Gene annotation
Transcriptome id Sobic.007G117100.1
Synonym NF-YB12, Nuclear Factor Y, Sb07g019330, SbNF-YB11
Functional annotation tentative name (PubMedID : 31536532)
histone-like transcription factor and archaeal histone, putative, expressed
UniProt C5YKK9
Pfam PF00808
Panther DB PTHR11064:SF8 PTHR11064
NCBI CDD KOG0871; Class 2 transcription repressor NC2, beta subunit (Dr1)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23090 : nuclear factor Y, subunit B13
RAP-DB (Rice) LOC_Os08g29500.1 : histone-like transcription factor and archaeal histone, putative, expressed
MaizeGDB (Corn) Zm00025a006107 , Zm00025a030959
Brachypodium KQJ98106
Barley HORVU3Hr1G097680.3 , HORVU3Hr1G097680.2 , HORVU3Hr1G097680.1 , HORVU3Hr1G097680.4
Wheat TraesCS3B02G487800 , TraesCS3A02G450700 , TraesCS3D02G443500
Populus PNT00515 , PNT00516


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cDNA sequences
Sobic.007G117100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
2 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
3 Sobic.003G132700 OsFBX237 - F-box domain containing protein, expressed -
4 Sobic.006G120800 transglutaminase, putative, expressed -
5 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
6 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
7 Sobic.003G354100 expressed protein -
8 Sobic.002G014700 OsFBX209 - F-box domain containing protein, expressed -
9 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
10 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
11 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
12 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
13 Sobic.003G420700 expressed protein -
14 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
16 Sobic.006G248500 expressed protein -
17 Sobic.009G216000 mov34 family protein, putative, expressed K11864: BRCC3, BRCA1/BRCA2-containing complex subunit 3
18 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
19 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
20 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1


Gene co-expression network
sample Sobic007G117100 Sobic007G117100 Sobic001G038100 Sobic001G038100 Sobic007G117100--Sobic001G038100 Sobic003G433500 Sobic003G433500 Sobic007G117100--Sobic003G433500 Sobic003G132700 Sobic003G132700 Sobic007G117100--Sobic003G132700 Sobic006G120800 Sobic006G120800 Sobic007G117100--Sobic006G120800 Sobic001G507400 Sobic001G507400 Sobic007G117100--Sobic001G507400 Sobic001G309100 Sobic001G309100 Sobic007G117100--Sobic001G309100 Sobic003G354100 Sobic003G354100 Sobic007G117100--Sobic003G354100 Sobic002G014700 Sobic002G014700 Sobic007G117100--Sobic002G014700 Sobic002G089900 Sobic002G089900 Sobic007G117100--Sobic002G089900 Sobic002G204000 Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G038100--Sobic001G309100 Sobic001G038100--Sobic001G507400 Sobic001G038100--Sobic006G120800 Sobic001G038100--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic006G248500 Sobic006G248500 Sobic003G433500--Sobic006G248500 Sobic002G362300 Sobic002G362300 Sobic003G433500--Sobic002G362300 Sobic002G259800 Sobic002G259800 Sobic003G433500--Sobic002G259800 Sobic009G192500 Sobic009G192500 Sobic003G132700--Sobic009G192500 Sobic003G132700--Sobic003G354100 Sobic003G132700--Sobic007G117100 Sobic003G132700--Sobic002G089900 Sobic003G132700--Sobic002G014700 Sobic002G223300 Sobic002G223300 Sobic003G132700--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic003G132700--Sobic002G334600 Sobic003G132700--Sobic003G433500 Sobic003G132700--Sobic001G507400 Sobic006G120800--Sobic001G038100 Sobic006G120800--Sobic007G117100 Sobic009G258400 Sobic009G258400 Sobic006G120800--Sobic009G258400 Sobic006G120800--Sobic001G507400 Sobic007G050300 Sobic007G050300 Sobic006G120800--Sobic007G050300 Sobic006G120800--Sobic006G261100 Sobic010G154000 Sobic010G154000 Sobic006G120800--Sobic010G154000 Sobic010G253100 Sobic010G253100 Sobic006G120800--Sobic010G253100 Sobic001G335500 Sobic001G335500 Sobic006G120800--Sobic001G335500 Sobic001G507400--Sobic001G038100 Sobic001G507400--Sobic007G117100 Sobic007G191700 Sobic007G191700 Sobic001G507400--Sobic007G191700 Sobic001G507400--Sobic006G120800 Sobic001G507400--Sobic009G258400 Sobic001G507400--Sobic002G014700 Sobic001G507400--Sobic003G420700 Sobic001G507400--Sobic002G204000 Sobic001G507400--Sobic010G154000 Sobic001G309100--Sobic001G038100 Sobic003G024800 Sobic003G024800 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic001G309100--Sobic007G117100 Sobic003G354100--Sobic003G433500 Sobic004G013600 Sobic004G013600 Sobic003G354100--Sobic004G013600 Sobic003G354100--Sobic003G132700 Sobic003G354100--Sobic007G117100 Sobic007G188900 Sobic007G188900 Sobic003G354100--Sobic007G188900 Sobic007G139400 Sobic007G139400 Sobic003G354100--Sobic007G139400 Sobic006G092800 Sobic006G092800 Sobic003G354100--Sobic006G092800 Sobic003G354100--Sobic006G248500 Sobic009G129600 Sobic009G129600 Sobic003G354100--Sobic009G129600 Sobic002G014700--Sobic003G132700 Sobic002G014700--Sobic007G117100 Sobic002G014700--Sobic003G420700 Sobic002G014700--Sobic001G507400 Sobic002G014700--Sobic001G038100 Sobic002G014700--Sobic009G192500 Sobic009G034400 Sobic009G034400 Sobic002G014700--Sobic009G034400 Sobic003G140900 Sobic003G140900 Sobic002G014700--Sobic003G140900 Sobic002G014700--Sobic001G309100 Sobic004G078100 Sobic004G078100 Sobic002G089900--Sobic004G078100 Sobic009G044900 Sobic009G044900 Sobic002G089900--Sobic009G044900 Sobic002G089900--Sobic003G433500 Sobic002G089900--Sobic006G248500 Sobic002G089900--Sobic003G132700 Sobic002G095700 Sobic002G095700 Sobic002G089900--Sobic002G095700 Sobic002G089900--Sobic007G117100 Sobic002G089900--Sobic004G013600 Sobic002G089900--Sobic002G259800
Octagon: transcription factors


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