Gene annotation
Transcriptome id Sobic.003G074000.1
Synonym Sb03g006240
Functional annotation expressed protein
UniProt C5XQ21
Pfam PF10175
Panther DB PTHR13582
NCBI CDD -
KEGG Orthology K12593; MPHOSPH6, M-phase phosphoprotein 6, animal type
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59460 : scarecrow-like transcription factor 11 (SCL11)
RAP-DB (Rice) LOC_Os01g05130.1 : expressed protein
MaizeGDB (Corn) Zm00025a023478
Brachypodium PNT69921 , KQK02671
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G074000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G269600 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
2 Sobic.002G272800 mediator of RNA polymerase II transcription subunit 10, putative, expressed K15151: MED10, mediator of RNA polymerase II transcription subunit 10
3 Sobic.005G162600 zinc knuckle domain containing protein, expressed -
4 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
5 Sobic.002G362300 prefoldin, putative, expressed -
6 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
7 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
8 Sobic.003G437500 syntaxin 6, putative, expressed -
9 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
10 Sobic.005G229000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
11 Sobic.008G101800 expressed protein -
12 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
14 Sobic.001G056200 expressed protein -
15 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
16 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
17 Sobic.001G179000 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
18 Sobic.008G073000 expressed protein -
19 Sobic.002G329300 basic helix-loop-helix DND-binding domain containing protein, expressed -
20 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G074000 Sobic003G074000 Sobic010G269600 Sobic010G269600 Sobic003G074000--Sobic010G269600 Sobic002G272800 Sobic002G272800 Sobic003G074000--Sobic002G272800 Sobic005G162600 Sobic005G162600 Sobic003G074000--Sobic005G162600 Sobic001G309100 Sobic001G309100 Sobic003G074000--Sobic001G309100 Sobic002G362300 Sobic002G362300 Sobic003G074000--Sobic002G362300 Sobic003G359300 Sobic003G359300 Sobic003G074000--Sobic003G359300 Sobic007G063200 Sobic007G063200 Sobic003G074000--Sobic007G063200 Sobic003G437500 Sobic003G437500 Sobic003G074000--Sobic003G437500 Sobic002G095700 Sobic002G095700 Sobic003G074000--Sobic002G095700 Sobic005G229000 Sobic005G229000 Sobic010G269600--Sobic005G229000 Sobic010G000700 Sobic010G000700 Sobic010G269600--Sobic010G000700 Sobic010G269600--Sobic003G074000 Sobic002G045400 Sobic002G045400 Sobic010G269600--Sobic002G045400 Sobic003G248500 Sobic003G248500 Sobic010G269600--Sobic003G248500 Sobic010G269600--Sobic003G359300 Sobic010G202600 Sobic010G202600 Sobic010G269600--Sobic010G202600 Sobic010G174800 Sobic010G174800 Sobic010G269600--Sobic010G174800 Sobic010G269600--Sobic002G362300 Sobic004G150400 Sobic004G150400 Sobic002G272800--Sobic004G150400 Sobic006G088100 Sobic006G088100 Sobic002G272800--Sobic006G088100 Sobic006G109300 Sobic006G109300 Sobic002G272800--Sobic006G109300 Sobic002G272800--Sobic003G074000 Sobic002G272800--Sobic003G437500 Sobic004G119000 Sobic004G119000 Sobic002G272800--Sobic004G119000 Sobic001G028400 Sobic001G028400 Sobic002G272800--Sobic001G028400 Sobic010G033400 Sobic010G033400 Sobic002G272800--Sobic010G033400 Sobic002G272800--Sobic001G309100 Sobic001G222300 Sobic001G222300 Sobic005G162600--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic005G162600--Sobic008G116500 Sobic008G101800 Sobic008G101800 Sobic005G162600--Sobic008G101800 Sobic001G439500 Sobic001G439500 Sobic005G162600--Sobic001G439500 Sobic003G093600 Sobic003G093600 Sobic005G162600--Sobic003G093600 Sobic007G008800 Sobic007G008800 Sobic005G162600--Sobic007G008800 Sobic006G129700 Sobic006G129700 Sobic005G162600--Sobic006G129700 Sobic007G037100 Sobic007G037100 Sobic005G162600--Sobic007G037100 Sobic003G204000 Sobic003G204000 Sobic005G162600--Sobic003G204000 Sobic001G038100 Sobic001G038100 Sobic001G309100--Sobic001G038100 Sobic003G024800 Sobic003G024800 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G309100--Sobic010G071200 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic007G117100 Sobic007G117100 Sobic001G309100--Sobic007G117100 Sobic005G009200 Sobic005G009200 Sobic002G362300--Sobic005G009200 Sobic001G371000 Sobic001G371000 Sobic002G362300--Sobic001G371000 Sobic003G433500 Sobic003G433500 Sobic002G362300--Sobic003G433500 Sobic002G362300--Sobic005G229000 Sobic008G073000 Sobic008G073000 Sobic002G362300--Sobic008G073000 Sobic009G030300 Sobic009G030300 Sobic002G362300--Sobic009G030300 Sobic002G362300--Sobic002G095700 Sobic005G030300 Sobic005G030300 Sobic002G362300--Sobic005G030300 Sobic009G044900 Sobic009G044900 Sobic002G362300--Sobic009G044900 Sobic003G359300--Sobic010G033400 Sobic004G263900 Sobic004G263900 Sobic003G359300--Sobic004G263900 Sobic003G359300--Sobic003G248500 Sobic003G359300--Sobic007G063200 Sobic003G359300--Sobic001G028400 Sobic008G174300 Sobic008G174300 Sobic003G359300--Sobic008G174300 Sobic001G056200 Sobic001G056200 Sobic003G359300--Sobic001G056200 Sobic002G365100 Sobic002G365100 Sobic003G359300--Sobic002G365100 Sobic002G058300 Sobic002G058300 Sobic003G359300--Sobic002G058300 Sobic007G063200--Sobic004G263900 Sobic007G063200--Sobic001G028400 Sobic007G063200--Sobic003G359300 Sobic007G063200--Sobic010G033400 Sobic007G063200--Sobic010G071200 Sobic003G026300 Sobic003G026300 Sobic007G063200--Sobic003G026300 Sobic010G055500 Sobic010G055500 Sobic007G063200--Sobic010G055500 Sobic006G257900 Sobic006G257900 Sobic007G063200--Sobic006G257900 Sobic008G142700 Sobic008G142700 Sobic007G063200--Sobic008G142700 Sobic003G437500--Sobic001G028400 Sobic003G437500--Sobic001G056200 Sobic003G437500--Sobic006G088100 Sobic003G202800 Sobic003G202800 Sobic003G437500--Sobic003G202800 Sobic006G092800 Sobic006G092800 Sobic003G437500--Sobic006G092800 Sobic004G013600 Sobic004G013600 Sobic003G437500--Sobic004G013600 Sobic007G088900 Sobic007G088900 Sobic003G437500--Sobic007G088900 Sobic003G437500--Sobic004G263900 Sobic003G437500--Sobic003G359300 Sobic006G278200 Sobic006G278200 Sobic002G095700--Sobic006G278200 Sobic002G095700--Sobic008G073000 Sobic002G095700--Sobic005G030300 Sobic008G165100 Sobic008G165100 Sobic002G095700--Sobic008G165100 Sobic002G067800 Sobic002G067800 Sobic002G095700--Sobic002G067800 Sobic002G095700--Sobic003G433500 Sobic002G089900 Sobic002G089900 Sobic002G095700--Sobic002G089900 Sobic009G022100 Sobic009G022100 Sobic002G095700--Sobic009G022100 Sobic004G078100 Sobic004G078100 Sobic002G095700--Sobic004G078100
Octagon: transcription factors


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