Gene annotation
Transcriptome id Sobic.004G077000.1
Synonym
Functional annotation expressed protein
UniProt A0A194YPC8
Pfam -
Panther DB PTHR37740
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51500 : -
RAP-DB (Rice) LOC_Os02g10010.2 : expressed protein
MaizeGDB (Corn) Zm00025a019664
Brachypodium -
Barley HORVU6Hr1G034150.1 , HORVU6Hr1G034150.3 , HORVU6Hr1G034150.2
Wheat -
Populus -


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cDNA sequences
Sobic.004G077000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G229000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
2 Sobic.001G428400 - K12826: SF3A2, splicing factor 3A subunit 2
3 Sobic.002G362300 prefoldin, putative, expressed -
4 Sobic.003G442000 IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
5 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
6 Sobic.002G157200 expressed protein -
7 Sobic.009G225200 expressed protein -
8 Sobic.005G009200 expressed protein -
9 Sobic.007G224900 RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
10 Sobic.010G269600 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
11 Sobic.004G211400 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
12 Sobic.003G043100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
13 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
14 Sobic.001G252500 expressed protein -
15 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
16 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
17 Sobic.002G329300 basic helix-loop-helix DND-binding domain containing protein, expressed -
18 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
19 Sobic.002G088700 domain of unknown function domain containing protein, expressed -
20 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein


Gene co-expression network
sample Sobic004G077000 Sobic004G077000 Sobic005G229000 Sobic005G229000 Sobic004G077000--Sobic005G229000 Sobic001G428400 Sobic001G428400 Sobic004G077000--Sobic001G428400 Sobic002G362300 Sobic002G362300 Sobic004G077000--Sobic002G362300 Sobic003G442000 Sobic003G442000 Sobic004G077000--Sobic003G442000 Sobic008G034600 Sobic008G034600 Sobic004G077000--Sobic008G034600 Sobic002G157200 Sobic002G157200 Sobic004G077000--Sobic002G157200 Sobic009G225200 Sobic009G225200 Sobic004G077000--Sobic009G225200 Sobic005G009200 Sobic005G009200 Sobic004G077000--Sobic005G009200 Sobic007G224900 Sobic007G224900 Sobic004G077000--Sobic007G224900 Sobic010G269600 Sobic010G269600 Sobic005G229000--Sobic010G269600 Sobic005G229000--Sobic004G077000 Sobic005G229000--Sobic002G362300 Sobic009G044900 Sobic009G044900 Sobic005G229000--Sobic009G044900 Sobic003G074000 Sobic003G074000 Sobic005G229000--Sobic003G074000 Sobic005G229000--Sobic005G009200 Sobic004G211400 Sobic004G211400 Sobic005G229000--Sobic004G211400 Sobic005G229000--Sobic002G157200 Sobic007G130300 Sobic007G130300 Sobic005G229000--Sobic007G130300 Sobic001G428400--Sobic004G077000 Sobic009G117300 Sobic009G117300 Sobic001G428400--Sobic009G117300 Sobic001G428400--Sobic004G211400 Sobic001G039700 Sobic001G039700 Sobic001G428400--Sobic001G039700 Sobic004G006300 Sobic004G006300 Sobic001G428400--Sobic004G006300 Sobic001G428400--Sobic008G034600 Sobic003G043100 Sobic003G043100 Sobic001G428400--Sobic003G043100 Sobic009G117400 Sobic009G117400 Sobic001G428400--Sobic009G117400 Sobic008G136000 Sobic008G136000 Sobic001G428400--Sobic008G136000 Sobic002G362300--Sobic005G009200 Sobic001G371000 Sobic001G371000 Sobic002G362300--Sobic001G371000 Sobic003G433500 Sobic003G433500 Sobic002G362300--Sobic003G433500 Sobic002G362300--Sobic005G229000 Sobic008G073000 Sobic008G073000 Sobic002G362300--Sobic008G073000 Sobic009G030300 Sobic009G030300 Sobic002G362300--Sobic009G030300 Sobic002G095700 Sobic002G095700 Sobic002G362300--Sobic002G095700 Sobic005G030300 Sobic005G030300 Sobic002G362300--Sobic005G030300 Sobic002G362300--Sobic009G044900 Sobic003G442000--Sobic005G009200 Sobic005G015900 Sobic005G015900 Sobic003G442000--Sobic005G015900 Sobic004G018300 Sobic004G018300 Sobic003G442000--Sobic004G018300 Sobic003G258900 Sobic003G258900 Sobic003G442000--Sobic003G258900 Sobic010G202600 Sobic010G202600 Sobic003G442000--Sobic010G202600 Sobic009G074700 Sobic009G074700 Sobic003G442000--Sobic009G074700 Sobic002G197100 Sobic002G197100 Sobic003G442000--Sobic002G197100 Sobic002G158700 Sobic002G158700 Sobic003G442000--Sobic002G158700 Sobic001G090400 Sobic001G090400 Sobic003G442000--Sobic001G090400 Sobic007G205800 Sobic007G205800 Sobic008G034600--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G034600--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic008G034600--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic008G034600--Sobic004G271900 Sobic008G117200 Sobic008G117200 Sobic008G034600--Sobic008G117200 Sobic002G421700 Sobic002G421700 Sobic008G034600--Sobic002G421700 Sobic009G022200 Sobic009G022200 Sobic008G034600--Sobic009G022200 Sobic008G034600--Sobic007G224900 Sobic003G346000 Sobic003G346000 Sobic008G034600--Sobic003G346000 Sobic002G157200--Sobic008G034600 Sobic002G157200--Sobic007G224900 Sobic002G157200--Sobic004G211400 Sobic001G045700 Sobic001G045700 Sobic002G157200--Sobic001G045700 Sobic006G210200 Sobic006G210200 Sobic002G157200--Sobic006G210200 Sobic002G049000 Sobic002G049000 Sobic002G157200--Sobic002G049000 Sobic002G157200--Sobic009G022200 Sobic002G157200--Sobic002G421700 Sobic002G061400 Sobic002G061400 Sobic002G157200--Sobic002G061400 Sobic009G225200--Sobic009G117300 Sobic009G225200--Sobic009G117400 Sobic005G015100 Sobic005G015100 Sobic009G225200--Sobic005G015100 Sobic001G043900 Sobic001G043900 Sobic009G225200--Sobic001G043900 Sobic009G225200--Sobic003G258900 Sobic009G225200--Sobic004G271900 Sobic004G348100 Sobic004G348100 Sobic009G225200--Sobic004G348100 Sobic009G225200--Sobic003G442000 Sobic009G015800 Sobic009G015800 Sobic009G225200--Sobic009G015800 Sobic005G009200--Sobic002G362300 Sobic005G009200--Sobic003G442000 Sobic005G009200--Sobic001G371000 Sobic008G129700 Sobic008G129700 Sobic005G009200--Sobic008G129700 Sobic005G009200--Sobic008G117200 Sobic009G151200 Sobic009G151200 Sobic005G009200--Sobic009G151200 Sobic002G259800 Sobic002G259800 Sobic005G009200--Sobic002G259800 Sobic005G009200--Sobic002G421700 Sobic005G009200--Sobic008G034600 Sobic007G224900--Sobic008G034600 Sobic007G224900--Sobic002G157200 Sobic007G224900--Sobic001G045700 Sobic001G179000 Sobic001G179000 Sobic007G224900--Sobic001G179000 Sobic007G224900--Sobic004G211400 Sobic009G059600 Sobic009G059600 Sobic007G224900--Sobic009G059600 Sobic007G224900--Sobic008G117200 Sobic007G224900--Sobic002G049000 Sobic007G224900--Sobic009G022200
Octagon: transcription factors


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