Gene annotation
Transcriptome id Sobic.002G133100.1
Synonym ADT3, PD1, Sb02g011470
Functional annotation prephenate dehydratase domain containing protein, expressed
UniProt C5X5W2
Pfam PF00800
Panther DB PTHR21022 PTHR21022:SF5
NCBI CDD KOG2797; Prephenate dehydratase
KEGG Orthology K05359; ADT, arogenate/prephenate dehydratase
Gene Ontology GO:0009094; L-phenylalanine biosynthetic process GO:0004664prephenate dehydratase activity


Orthologs (automatic annotation)
TAIR AT1G08250 : arogenate dehydratase 6
RAP-DB (Rice) LOC_Os09g39260.1 : prephenate dehydratase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a055985 , Zm00025a013501 , Zm00025a011557
Brachypodium KQJ82451 , KQJ82450 , KQJ91570
Barley HORVU2Hr1G072210.4 , HORVU2Hr1G072210.5 , HORVU2Hr1G072210.6 , HORVU2Hr1G072210.7 , HORVU5Hr1G092190.2 , HORVU2Hr1G072210.1 , HORVU2Hr1G072210.2 , HORVU2Hr1G072210.8 , HORVU5Hr1G092190.1 , HORVU2Hr1G013500.1 , HORVU2Hr1G013500.3 , HORVU2Hr1G013500.2 , HORVU2Hr1G072180.1 , HORVU2Hr1G072180.2
Wheat TraesCS2D02G289900 , TraesCS2D02G080100 , TraesCS2D02G080100 , TraesCS2A02G082200 , TraesCS2B02G096300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G207100 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
2 Sobic.008G064601 - -
3 Sobic.007G171950 - -
4 Sobic.001G202400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
5 Sobic.008G173000 transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
6 Sobic.003G245900 membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.003G052600 - -
8 Sobic.002G333100 transmembrane protein, putative, expressed -
9 Sobic.002G328100 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.006G216000 DAG protein, chloroplast precursor, putative, expressed -
11 Sobic.002G330500 hydrolase, NUDIX family, domain containing protein, expressed K01823: idi, isopentenyl-diphosphate Delta-isomerase
12 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.004G202700 expressed protein K10268: F-box and leucine-rich repeat protein 2/20
14 Sobic.005G155300 BSD domain-containing protein, putative, expressed -
15 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.001G335201 - -
17 Sobic.001G463500 FAD-linked sulfhydryl oxidase ALR, putative, expressed K17783: ERV1, GFER, mitochondrial FAD-linked sulfhydryl oxidase
18 Sobic.001G189600 F-box domain containing protein, expressed -
19 Sobic.001G131100 expressed protein -
20 Sobic.008G135701 - -


Gene co-expression network
sample Sobic002G133100 Sobic002G133100 Sobic009G207100 Sobic009G207100 Sobic002G133100--Sobic009G207100 Sobic008G064601 Sobic008G064601 Sobic002G133100--Sobic008G064601 Sobic007G171950 Sobic007G171950 Sobic002G133100--Sobic007G171950 Sobic001G202400 Sobic001G202400 Sobic002G133100--Sobic001G202400 Sobic008G173000 Sobic008G173000 Sobic002G133100--Sobic008G173000 Sobic003G245900 Sobic003G245900 Sobic002G133100--Sobic003G245900 Sobic003G052600 Sobic003G052600 Sobic002G133100--Sobic003G052600 Sobic002G333100 Sobic002G333100 Sobic002G133100--Sobic002G333100 Sobic002G328100 Sobic002G328100 Sobic002G133100--Sobic002G328100 Sobic009G207100--Sobic002G133100 Sobic001G215500 Sobic001G215500 Sobic009G207100--Sobic001G215500 Sobic009G207100--Sobic007G171950 Sobic009G207100--Sobic001G202400 Sobic005G055000 Sobic005G055000 Sobic009G207100--Sobic005G055000 Sobic009G207100--Sobic002G333100 Sobic001G263000 Sobic001G263000 Sobic009G207100--Sobic001G263000 Sobic003G071600 Sobic003G071600 Sobic009G207100--Sobic003G071600 Sobic004G224700 Sobic004G224700 Sobic009G207100--Sobic004G224700 Sobic010G126100 Sobic010G126100 Sobic008G064601--Sobic010G126100 Sobic009G144200 Sobic009G144200 Sobic008G064601--Sobic009G144200 Sobic008G064601--Sobic002G133100 Sobic009G055900 Sobic009G055900 Sobic008G064601--Sobic009G055900 Sobic008G064601--Sobic003G071600 Sobic008G143600 Sobic008G143600 Sobic008G064601--Sobic008G143600 Sobic010G122200 Sobic010G122200 Sobic008G064601--Sobic010G122200 Sobic008G064601--Sobic003G052600 Sobic008G186500 Sobic008G186500 Sobic008G064601--Sobic008G186500 Sobic008G067100 Sobic008G067100 Sobic007G171950--Sobic008G067100 Sobic001G096300 Sobic001G096300 Sobic007G171950--Sobic001G096300 Sobic007G095500 Sobic007G095500 Sobic007G171950--Sobic007G095500 Sobic002G122600 Sobic002G122600 Sobic007G171950--Sobic002G122600 Sobic001G296400 Sobic001G296400 Sobic007G171950--Sobic001G296400 Sobic010G108900 Sobic010G108900 Sobic007G171950--Sobic010G108900 Sobic007G171950--Sobic009G207100 Sobic007G171950--Sobic001G263000 Sobic003G265500 Sobic003G265500 Sobic007G171950--Sobic003G265500 Sobic003G015400 Sobic003G015400 Sobic001G202400--Sobic003G015400 Sobic007G034400 Sobic007G034400 Sobic001G202400--Sobic007G034400 Sobic008G103900 Sobic008G103900 Sobic001G202400--Sobic008G103900 Sobic001G543300 Sobic001G543300 Sobic001G202400--Sobic001G543300 Sobic001G081400 Sobic001G081400 Sobic001G202400--Sobic001G081400 Sobic001G202400--Sobic009G207100 Sobic002G007100 Sobic002G007100 Sobic001G202400--Sobic002G007100 Sobic003G182400 Sobic003G182400 Sobic001G202400--Sobic003G182400 Sobic009G168000 Sobic009G168000 Sobic001G202400--Sobic009G168000 Sobic001G226100 Sobic001G226100 Sobic008G173000--Sobic001G226100 Sobic010G012600 Sobic010G012600 Sobic008G173000--Sobic010G012600 Sobic006G252100 Sobic006G252100 Sobic008G173000--Sobic006G252100 Sobic008G173000--Sobic001G296400 Sobic004G185600 Sobic004G185600 Sobic008G173000--Sobic004G185600 Sobic010G251100 Sobic010G251100 Sobic008G173000--Sobic010G251100 Sobic008G173000--Sobic001G263000 Sobic003G045400 Sobic003G045400 Sobic008G173000--Sobic003G045400 Sobic006G216000 Sobic006G216000 Sobic008G173000--Sobic006G216000 Sobic001G485600 Sobic001G485600 Sobic003G245900--Sobic001G485600 Sobic001G429300 Sobic001G429300 Sobic003G245900--Sobic001G429300 Sobic003G324100 Sobic003G324100 Sobic003G245900--Sobic003G324100 Sobic009G112400 Sobic009G112400 Sobic003G245900--Sobic009G112400 Sobic010G268300 Sobic010G268300 Sobic003G245900--Sobic010G268300 Sobic003G245900--Sobic002G122600 Sobic008G068601 Sobic008G068601 Sobic003G245900--Sobic008G068601 Sobic003G174800 Sobic003G174800 Sobic003G245900--Sobic003G174800 Sobic006G038400 Sobic006G038400 Sobic003G245900--Sobic006G038400 Sobic001G532700 Sobic001G532700 Sobic003G052600--Sobic001G532700 Sobic005G096000 Sobic005G096000 Sobic003G052600--Sobic005G096000 Sobic003G052600--Sobic009G112400 Sobic004G175600 Sobic004G175600 Sobic003G052600--Sobic004G175600 Sobic008G125100 Sobic008G125100 Sobic003G052600--Sobic008G125100 Sobic002G420300 Sobic002G420300 Sobic003G052600--Sobic002G420300 Sobic003G052600--Sobic003G245900 Sobic002G317800 Sobic002G317800 Sobic003G052600--Sobic002G317800 Sobic002G192500 Sobic002G192500 Sobic003G052600--Sobic002G192500 Sobic003G420900 Sobic003G420900 Sobic002G333100--Sobic003G420900 Sobic002G333100--Sobic010G108900 Sobic006G168400 Sobic006G168400 Sobic002G333100--Sobic006G168400 Sobic002G244500 Sobic002G244500 Sobic002G333100--Sobic002G244500 Sobic001G376700 Sobic001G376700 Sobic002G333100--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic002G333100--Sobic004G296800 Sobic002G333100--Sobic003G265500 Sobic009G124000 Sobic009G124000 Sobic002G333100--Sobic009G124000 Sobic001G463500 Sobic001G463500 Sobic002G333100--Sobic001G463500 Sobic003G049500 Sobic003G049500 Sobic002G328100--Sobic003G049500 Sobic003G368800 Sobic003G368800 Sobic002G328100--Sobic003G368800 Sobic004G147200 Sobic004G147200 Sobic002G328100--Sobic004G147200 Sobic002G328100--Sobic009G112400 Sobic002G328100--Sobic003G245900 Sobic002G328100--Sobic002G133100 Sobic002G328100--Sobic003G052600 Sobic002G259400 Sobic002G259400 Sobic002G328100--Sobic002G259400 Sobic001G144600 Sobic001G144600 Sobic002G328100--Sobic001G144600
Octagon: transcription factors


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