Gene annotation
Transcriptome id Sobic.010G095700.1
Synonym Sb10g008350
Functional annotation DCN1-like protein 2, putative, expressed
UniProt C5Z7F3
Pfam PF14555 PF03556
Panther DB PTHR12281
NCBI CDD KOG3077; Uncharacterized conserved protein
KEGG Orthology K17822; DCN1-like protein 1/2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12760 : -
RAP-DB (Rice) LOC_Os06g12690.1 : DCN1-like protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a033215 , Zm00025a042620
Brachypodium KQJ86729 , KQJ86730 , PNT62751
Barley HORVU5Hr1G030970.1 , HORVU5Hr1G030970.2 , HORVU5Hr1G030970.3 , HORVU5Hr1G030970.4 , HORVU5Hr1G030970.5 , HORVU5Hr1G030970.6 , HORVU5Hr1G030970.7
Wheat TraesCS5A02G109900 , TraesCS5D02G117800 , TraesCS5D02G117800 , TraesCS5B02G115600 , TraesCS5B02G115600
Populus -


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cDNA sequences
Sobic.010G095700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
2 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
3 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
4 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
5 Sobic.002G034600 zinc ion binding protein, putative, expressed -
6 Sobic.001G497900 XS domain containing protein, expressed -
7 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
8 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
9 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
10 Sobic.007G041300 expressed protein -
11 Sobic.009G198100 expressed protein -
12 Sobic.007G046200 ELF7, putative, expressed K15174: RNA polymerase II-associated factor 1
13 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
14 Sobic.009G137700 hydrolase, NUDIX family, domain containing protein, expressed K01823: idi, isopentenyl-diphosphate Delta-isomerase
15 Sobic.004G068500 CUE domain containing protein, expressed -
16 Sobic.001G376800 - K13116: DDX41, ATP-dependent RNA helicase DDX41
17 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
18 Sobic.003G146900 lipase class 3 family protein, putative, expressed -
19 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
20 Sobic.010G029900 leucine carboxyl methyltransferase 1, putative, expressed K15451: PPM2, LCMT2, tRNA wybutosine-synthesizing protein 4


Gene co-expression network
sample Sobic010G095700 Sobic010G095700 Sobic007G056500 Sobic007G056500 Sobic010G095700--Sobic007G056500 Sobic001G473600 Sobic001G473600 Sobic010G095700--Sobic001G473600 Sobic006G261100 Sobic006G261100 Sobic010G095700--Sobic006G261100 Sobic001G390500 Sobic001G390500 Sobic010G095700--Sobic001G390500 Sobic002G034600 Sobic002G034600 Sobic010G095700--Sobic002G034600 Sobic001G497900 Sobic001G497900 Sobic010G095700--Sobic001G497900 Sobic007G111100 Sobic007G111100 Sobic010G095700--Sobic007G111100 Sobic003G355000 Sobic003G355000 Sobic010G095700--Sobic003G355000 Sobic001G469800 Sobic001G469800 Sobic010G095700--Sobic001G469800 Sobic006G186400 Sobic006G186400 Sobic007G056500--Sobic006G186400 Sobic007G056500--Sobic002G034600 Sobic001G042200 Sobic001G042200 Sobic007G056500--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic007G056500--Sobic010G077500 Sobic007G056500--Sobic010G095700 Sobic004G180900 Sobic004G180900 Sobic007G056500--Sobic004G180900 Sobic001G395100 Sobic001G395100 Sobic007G056500--Sobic001G395100 Sobic001G066300 Sobic001G066300 Sobic007G056500--Sobic001G066300 Sobic006G121300 Sobic006G121300 Sobic007G056500--Sobic006G121300 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic006G261100--Sobic001G390500 Sobic009G216000 Sobic009G216000 Sobic006G261100--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic006G261100--Sobic003G354100 Sobic001G083600 Sobic001G083600 Sobic001G390500--Sobic001G083600 Sobic003G248500 Sobic003G248500 Sobic001G390500--Sobic003G248500 Sobic010G055500 Sobic010G055500 Sobic001G390500--Sobic010G055500 Sobic001G390500--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic001G390500--Sobic004G263900 Sobic003G189900 Sobic003G189900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic010G071200 Sobic010G071200 Sobic001G390500--Sobic010G071200 Sobic002G084300 Sobic002G084300 Sobic001G390500--Sobic002G084300 Sobic009G198100 Sobic009G198100 Sobic002G034600--Sobic009G198100 Sobic007G119200 Sobic007G119200 Sobic002G034600--Sobic007G119200 Sobic003G081000 Sobic003G081000 Sobic002G034600--Sobic003G081000 Sobic002G034600--Sobic001G473600 Sobic002G034600--Sobic003G355000 Sobic007G118200 Sobic007G118200 Sobic002G034600--Sobic007G118200 Sobic002G264200 Sobic002G264200 Sobic002G034600--Sobic002G264200 Sobic001G356600 Sobic001G356600 Sobic002G034600--Sobic001G356600 Sobic010G236400 Sobic010G236400 Sobic002G034600--Sobic010G236400 Sobic001G497900--Sobic002G034600 Sobic001G497900--Sobic003G355000 Sobic001G497900--Sobic009G198100 Sobic001G497900--Sobic001G473600 Sobic001G497900--Sobic006G121300 Sobic007G091600 Sobic007G091600 Sobic001G497900--Sobic007G091600 Sobic001G497900--Sobic001G356600 Sobic001G497900--Sobic010G095700 Sobic001G497900--Sobic001G395100 Sobic010G202600 Sobic010G202600 Sobic007G111100--Sobic010G202600 Sobic002G262700 Sobic002G262700 Sobic007G111100--Sobic002G262700 Sobic006G267300 Sobic006G267300 Sobic007G111100--Sobic006G267300 Sobic001G143500 Sobic001G143500 Sobic007G111100--Sobic001G143500 Sobic007G111100--Sobic001G390500 Sobic004G283000 Sobic004G283000 Sobic007G111100--Sobic004G283000 Sobic004G068500 Sobic004G068500 Sobic007G111100--Sobic004G068500 Sobic001G131800 Sobic001G131800 Sobic007G111100--Sobic001G131800 Sobic003G205501 Sobic003G205501 Sobic007G111100--Sobic003G205501 Sobic003G355000--Sobic009G198100 Sobic003G355000--Sobic002G034600 Sobic002G045400 Sobic002G045400 Sobic003G355000--Sobic002G045400 Sobic003G433500 Sobic003G433500 Sobic003G355000--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic003G355000--Sobic008G174300 Sobic001G517500 Sobic001G517500 Sobic003G355000--Sobic001G517500 Sobic003G355000--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic003G355000--Sobic010G033400 Sobic003G355000--Sobic001G497900 Sobic001G469800--Sobic010G202600 Sobic006G248500 Sobic006G248500 Sobic001G469800--Sobic006G248500 Sobic002G259800 Sobic002G259800 Sobic001G469800--Sobic002G259800 Sobic001G469800--Sobic001G395100 Sobic001G469800--Sobic003G433500 Sobic008G129700 Sobic008G129700 Sobic001G469800--Sobic008G129700 Sobic001G469800--Sobic007G111100 Sobic001G469800--Sobic006G267300 Sobic008G127400 Sobic008G127400 Sobic001G469800--Sobic008G127400
Octagon: transcription factors


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