Gene annotation
Transcriptome id Sobic.002G014700.1
Synonym Sb02g001480
Functional annotation OsFBX209 - F-box domain containing protein, expressed
UniProt C5X7Z3
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02890.1 : OsFBX209 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ87316 , PNT66153 , PNT75200 , PNT75201 , KQK21075 , KQJ92941 , PNT76932 , PNT76931
Barley HORVU6Hr1G011580.3 , HORVU6Hr1G011580.2 , HORVU6Hr1G011580.1 , HORVU6Hr1G011580.5 , HORVU6Hr1G011580.4
Wheat TraesCS5D02G425700 , TraesCS7D02G483700 , TraesCS6A02G058900 , TraesCS5B02G294300 , TraesCS1B02G042400 , TraesCS6B02G103600 , TraesCSU02G026300 , TraesCSU02G026300 , TraesCSU02G026300 , TraesCS6D02G057300 , TraesCS6B02G083400 , TraesCS6D02G057500 , TraesCS6A02G047800 , TraesCS5B02G420000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G132700 OsFBX237 - F-box domain containing protein, expressed -
2 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
3 Sobic.003G420700 expressed protein -
4 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
5 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
6 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
7 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
8 Sobic.003G140900 OsFBL33 - F-box domain and LRR containing protein, expressed -
9 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
10 Sobic.002G362300 prefoldin, putative, expressed -
11 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
12 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
13 Sobic.001G127400 yippee zinc-binding protein, putative, expressed -
14 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
15 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
16 Sobic.001G370300 WD domain, G-beta repeat domain containing protein, expressed K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
17 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
18 Sobic.006G120800 transglutaminase, putative, expressed -
19 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
20 Sobic.001G285300 expressed protein -


Gene co-expression network
sample Sobic002G014700 Sobic002G014700 Sobic003G132700 Sobic003G132700 Sobic002G014700--Sobic003G132700 Sobic007G117100 Sobic007G117100 Sobic002G014700--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic002G014700--Sobic003G420700 Sobic001G507400 Sobic001G507400 Sobic002G014700--Sobic001G507400 Sobic001G038100 Sobic001G038100 Sobic002G014700--Sobic001G038100 Sobic009G192500 Sobic009G192500 Sobic002G014700--Sobic009G192500 Sobic009G034400 Sobic009G034400 Sobic002G014700--Sobic009G034400 Sobic003G140900 Sobic003G140900 Sobic002G014700--Sobic003G140900 Sobic001G309100 Sobic001G309100 Sobic002G014700--Sobic001G309100 Sobic003G132700--Sobic009G192500 Sobic003G354100 Sobic003G354100 Sobic003G132700--Sobic003G354100 Sobic003G132700--Sobic007G117100 Sobic002G089900 Sobic002G089900 Sobic003G132700--Sobic002G089900 Sobic003G132700--Sobic002G014700 Sobic002G223300 Sobic002G223300 Sobic003G132700--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic003G132700--Sobic002G334600 Sobic003G433500 Sobic003G433500 Sobic003G132700--Sobic003G433500 Sobic003G132700--Sobic001G507400 Sobic007G117100--Sobic001G038100 Sobic007G117100--Sobic003G433500 Sobic007G117100--Sobic003G132700 Sobic006G120800 Sobic006G120800 Sobic007G117100--Sobic006G120800 Sobic007G117100--Sobic001G507400 Sobic007G117100--Sobic001G309100 Sobic007G117100--Sobic003G354100 Sobic007G117100--Sobic002G014700 Sobic007G117100--Sobic002G089900 Sobic010G193800 Sobic010G193800 Sobic003G420700--Sobic010G193800 Sobic003G420700--Sobic001G038100 Sobic002G077900 Sobic002G077900 Sobic003G420700--Sobic002G077900 Sobic003G420700--Sobic001G309100 Sobic001G285300 Sobic001G285300 Sobic003G420700--Sobic001G285300 Sobic003G420700--Sobic007G117100 Sobic003G420700--Sobic002G014700 Sobic009G036900 Sobic009G036900 Sobic003G420700--Sobic009G036900 Sobic003G024800 Sobic003G024800 Sobic003G420700--Sobic003G024800 Sobic001G507400--Sobic001G038100 Sobic001G507400--Sobic007G117100 Sobic007G191700 Sobic007G191700 Sobic001G507400--Sobic007G191700 Sobic001G507400--Sobic006G120800 Sobic009G258400 Sobic009G258400 Sobic001G507400--Sobic009G258400 Sobic001G507400--Sobic002G014700 Sobic001G507400--Sobic003G420700 Sobic002G204000 Sobic002G204000 Sobic001G507400--Sobic002G204000 Sobic010G154000 Sobic010G154000 Sobic001G507400--Sobic010G154000 Sobic001G038100--Sobic002G204000 Sobic001G038100--Sobic001G309100 Sobic001G038100--Sobic001G507400 Sobic001G038100--Sobic006G120800 Sobic001G038100--Sobic007G117100 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic009G192500--Sobic003G132700 Sobic009G192500--Sobic007G117100 Sobic002G430900 Sobic002G430900 Sobic009G192500--Sobic002G430900 Sobic009G022100 Sobic009G022100 Sobic009G192500--Sobic009G022100 Sobic007G125700 Sobic007G125700 Sobic009G192500--Sobic007G125700 Sobic002G095700 Sobic002G095700 Sobic009G192500--Sobic002G095700 Sobic003G253400 Sobic003G253400 Sobic009G192500--Sobic003G253400 Sobic009G192500--Sobic002G223300 Sobic004G229100 Sobic004G229100 Sobic009G192500--Sobic004G229100 Sobic009G034400--Sobic009G036900 Sobic009G034400--Sobic003G024800 Sobic004G122000 Sobic004G122000 Sobic009G034400--Sobic004G122000 Sobic010G071200 Sobic010G071200 Sobic009G034400--Sobic010G071200 Sobic010G228600 Sobic010G228600 Sobic009G034400--Sobic010G228600 Sobic001G424500 Sobic001G424500 Sobic009G034400--Sobic001G424500 Sobic006G257900 Sobic006G257900 Sobic009G034400--Sobic006G257900 Sobic002G179500 Sobic002G179500 Sobic009G034400--Sobic002G179500 Sobic009G034400--Sobic001G309100 Sobic003G343600 Sobic003G343600 Sobic003G140900--Sobic003G343600 Sobic003G140900--Sobic002G223300 Sobic003G140900--Sobic002G014700 Sobic001G108900 Sobic001G108900 Sobic003G140900--Sobic001G108900 Sobic003G140900--Sobic002G089900 Sobic003G140900--Sobic007G117100 Sobic003G140900--Sobic003G354100 Sobic003G140900--Sobic003G132700 Sobic004G285000 Sobic004G285000 Sobic003G140900--Sobic004G285000 Sobic001G309100--Sobic001G038100 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic001G309100--Sobic007G117100
Octagon: transcription factors


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