Gene annotation
Transcriptome id Sobic.001G036700.1
Synonym Sb01g003390
Functional annotation OsFBX442 - F-box domain containing protein, expressed
UniProt C5WV29
Pfam -
Panther DB PTHR35828 PTHR35828:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g12200.1 : OsFBX380 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK12458
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
2 Sobic.002G176400 ubiquitin domain-containing protein 2, putative, expressed -
3 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
4 Sobic.001G285300 expressed protein -
5 Sobic.006G094600 LSM domain containing protein, expressed K12620: U6 snRNA-associated Sm-like protein LSm1
6 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
7 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
8 Sobic.003G420700 expressed protein -
9 Sobic.009G086200 ubiquitin-conjugating enzyme E2 O, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
10 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
11 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
12 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
14 Sobic.008G108500 histone deacetylase 6, putative, expressed -
15 Sobic.004G122000 protein of unknown function DUF502 domain containing protein, expressed -
16 Sobic.001G189600 F-box domain containing protein, expressed -
17 Sobic.006G143500 expressed protein -
18 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
19 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein


Gene co-expression network
sample Sobic001G036700 Sobic001G036700 Sobic001G532100 Sobic001G532100 Sobic001G036700--Sobic001G532100 Sobic002G176400 Sobic002G176400 Sobic001G036700--Sobic002G176400 Sobic007G192100 Sobic007G192100 Sobic001G036700--Sobic007G192100 Sobic001G285300 Sobic001G285300 Sobic001G036700--Sobic001G285300 Sobic006G094600 Sobic006G094600 Sobic001G036700--Sobic006G094600 Sobic001G126200 Sobic001G126200 Sobic001G036700--Sobic001G126200 Sobic003G131300 Sobic003G131300 Sobic001G036700--Sobic003G131300 Sobic003G420700 Sobic003G420700 Sobic001G036700--Sobic003G420700 Sobic009G086200 Sobic009G086200 Sobic001G036700--Sobic009G086200 Sobic008G137600 Sobic008G137600 Sobic001G532100--Sobic008G137600 Sobic001G532100--Sobic001G036700 Sobic010G193800 Sobic010G193800 Sobic001G532100--Sobic010G193800 Sobic001G532100--Sobic001G285300 Sobic001G294900 Sobic001G294900 Sobic001G532100--Sobic001G294900 Sobic007G152400 Sobic007G152400 Sobic001G532100--Sobic007G152400 Sobic006G225300 Sobic006G225300 Sobic001G532100--Sobic006G225300 Sobic003G043400 Sobic003G043400 Sobic001G532100--Sobic003G043400 Sobic003G273400 Sobic003G273400 Sobic001G532100--Sobic003G273400 Sobic002G176400--Sobic001G036700 Sobic008G108500 Sobic008G108500 Sobic002G176400--Sobic008G108500 Sobic004G122000 Sobic004G122000 Sobic002G176400--Sobic004G122000 Sobic002G176400--Sobic007G192100 Sobic003G189900 Sobic003G189900 Sobic002G176400--Sobic003G189900 Sobic002G176400--Sobic009G086200 Sobic002G176400--Sobic001G126200 Sobic009G034400 Sobic009G034400 Sobic002G176400--Sobic009G034400 Sobic007G038800 Sobic007G038800 Sobic002G176400--Sobic007G038800 Sobic007G192100--Sobic008G108500 Sobic007G192100--Sobic001G036700 Sobic001G402600 Sobic001G402600 Sobic007G192100--Sobic001G402600 Sobic007G192100--Sobic002G176400 Sobic007G192100--Sobic001G126200 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic002G399500 Sobic002G399500 Sobic007G192100--Sobic002G399500 Sobic007G117800 Sobic007G117800 Sobic007G192100--Sobic007G117800 Sobic008G111700 Sobic008G111700 Sobic001G285300--Sobic008G111700 Sobic001G285300--Sobic001G532100 Sobic006G143500 Sobic006G143500 Sobic001G285300--Sobic006G143500 Sobic002G044000 Sobic002G044000 Sobic001G285300--Sobic002G044000 Sobic001G285300--Sobic001G036700 Sobic001G285300--Sobic001G126200 Sobic001G285300--Sobic003G420700 Sobic001G402300 Sobic001G402300 Sobic001G285300--Sobic001G402300 Sobic001G285300--Sobic006G094600 Sobic006G094600--Sobic008G137600 Sobic006G011000 Sobic006G011000 Sobic006G094600--Sobic006G011000 Sobic006G094600--Sobic003G131300 Sobic006G094600--Sobic001G294900 Sobic006G094600--Sobic001G126200 Sobic006G183000 Sobic006G183000 Sobic006G094600--Sobic006G183000 Sobic006G094600--Sobic001G285300 Sobic002G428200 Sobic002G428200 Sobic006G094600--Sobic002G428200 Sobic010G205300 Sobic010G205300 Sobic006G094600--Sobic010G205300 Sobic006G222400 Sobic006G222400 Sobic001G126200--Sobic006G222400 Sobic004G224800 Sobic004G224800 Sobic001G126200--Sobic004G224800 Sobic001G126200--Sobic006G094600 Sobic001G126200--Sobic003G131300 Sobic001G126200--Sobic001G285300 Sobic010G238700 Sobic010G238700 Sobic001G126200--Sobic010G238700 Sobic001G367000 Sobic001G367000 Sobic001G126200--Sobic001G367000 Sobic001G126200--Sobic002G044000 Sobic001G126200--Sobic007G192100 Sobic004G164000 Sobic004G164000 Sobic003G131300--Sobic004G164000 Sobic010G197900 Sobic010G197900 Sobic003G131300--Sobic010G197900 Sobic003G131300--Sobic006G094600 Sobic003G131300--Sobic001G126200 Sobic001G035400 Sobic001G035400 Sobic003G131300--Sobic001G035400 Sobic004G344800 Sobic004G344800 Sobic003G131300--Sobic004G344800 Sobic003G131300--Sobic001G036700 Sobic009G001900 Sobic009G001900 Sobic003G131300--Sobic009G001900 Sobic007G019501 Sobic007G019501 Sobic003G131300--Sobic007G019501 Sobic003G420700--Sobic010G193800 Sobic001G038100 Sobic001G038100 Sobic003G420700--Sobic001G038100 Sobic002G077900 Sobic002G077900 Sobic003G420700--Sobic002G077900 Sobic001G309100 Sobic001G309100 Sobic003G420700--Sobic001G309100 Sobic003G420700--Sobic001G285300 Sobic007G117100 Sobic007G117100 Sobic003G420700--Sobic007G117100 Sobic002G014700 Sobic002G014700 Sobic003G420700--Sobic002G014700 Sobic009G036900 Sobic009G036900 Sobic003G420700--Sobic009G036900 Sobic003G024800 Sobic003G024800 Sobic003G420700--Sobic003G024800 Sobic009G086200--Sobic002G176400 Sobic009G086200--Sobic001G036700 Sobic009G086200--Sobic001G285300 Sobic009G086200--Sobic001G532100 Sobic009G086200--Sobic003G043400 Sobic009G086200--Sobic007G192100 Sobic004G048700 Sobic004G048700 Sobic009G086200--Sobic004G048700 Sobic009G086200--Sobic007G038800 Sobic009G086200--Sobic008G108500
Octagon: transcription factors


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