Gene annotation
Transcriptome id Sobic.002G207400.1
Synonym Sb02g025190
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt C5XCZ4
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT4G30420 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os09g25770.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a047077
Brachypodium KQJ90304 , PNT64626 , PNT64627
Barley HORVU5Hr1G064010.20 , HORVU5Hr1G064010.2 , HORVU5Hr1G064010.8 , HORVU5Hr1G064010.10 , HORVU5Hr1G064010.11 , HORVU5Hr1G064010.12 , HORVU5Hr1G064010.13 , HORVU5Hr1G064010.14 , HORVU5Hr1G064010.15 , HORVU5Hr1G064010.16 , HORVU5Hr1G064010.17 , HORVU5Hr1G064010.18 , HORVU5Hr1G064010.19 , HORVU5Hr1G064010.21 , HORVU5Hr1G064010.23 , HORVU5Hr1G064010.22 , HORVU5Hr1G064010.3 , HORVU5Hr1G064010.1 , HORVU5Hr1G064010.6 , HORVU5Hr1G064010.7 , HORVU5Hr1G064010.4 , HORVU5Hr1G064010.5 , HORVU5Hr1G064010.9
Wheat TraesCS5B02G219600 , TraesCS5D02G228500 , TraesCS5A02G220500 , TraesCS5A02G220500
Populus -


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cDNA sequences
Sobic.002G207400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G202700 expressed protein K10268: F-box and leucine-rich repeat protein 2/20
2 Sobic.004G075800 chloride channel protein, putative, expressed K05016: chloride channel 7
3 Sobic.001G169200 "domain confirmed by Pfam database, expression induced by BR treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
4 Sobic.003G237000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed -
5 Sobic.010G156700 zinc finger, C3HC4 type domain containing protein, expressed K19038: E3 ubiquitin-protein ligase ATL41
6 Sobic.010G146100 aquaporin protein, putative, expressed K09873: aquaporin TIP
7 Sobic.001G260850 - -
8 Sobic.008G074500 Probable leucine-rich repeat receptor-like protein kinase At5g49770(PubMedID : 31721651)@leucine-rich repeat family protein, putative, expressed -
9 Sobic.005G086300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ANTH domain containing protein, expressed -
10 Sobic.010G214600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloride transporter, chloride channel family, putative, expressed K05016: chloride channel 7
11 Sobic.004G201400 cadmium tolerance factor, putative, expressed -
12 Sobic.005G204000 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
13 Sobic.008G117300 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
14 Sobic.003G385700 - -
15 Sobic.005G203900 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
16 Sobic.006G026800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
17 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
18 Sobic.009G107020 - -
19 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
20 Sobic.002G328100 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic002G207400 Sobic002G207400 Sobic004G202700 Sobic004G202700 Sobic002G207400--Sobic004G202700 Sobic004G075800 Sobic004G075800 Sobic002G207400--Sobic004G075800 Sobic001G169200 Sobic001G169200 Sobic002G207400--Sobic001G169200 Sobic003G237000 Sobic003G237000 Sobic002G207400--Sobic003G237000 Sobic010G156700 Sobic010G156700 Sobic002G207400--Sobic010G156700 Sobic010G146100 Sobic010G146100 Sobic002G207400--Sobic010G146100 Sobic001G260850 Sobic001G260850 Sobic002G207400--Sobic001G260850 Sobic008G074500 Sobic008G074500 Sobic002G207400--Sobic008G074500 Sobic005G086300 Sobic005G086300 Sobic002G207400--Sobic005G086300 Sobic005G064800 Sobic005G064800 Sobic004G202700--Sobic005G064800 Sobic002G339500 Sobic002G339500 Sobic004G202700--Sobic002G339500 Sobic002G281800 Sobic002G281800 Sobic004G202700--Sobic002G281800 Sobic004G028000 Sobic004G028000 Sobic004G202700--Sobic004G028000 Sobic007G029100 Sobic007G029100 Sobic004G202700--Sobic007G029100 Sobic001G427500 Sobic001G427500 Sobic004G202700--Sobic001G427500 Sobic010G265800 Sobic010G265800 Sobic004G202700--Sobic010G265800 Sobic006G004600 Sobic006G004600 Sobic004G202700--Sobic006G004600 Sobic001G004700 Sobic001G004700 Sobic004G202700--Sobic001G004700 Sobic006G256200 Sobic006G256200 Sobic004G075800--Sobic006G256200 Sobic004G075800--Sobic002G207400 Sobic005G131301 Sobic005G131301 Sobic004G075800--Sobic005G131301 Sobic009G221900 Sobic009G221900 Sobic004G075800--Sobic009G221900 Sobic003G258800 Sobic003G258800 Sobic004G075800--Sobic003G258800 Sobic002G083600 Sobic002G083600 Sobic004G075800--Sobic002G083600 Sobic005G115600 Sobic005G115600 Sobic004G075800--Sobic005G115600 Sobic008G072600 Sobic008G072600 Sobic004G075800--Sobic008G072600 Sobic001G263900 Sobic001G263900 Sobic004G075800--Sobic001G263900 Sobic003G163700 Sobic003G163700 Sobic001G169200--Sobic003G163700 Sobic003G163500 Sobic003G163500 Sobic001G169200--Sobic003G163500 Sobic001G169200--Sobic005G086300 Sobic005G111200 Sobic005G111200 Sobic001G169200--Sobic005G111200 Sobic009G171300 Sobic009G171300 Sobic001G169200--Sobic009G171300 Sobic010G214600 Sobic010G214600 Sobic001G169200--Sobic010G214600 Sobic001G066600 Sobic001G066600 Sobic001G169200--Sobic001G066600 Sobic008G117300 Sobic008G117300 Sobic001G169200--Sobic008G117300 Sobic005G099700 Sobic005G099700 Sobic001G169200--Sobic005G099700 Sobic001G321600 Sobic001G321600 Sobic003G237000--Sobic001G321600 Sobic002G195700 Sobic002G195700 Sobic003G237000--Sobic002G195700 Sobic001G019300 Sobic001G019300 Sobic003G237000--Sobic001G019300 Sobic001G145050 Sobic001G145050 Sobic003G237000--Sobic001G145050 Sobic002G142066 Sobic002G142066 Sobic003G237000--Sobic002G142066 Sobic001G005500 Sobic001G005500 Sobic003G237000--Sobic001G005500 Sobic008G073400 Sobic008G073400 Sobic003G237000--Sobic008G073400 Sobic003G291400 Sobic003G291400 Sobic003G237000--Sobic003G291400 Sobic001G520100 Sobic001G520100 Sobic003G237000--Sobic001G520100 Sobic010G156700--Sobic010G146100 Sobic007G221400 Sobic007G221400 Sobic010G156700--Sobic007G221400 Sobic006G026800 Sobic006G026800 Sobic010G156700--Sobic006G026800 Sobic005G204000 Sobic005G204000 Sobic010G156700--Sobic005G204000 Sobic010G156700--Sobic008G117300 Sobic004G071750 Sobic004G071750 Sobic010G156700--Sobic004G071750 Sobic010G156700--Sobic001G260850 Sobic001G160700 Sobic001G160700 Sobic010G156700--Sobic001G160700 Sobic010G146100--Sobic004G071750 Sobic010G146100--Sobic001G160700 Sobic001G260850--Sobic005G204000 Sobic005G203900 Sobic005G203900 Sobic001G260850--Sobic005G203900 Sobic001G260850--Sobic008G117300 Sobic001G435500 Sobic001G435500 Sobic001G260850--Sobic001G435500 Sobic010G128000 Sobic010G128000 Sobic001G260850--Sobic010G128000 Sobic002G337001 Sobic002G337001 Sobic001G260850--Sobic002G337001 Sobic003G369000 Sobic003G369000 Sobic001G260850--Sobic003G369000 Sobic008G036350 Sobic008G036350 Sobic001G260850--Sobic008G036350 Sobic001G260850--Sobic001G066600 Sobic001G162200 Sobic001G162200 Sobic008G074500--Sobic001G162200 Sobic009G038200 Sobic009G038200 Sobic008G074500--Sobic009G038200 Sobic008G074500--Sobic003G237000 Sobic002G209100 Sobic002G209100 Sobic008G074500--Sobic002G209100 Sobic009G233900 Sobic009G233900 Sobic008G074500--Sobic009G233900 Sobic008G074500--Sobic001G321600 Sobic005G093400 Sobic005G093400 Sobic008G074500--Sobic005G093400 Sobic004G197800 Sobic004G197800 Sobic008G074500--Sobic004G197800 Sobic009G153200 Sobic009G153200 Sobic008G074500--Sobic009G153200 Sobic005G086300--Sobic001G169200 Sobic009G110200 Sobic009G110200 Sobic005G086300--Sobic009G110200 Sobic009G049850 Sobic009G049850 Sobic005G086300--Sobic009G049850 Sobic005G086300--Sobic006G026800 Sobic010G179800 Sobic010G179800 Sobic005G086300--Sobic010G179800 Sobic005G086300--Sobic004G071750 Sobic005G086300--Sobic001G160700
Octagon: transcription factors


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