Gene annotation
Transcriptome id Sobic.006G126200.1
Synonym PUX1, Sb06g020636
Functional annotation alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed
UniProt C5YAW9
Pfam PF00789
Panther DB PTHR23153
NCBI CDD -
KEGG Orthology K15627; ASPSCR1, tether containing UBX domain for GLUT4
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G27310 : plant UBX domain-containing protein 1
RAP-DB (Rice) LOC_Os04g40870.1 : alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed
MaizeGDB (Corn) Zm00025a056330 , Zm00025a010955
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G126200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G183000 RING zinc finger protein, putative, expressed -
2 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
3 Sobic.006G094600 LSM domain containing protein, expressed K12620: U6 snRNA-associated Sm-like protein LSm1
4 Sobic.001G444300 expressed protein -
5 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
6 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
7 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
8 Sobic.004G075200 protein kinase PKN/PRK1, effector, putative, expressed -
9 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
10 Sobic.005G105500 expressed protein -
11 Sobic.006G203100 expressed protein -
12 Sobic.001G370300 WD domain, G-beta repeat domain containing protein, expressed K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
13 Sobic.007G217400 COP9 signalosome complex subunit 6a, putative, expressed K12179: COPS6, COP9 signalosome complex subunit 6
14 Sobic.001G249700 expressed protein K11877: PSMG3, proteasome assembly chaperone 3
15 Sobic.001G285300 expressed protein -
16 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
17 Sobic.009G065200 zinc finger family protein, putative, expressed -
18 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
19 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
20 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other


Gene co-expression network
sample Sobic006G126200 Sobic006G126200 Sobic006G183000 Sobic006G183000 Sobic006G126200--Sobic006G183000 Sobic002G256200 Sobic002G256200 Sobic006G126200--Sobic002G256200 Sobic006G094600 Sobic006G094600 Sobic006G126200--Sobic006G094600 Sobic001G444300 Sobic001G444300 Sobic006G126200--Sobic001G444300 Sobic010G073100 Sobic010G073100 Sobic006G126200--Sobic010G073100 Sobic008G145100 Sobic008G145100 Sobic006G126200--Sobic008G145100 Sobic001G294900 Sobic001G294900 Sobic006G126200--Sobic001G294900 Sobic004G075200 Sobic004G075200 Sobic006G126200--Sobic004G075200 Sobic001G404200 Sobic001G404200 Sobic006G126200--Sobic001G404200 Sobic002G129000 Sobic002G129000 Sobic006G183000--Sobic002G129000 Sobic006G183000--Sobic001G294900 Sobic009G033900 Sobic009G033900 Sobic006G183000--Sobic009G033900 Sobic006G109700 Sobic006G109700 Sobic006G183000--Sobic006G109700 Sobic002G268400 Sobic002G268400 Sobic006G183000--Sobic002G268400 Sobic001G136900 Sobic001G136900 Sobic006G183000--Sobic001G136900 Sobic009G050700 Sobic009G050700 Sobic006G183000--Sobic009G050700 Sobic003G405700 Sobic003G405700 Sobic006G183000--Sobic003G405700 Sobic006G183000--Sobic006G094600 Sobic010G269100 Sobic010G269100 Sobic002G256200--Sobic010G269100 Sobic003G099300 Sobic003G099300 Sobic002G256200--Sobic003G099300 Sobic003G422900 Sobic003G422900 Sobic002G256200--Sobic003G422900 Sobic001G085100 Sobic001G085100 Sobic002G256200--Sobic001G085100 Sobic009G117500 Sobic009G117500 Sobic002G256200--Sobic009G117500 Sobic002G256200--Sobic002G268400 Sobic001G428800 Sobic001G428800 Sobic002G256200--Sobic001G428800 Sobic006G203100 Sobic006G203100 Sobic002G256200--Sobic006G203100 Sobic006G056200 Sobic006G056200 Sobic002G256200--Sobic006G056200 Sobic008G137600 Sobic008G137600 Sobic006G094600--Sobic008G137600 Sobic006G011000 Sobic006G011000 Sobic006G094600--Sobic006G011000 Sobic003G131300 Sobic003G131300 Sobic006G094600--Sobic003G131300 Sobic006G094600--Sobic001G294900 Sobic001G126200 Sobic001G126200 Sobic006G094600--Sobic001G126200 Sobic006G094600--Sobic006G183000 Sobic001G285300 Sobic001G285300 Sobic006G094600--Sobic001G285300 Sobic002G428200 Sobic002G428200 Sobic006G094600--Sobic002G428200 Sobic010G205300 Sobic010G205300 Sobic006G094600--Sobic010G205300 Sobic001G145500 Sobic001G145500 Sobic001G444300--Sobic001G145500 Sobic001G444300--Sobic006G109700 Sobic002G423800 Sobic002G423800 Sobic001G444300--Sobic002G423800 Sobic006G211800 Sobic006G211800 Sobic001G444300--Sobic006G211800 Sobic007G176200 Sobic007G176200 Sobic001G444300--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G444300--Sobic006G252200 Sobic001G444300--Sobic002G428200 Sobic003G104700 Sobic003G104700 Sobic001G444300--Sobic003G104700 Sobic004G348900 Sobic004G348900 Sobic001G444300--Sobic004G348900 Sobic002G113800 Sobic002G113800 Sobic010G073100--Sobic002G113800 Sobic010G073100--Sobic008G145100 Sobic007G184500 Sobic007G184500 Sobic010G073100--Sobic007G184500 Sobic001G033500 Sobic001G033500 Sobic010G073100--Sobic001G033500 Sobic010G073100--Sobic006G203100 Sobic004G010900 Sobic004G010900 Sobic010G073100--Sobic004G010900 Sobic002G281300 Sobic002G281300 Sobic010G073100--Sobic002G281300 Sobic006G044600 Sobic006G044600 Sobic010G073100--Sobic006G044600 Sobic001G010700 Sobic001G010700 Sobic010G073100--Sobic001G010700 Sobic008G145100--Sobic010G073100 Sobic008G145100--Sobic002G423800 Sobic008G110500 Sobic008G110500 Sobic008G145100--Sobic008G110500 Sobic008G145100--Sobic001G444300 Sobic002G029300 Sobic002G029300 Sobic008G145100--Sobic002G029300 Sobic008G145100--Sobic001G033500 Sobic008G145100--Sobic004G010900 Sobic008G145100--Sobic006G203100 Sobic008G129600 Sobic008G129600 Sobic008G145100--Sobic008G129600 Sobic001G294900--Sobic008G137600 Sobic003G349300 Sobic003G349300 Sobic001G294900--Sobic003G349300 Sobic006G225300 Sobic006G225300 Sobic001G294900--Sobic006G225300 Sobic001G439600 Sobic001G439600 Sobic001G294900--Sobic001G439600 Sobic001G294900--Sobic006G183000 Sobic001G294900--Sobic002G129000 Sobic001G458700 Sobic001G458700 Sobic001G294900--Sobic001G458700 Sobic009G135600 Sobic009G135600 Sobic001G294900--Sobic009G135600 Sobic001G294900--Sobic006G109700 Sobic009G207200 Sobic009G207200 Sobic004G075200--Sobic009G207200 Sobic001G469200 Sobic001G469200 Sobic004G075200--Sobic001G469200 Sobic008G125000 Sobic008G125000 Sobic004G075200--Sobic008G125000 Sobic001G467100 Sobic001G467100 Sobic004G075200--Sobic001G467100 Sobic007G047600 Sobic007G047600 Sobic004G075200--Sobic007G047600 Sobic006G029400 Sobic006G029400 Sobic004G075200--Sobic006G029400 Sobic004G256300 Sobic004G256300 Sobic004G075200--Sobic004G256300 Sobic003G008600 Sobic003G008600 Sobic004G075200--Sobic003G008600 Sobic006G245700 Sobic006G245700 Sobic004G075200--Sobic006G245700 Sobic001G404200--Sobic006G094600 Sobic001G332300 Sobic001G332300 Sobic001G404200--Sobic001G332300 Sobic007G118000 Sobic007G118000 Sobic001G404200--Sobic007G118000 Sobic003G374000 Sobic003G374000 Sobic001G404200--Sobic003G374000 Sobic005G184200 Sobic005G184200 Sobic001G404200--Sobic005G184200 Sobic001G404200--Sobic008G110500 Sobic007G014900 Sobic007G014900 Sobic001G404200--Sobic007G014900 Sobic003G148900 Sobic003G148900 Sobic001G404200--Sobic003G148900 Sobic001G404200--Sobic008G145100
Octagon: transcription factors


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