobic002G025500 Sobic002G025500 Sobic007G177400--Sobic002G025500 Sobic007G064500--Sobic007G177400 Sobic007G064500--Sobic002G366200 Sobic007G064500--Sobic002G028632 Sobic007G064500--Sobic005G177100 Sobic007G064500--Sobic002G025500 Sobic007G064500--Sobic003G443700 Sobic001G378500 Sobic001G378500 Sobic007G064500--Sobic001G378500 Sobic007G064500--Sobic004G346300 Sobic007G064500--Sobic003G357700 Sobic008G010500--Sobic001G301000 Sobic008G010500--Sobic001G231800 Sobic004G121600 Sobic004G121600 Sobic008G010500--Sobic004G121600 Sobic008G010500--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic008G010500--Sobic005G119900 Sobic008G010500--Sobic005G206000 Sobic003G441700 Sobic003G441700 Sobic008G010500--Sobic003G441700 Sobic008G010500--Sobic010G245400 Sobic003G053200 Sobic003G053200 Sobic008G010500--Sobic003G053200 Sobic001G231800--Sobic001G301000 Sobic001G231800--Sobic008G010500 Sobic001G231800--Sobic010G245400 Sobic001G231800--Sobic005G119900 Sobic001G231800--Sobic003G441700 Sobic001G231800--Sobic004G121600 Sobic001G231800--Sobic003G053200 Sobic001G231800--Sobic010G268700 Sobic001G231800--Sobic003G357700 Sobic004G346300--Sobic003G443700 Sobic004G346300--Sobic003G357700 Sobic004G346300--Sobic005G216400 Sobic005G060200 Sobic005G060200 Sobic004G346300--Sobic005G060200 Sobic004G346300--Sobic007G177400 Sobic004G346300--Sobic004G002901 Sobic007G212000 Sobic007G212000 Sobic004G346300--Sobic007G212000 Sobic004G346300--Sobic003G023600 Sobic004G346300--Sobic002G025500 Sobic005G220300 Sobic005G220300 Sobic005G162400--Sobic005G220300 Sobic002G178101 Sobic002G178101 Sobic005G162400--Sobic002G178101 Sobic005G162400--Sobic003G443700 Sobic007G042600 Sobic007G042600 Sobic005G162400--Sobic007G042600 Sobic006G015300 Sobic006G015300 Sobic005G162400--Sobic006G015300 Sobic005G162400--Sobic004G346300 Sobic002G178000 Sobic002G178000 Sobic005G162400--Sobic002G178000 Sobic005G162400--Sobic007G177400 Sobic005G162400--Sobic005G216400 Sobic002G366200--Sobic002G028632 Sobic002G366200--Sobic003G357700 Sobic002G366200--Sobic007G177400 Sobic002G366200--Sobic003G443700 Sobic002G366200--Sobic002G025500 Sobic002G366200--Sobic007G064500 Sobic002G366200--Sobic008G010500 Sobic002G366200--Sobic005G216400 Sobic002G366200--Sobic005G119900 Sobic010G245400--Sobic001G231800 Sobic010G245400--Sobic001G301000 Sobic010G245400--Sobic005G216400 Sobic010G245400--Sobic010G268700 Sobic010G245400--Sobic005G119900 Sobic010G245400--Sobic005G060200 Sobic010G245400--Sobic007G212000 Sobic010G245400--Sobic003G357700 Sobic010G245400--Sobic008G010500
Octagon: transcription factors


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