Gene annotation
Transcriptome id Sobic.005G105700.1
Synonym ATCCD8, Sb05g009950, CCD8, MAX4
Functional annotation beta,beta-carotene 9,10-dioxygenase, putative, expressed
UniProt C5Y203
Pfam PF03055
Panther DB PTHR10543 PTHR10543:SF50
NCBI CDD KOG1285; Beta, beta-carotene 15,15'-dioxygenase and related enzymes
KEGG Orthology K17913; carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32810 : carotenoid cleavage dioxygenase 8
RAP-DB (Rice) LOC_Os01g38580.1 : beta,beta-carotene 9,10-dioxygenase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
2 Sobic.006G015300 expressed protein -
3 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
4 Sobic.003G023600 peptide-N4-asparagine amidase A, putative, expressed -
5 Sobic.005G202800 - -
6 Sobic.004G346300 expressed protein -
7 Sobic.003G419200 xylanase inhibitor, putative, expressed -
8 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.005G162400 GATA transcription factor 25, putative, expressed -
10 Sobic.005G060200 cytochrome P450, putative, expressed -
11 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
13 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.002G178200 - -
15 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
16 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
17 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
18 Sobic.007G042600 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
19 Sobic.002G178101 - -
20 Sobic.001G271300 expressed protein -


Gene co-expression network
sample Sobic005G105700 Sobic005G105700 Sobic007G177400 Sobic007G177400 Sobic005G105700--Sobic007G177400 Sobic006G015300 Sobic006G015300 Sobic005G105700--Sobic006G015300 Sobic004G002901 Sobic004G002901 Sobic005G105700--Sobic004G002901 Sobic003G023600 Sobic003G023600 Sobic005G105700--Sobic003G023600 Sobic005G202800 Sobic005G202800 Sobic005G105700--Sobic005G202800 Sobic004G346300 Sobic004G346300 Sobic005G105700--Sobic004G346300 Sobic003G419200 Sobic003G419200 Sobic005G105700--Sobic003G419200 Sobic010G245400 Sobic010G245400 Sobic005G105700--Sobic010G245400 Sobic005G162400 Sobic005G162400 Sobic005G105700--Sobic005G162400 Sobic003G357700 Sobic003G357700 Sobic007G177400--Sobic003G357700 Sobic002G366200 Sobic002G366200 Sobic007G177400--Sobic002G366200 Sobic007G177400--Sobic004G346300 Sobic003G443700 Sobic003G443700 Sobic007G177400--Sobic003G443700 Sobic007G064500 Sobic007G064500 Sobic007G177400--Sobic007G064500 Sobic002G028632 Sobic002G028632 Sobic007G177400--Sobic002G028632 Sobic005G216400 Sobic005G216400 Sobic007G177400--Sobic005G216400 Sobic007G177400--Sobic003G023600 Sobic002G025500 Sobic002G025500 Sobic007G177400--Sobic002G025500 Sobic006G015300--Sobic005G105700 Sobic006G015300--Sobic005G162400 Sobic006G015300--Sobic007G177400 Sobic002G178200 Sobic002G178200 Sobic006G015300--Sobic002G178200 Sobic006G015300--Sobic005G202800 Sobic006G015300--Sobic004G002901 Sobic005G220300 Sobic005G220300 Sobic006G015300--Sobic005G220300 Sobic002G178101 Sobic002G178101 Sobic006G015300--Sobic002G178101 Sobic006G015300--Sobic003G443700 Sobic005G060200 Sobic005G060200 Sobic004G002901--Sobic005G060200 Sobic005G197500 Sobic005G197500 Sobic004G002901--Sobic005G197500 Sobic010G268700 Sobic010G268700 Sobic004G002901--Sobic010G268700 Sobic004G002901--Sobic004G346300 Sobic001G271300 Sobic001G271300 Sobic004G002901--Sobic001G271300 Sobic007G111800 Sobic007G111800 Sobic004G002901--Sobic007G111800 Sobic007G212000 Sobic007G212000 Sobic004G002901--Sobic007G212000 Sobic004G002901--Sobic010G245400 Sobic004G002901--Sobic003G443700 Sobic003G023600--Sobic004G346300 Sobic003G023600--Sobic007G212000 Sobic003G023600--Sobic007G177400 Sobic003G023600--Sobic004G002901 Sobic001G181600 Sobic001G181600 Sobic003G023600--Sobic001G181600 Sobic003G023600--Sobic007G111800 Sobic003G154500 Sobic003G154500 Sobic003G023600--Sobic003G154500 Sobic003G023600--Sobic003G357700 Sobic003G023600--Sobic005G105700 Sobic005G202800--Sobic004G002901 Sobic005G202800--Sobic005G105700 Sobic005G202800--Sobic003G023600 Sobic004G228600 Sobic004G228600 Sobic005G202800--Sobic004G228600 Sobic005G202800--Sobic006G015300 Sobic005G202800--Sobic007G177400 Sobic005G202800--Sobic004G346300 Sobic009G095800 Sobic009G095800 Sobic005G202800--Sobic009G095800 Sobic005G202800--Sobic002G025500 Sobic004G346300--Sobic003G443700 Sobic004G346300--Sobic003G357700 Sobic004G346300--Sobic005G216400 Sobic004G346300--Sobic005G060200 Sobic004G346300--Sobic007G177400 Sobic004G346300--Sobic004G002901 Sobic004G346300--Sobic007G212000 Sobic004G346300--Sobic003G023600 Sobic004G346300--Sobic002G025500 Sobic007G042600 Sobic007G042600 Sobic003G419200--Sobic007G042600 Sobic003G419200--Sobic005G105700 Sobic003G419200--Sobic005G162400 Sobic008G168800 Sobic008G168800 Sobic003G419200--Sobic008G168800 Sobic003G419200--Sobic007G177400 Sobic003G419200--Sobic002G028632 Sobic003G419200--Sobic004G002901 Sobic003G419200--Sobic005G220300 Sobic003G419200--Sobic004G346300 Sobic001G231800 Sobic001G231800 Sobic010G245400--Sobic001G231800 Sobic001G301000 Sobic001G301000 Sobic010G245400--Sobic001G301000 Sobic010G245400--Sobic005G216400 Sobic010G245400--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic010G245400--Sobic005G119900 Sobic010G245400--Sobic005G060200 Sobic010G245400--Sobic007G212000 Sobic010G245400--Sobic003G357700 Sobic008G010500 Sobic008G010500 Sobic010G245400--Sobic008G010500 Sobic005G162400--Sobic005G220300 Sobic005G162400--Sobic002G178101 Sobic005G162400--Sobic003G443700 Sobic005G162400--Sobic007G042600 Sobic005G162400--Sobic006G015300 Sobic005G162400--Sobic004G346300 Sobic002G178000 Sobic002G178000 Sobic005G162400--Sobic002G178000 Sobic005G162400--Sobic007G177400 Sobic005G162400--Sobic005G216400
Octagon: transcription factors


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