Gene annotation
Transcriptome id Sobic.003G146900.1
Synonym Sb03g012710
Functional annotation lipase class 3 family protein, putative, expressed
UniProt C5XIS0
Pfam PF03893 PF01764
Panther DB PTHR21493 PTHR21493:SF2
NCBI CDD KOG2088; Predicted lipase/calmodulin-binding heat-shock protein
KEGG Orthology -
Gene Ontology GO:0016042; lipid catabolic process GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G16070 : Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3
RAP-DB (Rice) LOC_Os01g20840.1 : lipase class 3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a036050
Brachypodium KQK04120 , KQK04122 , KQK04121 , KQK04119
Barley HORVU3Hr1G041640.10 , HORVU3Hr1G041640.8 , HORVU3Hr1G041640.9 , HORVU3Hr1G041640.4 , HORVU3Hr1G041640.5 , HORVU3Hr1G041640.6 , HORVU3Hr1G041640.7 , HORVU3Hr1G041640.1 , HORVU3Hr1G041640.2 , HORVU3Hr1G041640.3
Wheat TraesCS3D02G197800 , TraesCS3D02G197800 , TraesCS3D02G197800 , TraesCS3A02G194800 , TraesCS3A02G194800 , TraesCS3A02G194800 , TraesCS6D02G320400 , TraesCS3B02G228800 , TraesCS3B02G228800 , TraesCS3B02G228800
Populus -


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cDNA sequences
Sobic.003G146900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G067700 expressed protein -
2 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
3 Sobic.009G216000 mov34 family protein, putative, expressed K11864: BRCC3, BRCA1/BRCA2-containing complex subunit 3
4 Sobic.002G314900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G349800 expressed protein -
6 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
7 Sobic.008G128600 miro, putative, expressed K07953: GTP-binding protein SAR1
8 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
9 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
10 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
12 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
13 Sobic.009G198100 expressed protein -
14 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
15 Sobic.002G382600 expressed protein -
16 Sobic.003G005200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
17 Sobic.010G058900 BSD domain containing protein, expressed -
18 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
19 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G091200 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2


Gene co-expression network
sample Sobic003G146900 Sobic003G146900 Sobic010G067700 Sobic010G067700 Sobic003G146900--Sobic010G067700 Sobic003G355000 Sobic003G355000 Sobic003G146900--Sobic003G355000 Sobic009G216000 Sobic009G216000 Sobic003G146900--Sobic009G216000 Sobic002G314900 Sobic002G314900 Sobic003G146900--Sobic002G314900 Sobic004G349800 Sobic004G349800 Sobic003G146900--Sobic004G349800 Sobic010G095700 Sobic010G095700 Sobic003G146900--Sobic010G095700 Sobic008G128600 Sobic008G128600 Sobic003G146900--Sobic008G128600 Sobic006G261100 Sobic006G261100 Sobic003G146900--Sobic006G261100 Sobic001G473600 Sobic001G473600 Sobic003G146900--Sobic001G473600 Sobic010G067700--Sobic008G128600 Sobic009G054700 Sobic009G054700 Sobic010G067700--Sobic009G054700 Sobic001G136900 Sobic001G136900 Sobic010G067700--Sobic001G136900 Sobic010G071200 Sobic010G071200 Sobic010G067700--Sobic010G071200 Sobic002G256300 Sobic002G256300 Sobic010G067700--Sobic002G256300 Sobic001G512900 Sobic001G512900 Sobic010G067700--Sobic001G512900 Sobic010G168600 Sobic010G168600 Sobic010G067700--Sobic010G168600 Sobic001G083600 Sobic001G083600 Sobic010G067700--Sobic001G083600 Sobic010G067700--Sobic003G146900 Sobic009G198100 Sobic009G198100 Sobic003G355000--Sobic009G198100 Sobic002G034600 Sobic002G034600 Sobic003G355000--Sobic002G034600 Sobic002G045400 Sobic002G045400 Sobic003G355000--Sobic002G045400 Sobic003G433500 Sobic003G433500 Sobic003G355000--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic003G355000--Sobic008G174300 Sobic001G517500 Sobic001G517500 Sobic003G355000--Sobic001G517500 Sobic007G118200 Sobic007G118200 Sobic003G355000--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic003G355000--Sobic010G033400 Sobic001G497900 Sobic001G497900 Sobic003G355000--Sobic001G497900 Sobic009G216000--Sobic003G433500 Sobic009G216000--Sobic003G355000 Sobic009G216000--Sobic002G045400 Sobic005G030300 Sobic005G030300 Sobic009G216000--Sobic005G030300 Sobic001G371000 Sobic001G371000 Sobic009G216000--Sobic001G371000 Sobic004G013600 Sobic004G013600 Sobic009G216000--Sobic004G013600 Sobic009G216000--Sobic009G198100 Sobic002G362300 Sobic002G362300 Sobic009G216000--Sobic002G362300 Sobic009G216000--Sobic006G261100 Sobic007G028100 Sobic007G028100 Sobic002G314900--Sobic007G028100 Sobic001G279100 Sobic001G279100 Sobic002G314900--Sobic001G279100 Sobic001G005600 Sobic001G005600 Sobic002G314900--Sobic001G005600 Sobic002G314900--Sobic003G146900 Sobic006G115466 Sobic006G115466 Sobic002G314900--Sobic006G115466 Sobic004G091200 Sobic004G091200 Sobic002G314900--Sobic004G091200 Sobic010G129600 Sobic010G129600 Sobic002G314900--Sobic010G129600 Sobic001G135500 Sobic001G135500 Sobic002G314900--Sobic001G135500 Sobic002G314900--Sobic001G517500 Sobic004G320000 Sobic004G320000 Sobic004G349800--Sobic004G320000 Sobic004G203100 Sobic004G203100 Sobic004G349800--Sobic004G203100 Sobic004G349800--Sobic003G146900 Sobic004G349800--Sobic010G168600 Sobic001G124300 Sobic001G124300 Sobic004G349800--Sobic001G124300 Sobic004G349800--Sobic002G256300 Sobic009G171700 Sobic009G171700 Sobic004G349800--Sobic009G171700 Sobic004G349800--Sobic001G512900 Sobic002G352700 Sobic002G352700 Sobic004G349800--Sobic002G352700 Sobic007G056500 Sobic007G056500 Sobic010G095700--Sobic007G056500 Sobic010G095700--Sobic001G473600 Sobic010G095700--Sobic006G261100 Sobic001G390500 Sobic001G390500 Sobic010G095700--Sobic001G390500 Sobic010G095700--Sobic002G034600 Sobic010G095700--Sobic001G497900 Sobic007G111100 Sobic007G111100 Sobic010G095700--Sobic007G111100 Sobic010G095700--Sobic003G355000 Sobic001G469800 Sobic001G469800 Sobic010G095700--Sobic001G469800 Sobic008G128600--Sobic010G067700 Sobic008G128600--Sobic009G054700 Sobic008G128600--Sobic001G512900 Sobic003G250500 Sobic003G250500 Sobic008G128600--Sobic003G250500 Sobic001G131800 Sobic001G131800 Sobic008G128600--Sobic001G131800 Sobic009G178600 Sobic009G178600 Sobic008G128600--Sobic009G178600 Sobic008G128600--Sobic001G083600 Sobic008G128600--Sobic009G198100 Sobic006G252300 Sobic006G252300 Sobic008G128600--Sobic006G252300 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic006G261100--Sobic001G390500 Sobic006G261100--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic006G261100--Sobic003G354100 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900
Octagon: transcription factors


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