Gene annotation
Transcriptome id Sobic.002G367700.2,Sobic.002G367700.1
Synonym PTR2, PTR2-B, ATPTR2, NTR1, Sb02g038680, ATPTR2-B
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1W0W743 , C5XDV3
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF122
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G02040 : peptide transporter 2
RAP-DB (Rice) LOC_Os07g41250.2 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a015174
Brachypodium PNT74796 , KQK15352 , KQK15351
Barley HORVU2Hr1G032920.4 , HORVU2Hr1G032920.5 , HORVU2Hr1G032920.2 , HORVU2Hr1G032920.3 , HORVU2Hr1G032920.1
Wheat TraesCS2A02G175600 , TraesCS2D02G182900
Populus -


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cDNA sequences
Sobic.002G367700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G241350 - -
2 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
3 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
4 Sobic.006G051100 expressed protein -
5 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.004G325900 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
7 Sobic.002G016300 MYB family transcription factor, putative, expressed -
8 Sobic.007G028700 LSD1 zinc finger domain containing protein, expressed -
9 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
10 Sobic.004G279700 expressed protein -
11 Sobic.002G133100 prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
12 Sobic.006G197800 zinc-binding protein, putative, expressed -
13 Sobic.001G169200 "domain confirmed by Pfam database, expression induced by BR treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
14 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
15 Sobic.003G400200 plant-specific domain TIGR01615 family protein, expressed -
16 Sobic.002G376000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
17 Sobic.003G320600 membrane protein, putative, expressed -
18 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
19 Sobic.009G129500 cyclin, putative, expressed -
20 Sobic.010G179800 OsFBK16 - F-box domain and kelch repeat containing protein, expressed -


Gene co-expression network
sample Sobic002G367700 Sobic002G367700 Sobic006G241350 Sobic006G241350 Sobic002G367700--Sobic006G241350 Sobic003G123300 Sobic003G123300 Sobic002G367700--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic002G367700--Sobic001G078900 Sobic006G051100 Sobic006G051100 Sobic002G367700--Sobic006G051100 Sobic001G465100 Sobic001G465100 Sobic002G367700--Sobic001G465100 Sobic004G325900 Sobic004G325900 Sobic002G367700--Sobic004G325900 Sobic002G016300 Sobic002G016300 Sobic002G367700--Sobic002G016300 Sobic007G028700 Sobic007G028700 Sobic002G367700--Sobic007G028700 Sobic006G241400 Sobic006G241400 Sobic002G367700--Sobic006G241400 Sobic006G241350--Sobic006G241400 Sobic004G279700 Sobic004G279700 Sobic006G241350--Sobic004G279700 Sobic006G241350--Sobic004G325900 Sobic006G241600 Sobic006G241600 Sobic006G241350--Sobic006G241600 Sobic006G241350--Sobic007G028700 Sobic006G241350--Sobic002G367700 Sobic006G241350--Sobic001G078900 Sobic006G241350--Sobic003G123300 Sobic006G241350--Sobic001G465100 Sobic003G013600 Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic003G123300--Sobic001G465100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic003G123300--Sobic006G241350 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic001G078900--Sobic004G325900 Sobic001G078900--Sobic001G465100 Sobic001G078900--Sobic006G241350 Sobic002G226000 Sobic002G226000 Sobic001G078900--Sobic002G226000 Sobic001G078900--Sobic002G367700 Sobic001G078900--Sobic003G123300 Sobic003G178700 Sobic003G178700 Sobic001G078900--Sobic003G178700 Sobic003G147401 Sobic003G147401 Sobic001G078900--Sobic003G147401 Sobic002G380400 Sobic002G380400 Sobic001G078900--Sobic002G380400 Sobic003G320600 Sobic003G320600 Sobic006G051100--Sobic003G320600 Sobic006G051100--Sobic003G123300 Sobic001G093600 Sobic001G093600 Sobic006G051100--Sobic001G093600 Sobic003G107300 Sobic003G107300 Sobic006G051100--Sobic003G107300 Sobic006G279700 Sobic006G279700 Sobic006G051100--Sobic006G279700 Sobic006G051100--Sobic003G178700 Sobic006G051100--Sobic002G367700 Sobic001G225500 Sobic001G225500 Sobic006G051100--Sobic001G225500 Sobic001G191200 Sobic001G191200 Sobic006G051100--Sobic001G191200 Sobic008G042500 Sobic008G042500 Sobic001G465100--Sobic008G042500 Sobic003G391100 Sobic003G391100 Sobic001G465100--Sobic003G391100 Sobic001G465100--Sobic003G123300 Sobic001G465100--Sobic001G078900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic001G465100--Sobic006G241350 Sobic004G096300 Sobic004G096300 Sobic001G465100--Sobic004G096300 Sobic001G053900 Sobic001G053900 Sobic001G465100--Sobic001G053900 Sobic004G325900--Sobic001G078900 Sobic007G154701 Sobic007G154701 Sobic004G325900--Sobic007G154701 Sobic004G325900--Sobic006G241350 Sobic004G325900--Sobic001G465100 Sobic004G325900--Sobic003G147401 Sobic004G325900--Sobic003G123300 Sobic004G325900--Sobic006G241600 Sobic003G379700 Sobic003G379700 Sobic004G325900--Sobic003G379700 Sobic001G032100 Sobic001G032100 Sobic004G325900--Sobic001G032100 Sobic002G016300--Sobic002G367700 Sobic009G024600 Sobic009G024600 Sobic002G016300--Sobic009G024600 Sobic002G016300--Sobic006G241350 Sobic002G016300--Sobic006G051100 Sobic002G328100 Sobic002G328100 Sobic002G016300--Sobic002G328100 Sobic002G016300--Sobic002G376700 Sobic002G016300--Sobic003G123300 Sobic002G016300--Sobic001G078900 Sobic005G096300 Sobic005G096300 Sobic002G016300--Sobic005G096300 Sobic007G028700--Sobic006G241350 Sobic007G028700--Sobic001G465100 Sobic007G028700--Sobic002G367700 Sobic007G028700--Sobic004G325900 Sobic007G028700--Sobic001G032100 Sobic004G221900 Sobic004G221900 Sobic007G028700--Sobic004G221900 Sobic001G247400 Sobic001G247400 Sobic007G028700--Sobic001G247400 Sobic003G296600 Sobic003G296600 Sobic007G028700--Sobic003G296600 Sobic007G028700--Sobic001G078900 Sobic006G241400--Sobic004G279700 Sobic006G241400--Sobic006G241350 Sobic003G400200 Sobic003G400200 Sobic006G241400--Sobic003G400200 Sobic006G241400--Sobic006G241600 Sobic006G241400--Sobic002G421600 Sobic007G126100 Sobic007G126100 Sobic006G241400--Sobic007G126100 Sobic008G036900 Sobic008G036900 Sobic006G241400--Sobic008G036900 Sobic003G395400 Sobic003G395400 Sobic006G241400--Sobic003G395400 Sobic002G254200 Sobic002G254200 Sobic006G241400--Sobic002G254200
Octagon: transcription factors


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