Gene annotation
Transcriptome id Sobic.001G127400.1
Synonym Sb01g011160
Functional annotation yippee zinc-binding protein, putative, expressed
UniProt C5WNW1
Pfam PF03226
Panther DB PTHR13848 PTHR13848:SF5
NCBI CDD KOG3399; Predicted Yippee-type zinc-binding protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40110 : Yippee family putative zinc-binding protein
RAP-DB (Rice) LOC_Os03g49150.1 : yippee zinc-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a007703 , Zm00025a017064
Brachypodium KQK13675
Barley HORVU4Hr1G005870.4 , HORVU4Hr1G005870.5 , HORVU4Hr1G005870.6 , HORVU4Hr1G005870.3
Wheat TraesCS4A02G276800 , TraesCS4D02G034200 , TraesCS4B02G036900 , TraesCS4D02G034200
Populus -


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cDNA sequences
Sobic.001G127400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
2 Sobic.001G424500 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
3 Sobic.003G101300 expressed protein -
4 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
5 Sobic.001G350501 - K11253: histone H3
6 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
7 Sobic.003G420700 expressed protein -
8 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
9 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
10 Sobic.002G014700 OsFBX209 - F-box domain containing protein, expressed -
11 Sobic.001G349400 heat shock protein DnaJ, putative, expressed -
12 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
13 Sobic.001G285300 expressed protein -
14 Sobic.004G349100 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1
15 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
16 Sobic.002G329300 basic helix-loop-helix DND-binding domain containing protein, expressed -
17 Sobic.003G074000 expressed protein K12593: MPHOSPH6, M-phase phosphoprotein 6, animal type
18 Sobic.002G051200 PHF5-like protein domain containing protein, expressed K12834: PHD finger-like domain-containing protein 5A
19 Sobic.007G038800 expressed protein -
20 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4


Gene co-expression network
sample Sobic001G127400 Sobic001G127400 Sobic009G034400 Sobic009G034400 Sobic001G127400--Sobic009G034400 Sobic001G424500 Sobic001G424500 Sobic001G127400--Sobic001G424500 Sobic003G101300 Sobic003G101300 Sobic001G127400--Sobic003G101300 Sobic001G038100 Sobic001G038100 Sobic001G127400--Sobic001G038100 Sobic001G350501 Sobic001G350501 Sobic001G127400--Sobic001G350501 Sobic003G024800 Sobic003G024800 Sobic001G127400--Sobic003G024800 Sobic003G420700 Sobic003G420700 Sobic001G127400--Sobic003G420700 Sobic007G117100 Sobic007G117100 Sobic001G127400--Sobic007G117100 Sobic001G309100 Sobic001G309100 Sobic001G127400--Sobic001G309100 Sobic009G036900 Sobic009G036900 Sobic009G034400--Sobic009G036900 Sobic009G034400--Sobic003G024800 Sobic004G122000 Sobic004G122000 Sobic009G034400--Sobic004G122000 Sobic010G071200 Sobic010G071200 Sobic009G034400--Sobic010G071200 Sobic010G228600 Sobic010G228600 Sobic009G034400--Sobic010G228600 Sobic009G034400--Sobic001G424500 Sobic006G257900 Sobic006G257900 Sobic009G034400--Sobic006G257900 Sobic002G179500 Sobic002G179500 Sobic009G034400--Sobic002G179500 Sobic009G034400--Sobic001G309100 Sobic001G424500--Sobic009G036900 Sobic001G424500--Sobic009G034400 Sobic001G424500--Sobic001G127400 Sobic001G424500--Sobic003G101300 Sobic001G424500--Sobic003G024800 Sobic007G038800 Sobic007G038800 Sobic001G424500--Sobic007G038800 Sobic001G424500--Sobic004G122000 Sobic002G068300 Sobic002G068300 Sobic001G424500--Sobic002G068300 Sobic002G121000 Sobic002G121000 Sobic001G424500--Sobic002G121000 Sobic003G101300--Sobic001G309100 Sobic010G211300 Sobic010G211300 Sobic003G101300--Sobic010G211300 Sobic003G101300--Sobic009G034400 Sobic001G028400 Sobic001G028400 Sobic003G101300--Sobic001G028400 Sobic003G101300--Sobic010G071200 Sobic004G349100 Sobic004G349100 Sobic003G101300--Sobic004G349100 Sobic003G101300--Sobic003G024800 Sobic003G101300--Sobic009G036900 Sobic003G101300--Sobic001G424500 Sobic002G204000 Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G038100--Sobic001G309100 Sobic001G507400 Sobic001G507400 Sobic001G038100--Sobic001G507400 Sobic006G120800 Sobic006G120800 Sobic001G038100--Sobic006G120800 Sobic001G038100--Sobic007G117100 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic001G350501--Sobic003G024800 Sobic001G350501--Sobic004G349100 Sobic001G350501--Sobic001G309100 Sobic010G193800 Sobic010G193800 Sobic001G350501--Sobic010G193800 Sobic008G142700 Sobic008G142700 Sobic001G350501--Sobic008G142700 Sobic001G350501--Sobic009G034400 Sobic001G350501--Sobic003G420700 Sobic001G350501--Sobic009G036900 Sobic007G063200 Sobic007G063200 Sobic001G350501--Sobic007G063200 Sobic003G024800--Sobic009G036900 Sobic003G024800--Sobic004G349100 Sobic003G024800--Sobic001G309100 Sobic003G024800--Sobic009G034400 Sobic003G024800--Sobic001G350501 Sobic003G024800--Sobic007G063200 Sobic003G024800--Sobic010G071200 Sobic003G024800--Sobic008G142700 Sobic003G024800--Sobic010G228600 Sobic003G420700--Sobic010G193800 Sobic003G420700--Sobic001G038100 Sobic002G077900 Sobic002G077900 Sobic003G420700--Sobic002G077900 Sobic003G420700--Sobic001G309100 Sobic001G285300 Sobic001G285300 Sobic003G420700--Sobic001G285300 Sobic003G420700--Sobic007G117100 Sobic002G014700 Sobic002G014700 Sobic003G420700--Sobic002G014700 Sobic003G420700--Sobic009G036900 Sobic003G420700--Sobic003G024800 Sobic007G117100--Sobic001G038100 Sobic003G433500 Sobic003G433500 Sobic007G117100--Sobic003G433500 Sobic003G132700 Sobic003G132700 Sobic007G117100--Sobic003G132700 Sobic007G117100--Sobic006G120800 Sobic007G117100--Sobic001G507400 Sobic007G117100--Sobic001G309100 Sobic003G354100 Sobic003G354100 Sobic007G117100--Sobic003G354100 Sobic007G117100--Sobic002G014700 Sobic002G089900 Sobic002G089900 Sobic007G117100--Sobic002G089900 Sobic001G309100--Sobic001G038100 Sobic001G309100--Sobic003G024800 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G309100--Sobic001G350501 Sobic001G309100--Sobic007G117100
Octagon: transcription factors


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