Gene annotation
Transcriptome id Sobic.003G442000.1
Synonym ATIPT2, IPPT, IPT2, Sb03g047160
Functional annotation IPP transferase, putative, expressed
UniProt C5XJC3
Pfam PF12171 PF01715
Panther DB PTHR11088 PTHR11088:SF26
NCBI CDD KOG1384; tRNA delta(2)-isopentenylpyrophosphate transferase
KEGG Orthology K00791; miaA, tRNA dimethylallyltransferase
Gene Ontology GO:0008033; tRNA processing


Orthologs (automatic annotation)
TAIR AT2G27760 : tRNAisopentenyltransferase 2
RAP-DB (Rice) LOC_Os01g73760.1 : IPP transferase, putative, expressed
MaizeGDB (Corn) Zm00025a025848
Brachypodium KQK22935 , KQK22933 , KQK22934
Barley HORVU2Hr1G062320.11 , HORVU2Hr1G062320.10 , HORVU2Hr1G062320.13 , HORVU2Hr1G062320.12 , HORVU2Hr1G062320.15 , HORVU2Hr1G062320.14 , HORVU2Hr1G062320.1 , HORVU2Hr1G062320.2 , HORVU2Hr1G061960.1 , HORVU2Hr1G062320.9 , HORVU2Hr1G062320.8 , HORVU2Hr1G062320.5 , HORVU2Hr1G062320.4 , HORVU2Hr1G062320.7 , HORVU2Hr1G062320.6 , HORVU2Hr1G062320.3 , HORVU2Hr1G061970.1
Wheat TraesCS2D02G258000 , TraesCS2D02G258000 , TraesCS2D02G258000 , TraesCS2B02G276300 , TraesCS2A02G265700
Populus -


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cDNA sequences
Sobic.003G442000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G009200 expressed protein -
2 Sobic.005G015900 dnaJ domain containing protein, expressed -
3 Sobic.004G018300 expressed protein K06970: 23S rRNA (adenine1618-N6)-methyltransferase
4 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
5 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
6 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
7 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
8 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
9 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
10 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.009G225200 expressed protein -
12 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
13 Sobic.004G077000 expressed protein -
14 Sobic.008G152900 MATH domain containing protein, expressed -
15 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
16 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein
17 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
18 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
19 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
20 Sobic.007G000800 expressed protein -


Gene co-expression network
sample Sobic003G442000 Sobic003G442000 Sobic005G009200 Sobic005G009200 Sobic003G442000--Sobic005G009200 Sobic005G015900 Sobic005G015900 Sobic003G442000--Sobic005G015900 Sobic004G018300 Sobic004G018300 Sobic003G442000--Sobic004G018300 Sobic003G258900 Sobic003G258900 Sobic003G442000--Sobic003G258900 Sobic010G202600 Sobic010G202600 Sobic003G442000--Sobic010G202600 Sobic009G074700 Sobic009G074700 Sobic003G442000--Sobic009G074700 Sobic002G197100 Sobic002G197100 Sobic003G442000--Sobic002G197100 Sobic002G158700 Sobic002G158700 Sobic003G442000--Sobic002G158700 Sobic001G090400 Sobic001G090400 Sobic003G442000--Sobic001G090400 Sobic002G362300 Sobic002G362300 Sobic005G009200--Sobic002G362300 Sobic005G009200--Sobic003G442000 Sobic001G371000 Sobic001G371000 Sobic005G009200--Sobic001G371000 Sobic008G129700 Sobic008G129700 Sobic005G009200--Sobic008G129700 Sobic008G117200 Sobic008G117200 Sobic005G009200--Sobic008G117200 Sobic009G151200 Sobic009G151200 Sobic005G009200--Sobic009G151200 Sobic002G259800 Sobic002G259800 Sobic005G009200--Sobic002G259800 Sobic002G421700 Sobic002G421700 Sobic005G009200--Sobic002G421700 Sobic008G034600 Sobic008G034600 Sobic005G009200--Sobic008G034600 Sobic006G032400 Sobic006G032400 Sobic005G015900--Sobic006G032400 Sobic004G031700 Sobic004G031700 Sobic005G015900--Sobic004G031700 Sobic004G219100 Sobic004G219100 Sobic005G015900--Sobic004G219100 Sobic001G176200 Sobic001G176200 Sobic005G015900--Sobic001G176200 Sobic002G320500 Sobic002G320500 Sobic005G015900--Sobic002G320500 Sobic005G015900--Sobic001G090400 Sobic005G015900--Sobic002G158700 Sobic001G303675 Sobic001G303675 Sobic005G015900--Sobic001G303675 Sobic003G445400 Sobic003G445400 Sobic005G015900--Sobic003G445400 Sobic004G087600 Sobic004G087600 Sobic004G018300--Sobic004G087600 Sobic001G167200 Sobic001G167200 Sobic004G018300--Sobic001G167200 Sobic008G011100 Sobic008G011100 Sobic004G018300--Sobic008G011100 Sobic004G018300--Sobic002G158700 Sobic002G396000 Sobic002G396000 Sobic004G018300--Sobic002G396000 Sobic001G081000 Sobic001G081000 Sobic004G018300--Sobic001G081000 Sobic008G083000 Sobic008G083000 Sobic004G018300--Sobic008G083000 Sobic009G126400 Sobic009G126400 Sobic004G018300--Sobic009G126400 Sobic004G223600 Sobic004G223600 Sobic004G018300--Sobic004G223600 Sobic003G258900--Sobic002G396000 Sobic003G258900--Sobic002G158700 Sobic003G267800 Sobic003G267800 Sobic003G258900--Sobic003G267800 Sobic006G102100 Sobic006G102100 Sobic003G258900--Sobic006G102100 Sobic003G258900--Sobic001G081000 Sobic006G226300 Sobic006G226300 Sobic003G258900--Sobic006G226300 Sobic003G258900--Sobic003G442000 Sobic009G225200 Sobic009G225200 Sobic003G258900--Sobic009G225200 Sobic009G046700 Sobic009G046700 Sobic003G258900--Sobic009G046700 Sobic007G111100 Sobic007G111100 Sobic010G202600--Sobic007G111100 Sobic001G469800 Sobic001G469800 Sobic010G202600--Sobic001G469800 Sobic001G131800 Sobic001G131800 Sobic010G202600--Sobic001G131800 Sobic003G185200 Sobic003G185200 Sobic010G202600--Sobic003G185200 Sobic003G205501 Sobic003G205501 Sobic010G202600--Sobic003G205501 Sobic006G267300 Sobic006G267300 Sobic010G202600--Sobic006G267300 Sobic009G000500 Sobic009G000500 Sobic010G202600--Sobic009G000500 Sobic008G174300 Sobic008G174300 Sobic010G202600--Sobic008G174300 Sobic003G081000 Sobic003G081000 Sobic010G202600--Sobic003G081000 Sobic001G246500 Sobic001G246500 Sobic009G074700--Sobic001G246500 Sobic009G074700--Sobic010G202600 Sobic010G278600 Sobic010G278600 Sobic009G074700--Sobic010G278600 Sobic006G180700 Sobic006G180700 Sobic009G074700--Sobic006G180700 Sobic009G074700--Sobic002G259800 Sobic009G000400 Sobic009G000400 Sobic009G074700--Sobic009G000400 Sobic002G262700 Sobic002G262700 Sobic009G074700--Sobic002G262700 Sobic009G195200 Sobic009G195200 Sobic009G074700--Sobic009G195200 Sobic006G138000 Sobic006G138000 Sobic009G074700--Sobic006G138000 Sobic004G007300 Sobic004G007300 Sobic002G197100--Sobic004G007300 Sobic006G173100 Sobic006G173100 Sobic002G197100--Sobic006G173100 Sobic004G345700 Sobic004G345700 Sobic002G197100--Sobic004G345700 Sobic002G197100--Sobic001G176200 Sobic002G197100--Sobic001G090400 Sobic001G425000 Sobic001G425000 Sobic002G197100--Sobic001G425000 Sobic003G248500 Sobic003G248500 Sobic002G197100--Sobic003G248500 Sobic001G514000 Sobic001G514000 Sobic002G197100--Sobic001G514000 Sobic002G370900 Sobic002G370900 Sobic002G197100--Sobic002G370900 Sobic003G401000 Sobic003G401000 Sobic002G158700--Sobic003G401000 Sobic001G464200 Sobic001G464200 Sobic002G158700--Sobic001G464200 Sobic002G158700--Sobic001G167200 Sobic002G158700--Sobic004G031700 Sobic002G158700--Sobic003G445400 Sobic007G000800 Sobic007G000800 Sobic002G158700--Sobic007G000800 Sobic007G061700 Sobic007G061700 Sobic002G158700--Sobic007G061700 Sobic008G149800 Sobic008G149800 Sobic002G158700--Sobic008G149800 Sobic002G158700--Sobic002G396000 Sobic008G067600 Sobic008G067600 Sobic001G090400--Sobic008G067600 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400
Octagon: transcription factors


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