Gene annotation
Transcriptome id Sobic.001G189600.1
Synonym Sb01g016660
Functional annotation F-box domain containing protein, expressed
UniProt C5WV91
Pfam PF12937
Panther DB PTHR24006
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G48880 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os03g36439.1 : F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017398
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G183000 RING zinc finger protein, putative, expressed -
2 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
3 Sobic.001G036700 OsFBX442 - F-box domain containing protein, expressed -
4 Sobic.009G108500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
5 Sobic.006G094600 LSM domain containing protein, expressed K12620: U6 snRNA-associated Sm-like protein LSm1
6 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
7 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
8 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
9 Sobic.001G489700 prenyltransferase, putative, expressed K02257: COX10, ctaB, heme o synthase
10 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
11 Sobic.010G197900 expressed protein -
12 Sobic.003G273400 glycylpeptide N-tetradecanoyltransferase 1, putative, expressed K00671: glycylpeptide N-tetradecanoyltransferase
13 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
14 Sobic.004G164000 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
15 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
16 Sobic.002G268400 expressed protein -
17 Sobic.009G207200 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
18 Sobic.001G392800 NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed K03949: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
19 Sobic.006G126200 alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed K15627: ASPSCR1, tether containing UBX domain for GLUT4
20 Sobic.001G335201 - -


Gene co-expression network
sample Sobic001G189600 Sobic001G189600 Sobic006G183000 Sobic006G183000 Sobic001G189600--Sobic006G183000 Sobic006G109700 Sobic006G109700 Sobic001G189600--Sobic006G109700 Sobic001G036700 Sobic001G036700 Sobic001G189600--Sobic001G036700 Sobic009G108500 Sobic009G108500 Sobic001G189600--Sobic009G108500 Sobic006G094600 Sobic006G094600 Sobic001G189600--Sobic006G094600 Sobic001G294900 Sobic001G294900 Sobic001G189600--Sobic001G294900 Sobic001G532100 Sobic001G532100 Sobic001G189600--Sobic001G532100 Sobic007G192100 Sobic007G192100 Sobic001G189600--Sobic007G192100 Sobic001G489700 Sobic001G489700 Sobic001G189600--Sobic001G489700 Sobic002G129000 Sobic002G129000 Sobic006G183000--Sobic002G129000 Sobic006G183000--Sobic001G294900 Sobic009G033900 Sobic009G033900 Sobic006G183000--Sobic009G033900 Sobic006G183000--Sobic006G109700 Sobic002G268400 Sobic002G268400 Sobic006G183000--Sobic002G268400 Sobic001G136900 Sobic001G136900 Sobic006G183000--Sobic001G136900 Sobic009G050700 Sobic009G050700 Sobic006G183000--Sobic009G050700 Sobic003G405700 Sobic003G405700 Sobic006G183000--Sobic003G405700 Sobic006G183000--Sobic006G094600 Sobic008G137600 Sobic008G137600 Sobic006G109700--Sobic008G137600 Sobic001G444300 Sobic001G444300 Sobic006G109700--Sobic001G444300 Sobic006G109700--Sobic006G183000 Sobic006G109700--Sobic001G294900 Sobic009G168000 Sobic009G168000 Sobic006G109700--Sobic009G168000 Sobic006G211800 Sobic006G211800 Sobic006G109700--Sobic006G211800 Sobic006G231500 Sobic006G231500 Sobic006G109700--Sobic006G231500 Sobic004G348900 Sobic004G348900 Sobic006G109700--Sobic004G348900 Sobic001G502200 Sobic001G502200 Sobic006G109700--Sobic001G502200 Sobic001G036700--Sobic001G532100 Sobic002G176400 Sobic002G176400 Sobic001G036700--Sobic002G176400 Sobic001G036700--Sobic007G192100 Sobic001G285300 Sobic001G285300 Sobic001G036700--Sobic001G285300 Sobic001G036700--Sobic006G094600 Sobic001G126200 Sobic001G126200 Sobic001G036700--Sobic001G126200 Sobic003G131300 Sobic003G131300 Sobic001G036700--Sobic003G131300 Sobic003G420700 Sobic003G420700 Sobic001G036700--Sobic003G420700 Sobic009G086200 Sobic009G086200 Sobic001G036700--Sobic009G086200 Sobic009G108500--Sobic006G183000 Sobic006G087100 Sobic006G087100 Sobic009G108500--Sobic006G087100 Sobic009G108500--Sobic001G532100 Sobic009G108500--Sobic001G189600 Sobic009G108500--Sobic001G294900 Sobic009G108500--Sobic006G109700 Sobic010G108900 Sobic010G108900 Sobic009G108500--Sobic010G108900 Sobic006G225300 Sobic006G225300 Sobic009G108500--Sobic006G225300 Sobic006G203100 Sobic006G203100 Sobic009G108500--Sobic006G203100 Sobic006G094600--Sobic008G137600 Sobic006G011000 Sobic006G011000 Sobic006G094600--Sobic006G011000 Sobic006G094600--Sobic003G131300 Sobic006G094600--Sobic001G294900 Sobic006G094600--Sobic001G126200 Sobic006G094600--Sobic006G183000 Sobic006G094600--Sobic001G285300 Sobic002G428200 Sobic002G428200 Sobic006G094600--Sobic002G428200 Sobic010G205300 Sobic010G205300 Sobic006G094600--Sobic010G205300 Sobic001G294900--Sobic008G137600 Sobic003G349300 Sobic003G349300 Sobic001G294900--Sobic003G349300 Sobic001G294900--Sobic006G225300 Sobic001G439600 Sobic001G439600 Sobic001G294900--Sobic001G439600 Sobic001G294900--Sobic006G183000 Sobic001G294900--Sobic002G129000 Sobic001G458700 Sobic001G458700 Sobic001G294900--Sobic001G458700 Sobic009G135600 Sobic009G135600 Sobic001G294900--Sobic009G135600 Sobic001G294900--Sobic006G109700 Sobic001G532100--Sobic008G137600 Sobic001G532100--Sobic001G036700 Sobic010G193800 Sobic010G193800 Sobic001G532100--Sobic010G193800 Sobic001G532100--Sobic001G285300 Sobic001G532100--Sobic001G294900 Sobic007G152400 Sobic007G152400 Sobic001G532100--Sobic007G152400 Sobic001G532100--Sobic006G225300 Sobic003G043400 Sobic003G043400 Sobic001G532100--Sobic003G043400 Sobic003G273400 Sobic003G273400 Sobic001G532100--Sobic003G273400 Sobic008G108500 Sobic008G108500 Sobic007G192100--Sobic008G108500 Sobic007G192100--Sobic001G036700 Sobic001G402600 Sobic001G402600 Sobic007G192100--Sobic001G402600 Sobic007G192100--Sobic002G176400 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic002G399500 Sobic002G399500 Sobic007G192100--Sobic002G399500 Sobic007G117800 Sobic007G117800 Sobic007G192100--Sobic007G117800 Sobic008G165000 Sobic008G165000 Sobic001G489700--Sobic008G165000 Sobic002G378200 Sobic002G378200 Sobic001G489700--Sobic002G378200 Sobic001G047400 Sobic001G047400 Sobic001G489700--Sobic001G047400 Sobic001G307900 Sobic001G307900 Sobic001G489700--Sobic001G307900 Sobic004G010900 Sobic004G010900 Sobic001G489700--Sobic004G010900 Sobic009G257200 Sobic009G257200 Sobic001G489700--Sobic009G257200 Sobic006G250900 Sobic006G250900 Sobic001G489700--Sobic006G250900 Sobic002G040700 Sobic002G040700 Sobic001G489700--Sobic002G040700 Sobic002G281300 Sobic002G281300 Sobic001G489700--Sobic002G281300
Octagon: transcription factors


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