Gene annotation
Transcriptome id Sobic.006G261100.1
Synonym Sb06g032400
Functional annotation UBX domain-containing protein, putative, expressed
UniProt C5YA43
Pfam PF00789 PF14555 PF13899
Panther DB PTHR23322 PTHR23322:SF6
NCBI CDD KOG1364; Predicted ubiquitin regulatory protein, contains UAS and UBX domains
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G14570 : UBX domain-containing protein
RAP-DB (Rice) LOC_Os04g57520.1 : UBX domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009368 , Zm00025a057347
Brachypodium KQJ85219
Barley HORVU2Hr1G120970.8 , HORVU2Hr1G120970.1 , HORVU2Hr1G120970.3 , HORVU2Hr1G120970.2 , HORVU2Hr1G120970.5 , HORVU2Hr1G120970.4 , HORVU2Hr1G120970.7 , HORVU2Hr1G120970.6
Wheat TraesCS2B02G579800 , TraesCS2B02G579800 , TraesCS2A02G549200 , TraesCS2A02G549200 , TraesCS2D02G550000
Populus -


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cDNA sequences
Sobic.006G261100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
2 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
3 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
4 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
5 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
6 Sobic.006G120800 transglutaminase, putative, expressed -
7 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
8 Sobic.009G216000 mov34 family protein, putative, expressed K11864: BRCC3, BRCA1/BRCA2-containing complex subunit 3
9 Sobic.003G354100 expressed protein -
10 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
11 Sobic.008G073000 expressed protein -
12 Sobic.003G420700 expressed protein -
13 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
14 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.003G189900 expressed protein -
16 Sobic.001G079100 upstream activation factor subunit spp27, putative, expressed K15223: UAF30, upstream activation factor subunit UAF30
17 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
18 Sobic.002G362300 prefoldin, putative, expressed -
19 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
20 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10


Gene co-expression network
sample Sobic006G261100 Sobic006G261100 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic010G095700 Sobic010G095700 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic009G216000 Sobic009G216000 Sobic006G261100--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic006G261100--Sobic003G354100 Sobic002G204000 Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G309100 Sobic001G309100 Sobic001G038100--Sobic001G309100 Sobic001G507400 Sobic001G507400 Sobic001G038100--Sobic001G507400 Sobic001G038100--Sobic006G120800 Sobic001G038100--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic007G056500 Sobic007G056500 Sobic010G095700--Sobic007G056500 Sobic001G473600 Sobic001G473600 Sobic010G095700--Sobic001G473600 Sobic010G095700--Sobic006G261100 Sobic010G095700--Sobic001G390500 Sobic002G034600 Sobic002G034600 Sobic010G095700--Sobic002G034600 Sobic001G497900 Sobic001G497900 Sobic010G095700--Sobic001G497900 Sobic007G111100 Sobic007G111100 Sobic010G095700--Sobic007G111100 Sobic003G355000 Sobic003G355000 Sobic010G095700--Sobic003G355000 Sobic001G469800 Sobic001G469800 Sobic010G095700--Sobic001G469800 Sobic002G276900--Sobic006G261100 Sobic006G099800 Sobic006G099800 Sobic002G276900--Sobic006G099800 Sobic009G100300 Sobic009G100300 Sobic002G276900--Sobic009G100300 Sobic003G416600 Sobic003G416600 Sobic002G276900--Sobic003G416600 Sobic002G121000 Sobic002G121000 Sobic002G276900--Sobic002G121000 Sobic009G034400 Sobic009G034400 Sobic002G276900--Sobic009G034400 Sobic001G512900 Sobic001G512900 Sobic002G276900--Sobic001G512900 Sobic010G253100 Sobic010G253100 Sobic002G276900--Sobic010G253100 Sobic002G179500 Sobic002G179500 Sobic002G276900--Sobic002G179500 Sobic007G117100--Sobic001G038100 Sobic003G433500 Sobic003G433500 Sobic007G117100--Sobic003G433500 Sobic003G132700 Sobic003G132700 Sobic007G117100--Sobic003G132700 Sobic007G117100--Sobic006G120800 Sobic007G117100--Sobic001G507400 Sobic007G117100--Sobic001G309100 Sobic007G117100--Sobic003G354100 Sobic002G014700 Sobic002G014700 Sobic007G117100--Sobic002G014700 Sobic002G089900 Sobic002G089900 Sobic007G117100--Sobic002G089900 Sobic002G095700 Sobic002G095700 Sobic009G022100--Sobic002G095700 Sobic009G022100--Sobic003G433500 Sobic005G030300 Sobic005G030300 Sobic009G022100--Sobic005G030300 Sobic009G192500 Sobic009G192500 Sobic009G022100--Sobic009G192500 Sobic008G073000 Sobic008G073000 Sobic009G022100--Sobic008G073000 Sobic009G022100--Sobic006G261100 Sobic009G022100--Sobic001G469800 Sobic002G362300 Sobic002G362300 Sobic009G022100--Sobic002G362300 Sobic001G371000 Sobic001G371000 Sobic009G022100--Sobic001G371000 Sobic006G120800--Sobic001G038100 Sobic006G120800--Sobic007G117100 Sobic009G258400 Sobic009G258400 Sobic006G120800--Sobic009G258400 Sobic006G120800--Sobic001G507400 Sobic007G050300 Sobic007G050300 Sobic006G120800--Sobic007G050300 Sobic006G120800--Sobic006G261100 Sobic010G154000 Sobic010G154000 Sobic006G120800--Sobic010G154000 Sobic006G120800--Sobic010G253100 Sobic001G335500 Sobic001G335500 Sobic006G120800--Sobic001G335500 Sobic001G083600 Sobic001G083600 Sobic001G390500--Sobic001G083600 Sobic003G248500 Sobic003G248500 Sobic001G390500--Sobic003G248500 Sobic010G055500 Sobic010G055500 Sobic001G390500--Sobic010G055500 Sobic001G390500--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic001G390500--Sobic004G263900 Sobic003G189900 Sobic003G189900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic010G071200 Sobic010G071200 Sobic001G390500--Sobic010G071200 Sobic002G084300 Sobic002G084300 Sobic001G390500--Sobic002G084300 Sobic009G216000--Sobic003G433500 Sobic009G216000--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic009G216000--Sobic002G045400 Sobic009G216000--Sobic005G030300 Sobic009G216000--Sobic001G371000 Sobic004G013600 Sobic004G013600 Sobic009G216000--Sobic004G013600 Sobic009G198100 Sobic009G198100 Sobic009G216000--Sobic009G198100 Sobic009G216000--Sobic002G362300 Sobic009G216000--Sobic006G261100 Sobic003G354100--Sobic003G433500 Sobic003G354100--Sobic004G013600 Sobic003G354100--Sobic003G132700 Sobic003G354100--Sobic007G117100 Sobic007G188900 Sobic007G188900 Sobic003G354100--Sobic007G188900 Sobic007G139400 Sobic007G139400 Sobic003G354100--Sobic007G139400 Sobic006G092800 Sobic006G092800 Sobic003G354100--Sobic006G092800 Sobic006G248500 Sobic006G248500 Sobic003G354100--Sobic006G248500 Sobic009G129600 Sobic009G129600 Sobic003G354100--Sobic009G129600
Octagon: transcription factors


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