Gene annotation
Transcriptome id Sobic.002G362300.1,Sobic.002G362300.3,Sobic.002G362300.2
Synonym Sb02g038240
Functional annotation prefoldin, putative, expressed
UniProt C5XD68
Pfam PF02996
Panther DB PTHR13345 PTHR13345:SF4
NCBI CDD KOG3047; Predicted transcriptional regulator UXT
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26660 : Prefoldin chaperone subunit family protein
RAP-DB (Rice) LOC_Os07g40460.1 : prefoldin, putative, expressed
MaizeGDB (Corn) Zm00025a048636
Brachypodium KQK20792 , KQK20791
Barley HORVU2Hr1G110740.5 , HORVU2Hr1G110740.8 , HORVU5Hr1G072350.6 , HORVU2Hr1G110740.4 , HORVU2Hr1G110740.7 , HORVU2Hr1G110740.6 , HORVU2Hr1G110740.1 , HORVU2Hr1G110740.3 , HORVU2Hr1G110740.2
Wheat TraesCS2A02G496900 , TraesCS2A02G496900 , TraesCS5A02G259300 , TraesCS2B02G525200 , TraesCS5A02G259300 , TraesCS2D02G497100 , TraesCS2D02G497100
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G362300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G009200 expressed protein -
2 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein
3 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
4 Sobic.005G229000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
5 Sobic.008G073000 expressed protein -
6 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
7 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
8 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
9 Sobic.009G044900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
10 Sobic.002G177400 expressed protein -
11 Sobic.004G077000 expressed protein -
12 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
13 Sobic.002G347700 expressed protein -
14 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
15 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
16 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
17 Sobic.003G074000 expressed protein K12593: MPHOSPH6, M-phase phosphoprotein 6, animal type
18 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
19 Sobic.004G088400 GTPase-activating protein, putative, expressed -
20 Sobic.010G269600 RNA recognition motif containing protein, expressed K12897: transformer-2 protein


Gene co-expression network
sample Sobic002G362300 Sobic002G362300 Sobic005G009200 Sobic005G009200 Sobic002G362300--Sobic005G009200 Sobic001G371000 Sobic001G371000 Sobic002G362300--Sobic001G371000 Sobic003G433500 Sobic003G433500 Sobic002G362300--Sobic003G433500 Sobic005G229000 Sobic005G229000 Sobic002G362300--Sobic005G229000 Sobic008G073000 Sobic008G073000 Sobic002G362300--Sobic008G073000 Sobic009G030300 Sobic009G030300 Sobic002G362300--Sobic009G030300 Sobic002G095700 Sobic002G095700 Sobic002G362300--Sobic002G095700 Sobic005G030300 Sobic005G030300 Sobic002G362300--Sobic005G030300 Sobic009G044900 Sobic009G044900 Sobic002G362300--Sobic009G044900 Sobic005G009200--Sobic002G362300 Sobic003G442000 Sobic003G442000 Sobic005G009200--Sobic003G442000 Sobic005G009200--Sobic001G371000 Sobic008G129700 Sobic008G129700 Sobic005G009200--Sobic008G129700 Sobic008G117200 Sobic008G117200 Sobic005G009200--Sobic008G117200 Sobic009G151200 Sobic009G151200 Sobic005G009200--Sobic009G151200 Sobic002G259800 Sobic002G259800 Sobic005G009200--Sobic002G259800 Sobic002G421700 Sobic002G421700 Sobic005G009200--Sobic002G421700 Sobic008G034600 Sobic008G034600 Sobic005G009200--Sobic008G034600 Sobic001G371000--Sobic002G362300 Sobic001G371000--Sobic005G009200 Sobic004G026100 Sobic004G026100 Sobic001G371000--Sobic004G026100 Sobic003G239900 Sobic003G239900 Sobic001G371000--Sobic003G239900 Sobic009G216000 Sobic009G216000 Sobic001G371000--Sobic009G216000 Sobic001G371000--Sobic009G151200 Sobic009G022100 Sobic009G022100 Sobic001G371000--Sobic009G022100 Sobic001G371000--Sobic003G442000 Sobic001G371000--Sobic008G117200 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic006G248500 Sobic006G248500 Sobic003G433500--Sobic006G248500 Sobic003G433500--Sobic002G362300 Sobic003G433500--Sobic002G259800 Sobic010G269600 Sobic010G269600 Sobic005G229000--Sobic010G269600 Sobic004G077000 Sobic004G077000 Sobic005G229000--Sobic004G077000 Sobic005G229000--Sobic002G362300 Sobic005G229000--Sobic009G044900 Sobic003G074000 Sobic003G074000 Sobic005G229000--Sobic003G074000 Sobic005G229000--Sobic005G009200 Sobic004G211400 Sobic004G211400 Sobic005G229000--Sobic004G211400 Sobic002G157200 Sobic002G157200 Sobic005G229000--Sobic002G157200 Sobic007G130300 Sobic007G130300 Sobic005G229000--Sobic007G130300 Sobic008G073000--Sobic005G030300 Sobic008G073000--Sobic002G045400 Sobic008G073000--Sobic002G095700 Sobic008G101800 Sobic008G101800 Sobic008G073000--Sobic008G101800 Sobic001G202266 Sobic001G202266 Sobic008G073000--Sobic001G202266 Sobic006G278200 Sobic006G278200 Sobic008G073000--Sobic006G278200 Sobic008G165100 Sobic008G165100 Sobic008G073000--Sobic008G165100 Sobic010G174800 Sobic010G174800 Sobic008G073000--Sobic010G174800 Sobic002G067800 Sobic002G067800 Sobic008G073000--Sobic002G067800 Sobic002G177400 Sobic002G177400 Sobic009G030300--Sobic002G177400 Sobic001G226000 Sobic001G226000 Sobic009G030300--Sobic001G226000 Sobic004G061900 Sobic004G061900 Sobic009G030300--Sobic004G061900 Sobic009G030300--Sobic009G044900 Sobic004G013600 Sobic004G013600 Sobic009G030300--Sobic004G013600 Sobic004G088400 Sobic004G088400 Sobic009G030300--Sobic004G088400 Sobic009G030300--Sobic008G117200 Sobic002G334600 Sobic002G334600 Sobic009G030300--Sobic002G334600 Sobic009G030300--Sobic008G129700 Sobic002G095700--Sobic006G278200 Sobic002G095700--Sobic008G073000 Sobic002G095700--Sobic005G030300 Sobic002G095700--Sobic008G165100 Sobic002G095700--Sobic002G067800 Sobic002G095700--Sobic003G433500 Sobic002G089900 Sobic002G089900 Sobic002G095700--Sobic002G089900 Sobic002G095700--Sobic009G022100 Sobic004G078100 Sobic004G078100 Sobic002G095700--Sobic004G078100 Sobic005G030300--Sobic008G073000 Sobic005G030300--Sobic008G165100 Sobic005G030300--Sobic002G095700 Sobic005G030300--Sobic003G433500 Sobic005G030300--Sobic002G045400 Sobic005G030300--Sobic006G278200 Sobic005G030300--Sobic008G101800 Sobic005G030300--Sobic002G362300 Sobic005G030300--Sobic009G022100 Sobic009G044900--Sobic009G030300 Sobic009G044900--Sobic002G089900 Sobic009G044900--Sobic006G248500 Sobic009G044900--Sobic003G433500 Sobic009G044900--Sobic002G177400 Sobic004G347100 Sobic004G347100 Sobic009G044900--Sobic004G347100 Sobic001G469800 Sobic001G469800 Sobic009G044900--Sobic001G469800 Sobic009G044900--Sobic002G362300 Sobic009G044900--Sobic004G013600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.