Gene annotation
Transcriptome id Sobic.003G420700.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q840
Pfam -
Panther DB PTHR33912 PTHR33912:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13470 : -
RAP-DB (Rice) LOC_Os01g71262.1 : expressed protein
MaizeGDB (Corn) Zm00025a001232 , Zm00025a026086
Brachypodium -
Barley HORVU3Hr1G104260.4 , HORVU3Hr1G104260.2 , HORVU3Hr1G104260.3 , HORVU3Hr1G104260.1
Wheat TraesCS3D02G471700 , TraesCS3A02G477100 , TraesCS3B02G519900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
3 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
4 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
5 Sobic.001G285300 expressed protein -
6 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
7 Sobic.002G014700 OsFBX209 - F-box domain containing protein, expressed -
8 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
9 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
10 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
11 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
12 Sobic.001G036700 OsFBX442 - F-box domain containing protein, expressed -
13 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
14 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
15 Sobic.003G132700 OsFBX237 - F-box domain containing protein, expressed -
16 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
17 Sobic.001G350501 - K11253: histone H3
18 Sobic.007G205000 zinc finger family protein, putative, expressed -
19 Sobic.003G101300 expressed protein -
20 Sobic.002G329300 basic helix-loop-helix DND-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic003G420700 Sobic003G420700 Sobic010G193800 Sobic010G193800 Sobic003G420700--Sobic010G193800 Sobic001G038100 Sobic001G038100 Sobic003G420700--Sobic001G038100 Sobic002G077900 Sobic002G077900 Sobic003G420700--Sobic002G077900 Sobic001G309100 Sobic001G309100 Sobic003G420700--Sobic001G309100 Sobic001G285300 Sobic001G285300 Sobic003G420700--Sobic001G285300 Sobic007G117100 Sobic007G117100 Sobic003G420700--Sobic007G117100 Sobic002G014700 Sobic002G014700 Sobic003G420700--Sobic002G014700 Sobic009G036900 Sobic009G036900 Sobic003G420700--Sobic009G036900 Sobic003G024800 Sobic003G024800 Sobic003G420700--Sobic003G024800 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic002G256300 Sobic002G256300 Sobic010G193800--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic010G193800--Sobic001G532100 Sobic006G225300 Sobic006G225300 Sobic010G193800--Sobic006G225300 Sobic007G203700 Sobic007G203700 Sobic010G193800--Sobic007G203700 Sobic001G439600 Sobic001G439600 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic009G246950 Sobic009G246950 Sobic010G193800--Sobic009G246950 Sobic002G204000 Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G038100--Sobic001G309100 Sobic001G507400 Sobic001G507400 Sobic001G038100--Sobic001G507400 Sobic006G120800 Sobic006G120800 Sobic001G038100--Sobic006G120800 Sobic001G038100--Sobic007G117100 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic001G168900 Sobic001G168900 Sobic002G077900--Sobic001G168900 Sobic001G226000 Sobic001G226000 Sobic002G077900--Sobic001G226000 Sobic001G370300 Sobic001G370300 Sobic002G077900--Sobic001G370300 Sobic002G077900--Sobic003G420700 Sobic004G307500 Sobic004G307500 Sobic002G077900--Sobic004G307500 Sobic009G058500 Sobic009G058500 Sobic002G077900--Sobic009G058500 Sobic009G258400 Sobic009G258400 Sobic002G077900--Sobic009G258400 Sobic006G044600 Sobic006G044600 Sobic002G077900--Sobic006G044600 Sobic002G077900--Sobic010G193800 Sobic001G309100--Sobic001G038100 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic001G309100--Sobic007G117100 Sobic008G111700 Sobic008G111700 Sobic001G285300--Sobic008G111700 Sobic001G285300--Sobic001G532100 Sobic006G143500 Sobic006G143500 Sobic001G285300--Sobic006G143500 Sobic002G044000 Sobic002G044000 Sobic001G285300--Sobic002G044000 Sobic001G036700 Sobic001G036700 Sobic001G285300--Sobic001G036700 Sobic001G126200 Sobic001G126200 Sobic001G285300--Sobic001G126200 Sobic001G285300--Sobic003G420700 Sobic001G402300 Sobic001G402300 Sobic001G285300--Sobic001G402300 Sobic006G094600 Sobic006G094600 Sobic001G285300--Sobic006G094600 Sobic007G117100--Sobic001G038100 Sobic003G433500 Sobic003G433500 Sobic007G117100--Sobic003G433500 Sobic003G132700 Sobic003G132700 Sobic007G117100--Sobic003G132700 Sobic007G117100--Sobic006G120800 Sobic007G117100--Sobic001G507400 Sobic007G117100--Sobic001G309100 Sobic003G354100 Sobic003G354100 Sobic007G117100--Sobic003G354100 Sobic007G117100--Sobic002G014700 Sobic002G089900 Sobic002G089900 Sobic007G117100--Sobic002G089900 Sobic002G014700--Sobic003G132700 Sobic002G014700--Sobic007G117100 Sobic002G014700--Sobic003G420700 Sobic002G014700--Sobic001G507400 Sobic002G014700--Sobic001G038100 Sobic009G192500 Sobic009G192500 Sobic002G014700--Sobic009G192500 Sobic009G034400 Sobic009G034400 Sobic002G014700--Sobic009G034400 Sobic003G140900 Sobic003G140900 Sobic002G014700--Sobic003G140900 Sobic002G014700--Sobic001G309100 Sobic002G068300 Sobic002G068300 Sobic009G036900--Sobic002G068300 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic009G036900--Sobic003G024800 Sobic010G228600 Sobic010G228600 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500 Sobic003G024800--Sobic009G036900 Sobic004G349100 Sobic004G349100 Sobic003G024800--Sobic004G349100 Sobic003G024800--Sobic001G309100 Sobic003G024800--Sobic009G034400 Sobic003G024800--Sobic001G350501 Sobic007G063200 Sobic007G063200 Sobic003G024800--Sobic007G063200 Sobic003G024800--Sobic010G071200 Sobic008G142700 Sobic008G142700 Sobic003G024800--Sobic008G142700 Sobic003G024800--Sobic010G228600
Octagon: transcription factors


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