Gene annotation
Transcriptome id Sobic.002G088700.1
Synonym Sb02g007330
Functional annotation domain of unknown function domain containing protein, expressed
UniProt C5X200
Pfam PF03619
Panther DB PTHR23423 PTHR23423:SF35
NCBI CDD KOG2641; Predicted seven transmembrane receptor - rhodopsin family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05940 : Protein of unknown function (DUF300)
RAP-DB (Rice) LOC_Os07g14090.1 : domain of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016395 , Zm00025a008886 , Zm00025a045485
Brachypodium KQK12354 , KQK12355 , KQK20278 , KQK20274 , KQK20275 , KQK20276 , KQK20277 , KQK20272 , KQK20273
Barley HORVU5Hr1G115470.4 , HORVU5Hr1G115470.3 , HORVU5Hr1G115470.2 , HORVU5Hr1G115470.1
Wheat TraesCS5D02G505900 , TraesCS4A02G367500 , TraesCS5B02G505200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
2 Sobic.004G083200 targeting protein for Xklp2, putative, expressed -
3 Sobic.001G206000 acyltransferase, putative, expressed K00655: 1-acyl-sn-glycerol-3-phosphate acyltransferase
4 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
5 Sobic.004G077000 expressed protein -
6 Sobic.004G152000 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.007G115900 SAM domain family protein, expressed -
9 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
10 Sobic.004G349100 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1
11 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
12 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
13 Sobic.002G250400 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
14 Sobic.010G012600 expressed protein -
15 Sobic.003G311000 histone-lysine N-methyltransferase SUVR3, putative, expressed -
16 Sobic.006G275600 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
17 Sobic.004G122000 protein of unknown function DUF502 domain containing protein, expressed -
18 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
19 Sobic.001G230900 - K07910: Ras-related protein Rab-18
20 Sobic.003G389800 nucleotide-sugar transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic002G088700 Sobic002G088700 Sobic001G281700 Sobic001G281700 Sobic002G088700--Sobic001G281700 Sobic004G083200 Sobic004G083200 Sobic002G088700--Sobic004G083200 Sobic001G206000 Sobic001G206000 Sobic002G088700--Sobic001G206000 Sobic001G390500 Sobic001G390500 Sobic002G088700--Sobic001G390500 Sobic004G077000 Sobic004G077000 Sobic002G088700--Sobic004G077000 Sobic004G152000 Sobic004G152000 Sobic002G088700--Sobic004G152000 Sobic003G248500 Sobic003G248500 Sobic002G088700--Sobic003G248500 Sobic007G115900 Sobic007G115900 Sobic002G088700--Sobic007G115900 Sobic003G024800 Sobic003G024800 Sobic002G088700--Sobic003G024800 Sobic001G281700--Sobic001G206000 Sobic001G281700--Sobic002G088700 Sobic001G149700 Sobic001G149700 Sobic001G281700--Sobic001G149700 Sobic001G281700--Sobic007G115900 Sobic010G071200 Sobic010G071200 Sobic001G281700--Sobic010G071200 Sobic010G055500 Sobic010G055500 Sobic001G281700--Sobic010G055500 Sobic006G257900 Sobic006G257900 Sobic001G281700--Sobic006G257900 Sobic009G032300 Sobic009G032300 Sobic001G281700--Sobic009G032300 Sobic006G254600 Sobic006G254600 Sobic001G281700--Sobic006G254600 Sobic004G083200--Sobic002G088700 Sobic002G250400 Sobic002G250400 Sobic004G083200--Sobic002G250400 Sobic003G380500 Sobic003G380500 Sobic004G083200--Sobic003G380500 Sobic004G122000 Sobic004G122000 Sobic004G083200--Sobic004G122000 Sobic010G046400 Sobic010G046400 Sobic004G083200--Sobic010G046400 Sobic008G099500 Sobic008G099500 Sobic004G083200--Sobic008G099500 Sobic003G328800 Sobic003G328800 Sobic004G083200--Sobic003G328800 Sobic004G349100 Sobic004G349100 Sobic004G083200--Sobic004G349100 Sobic004G083200--Sobic001G281700 Sobic003G116700 Sobic003G116700 Sobic001G206000--Sobic003G116700 Sobic001G206000--Sobic001G149700 Sobic009G065000 Sobic009G065000 Sobic001G206000--Sobic009G065000 Sobic001G206000--Sobic010G055500 Sobic001G206000--Sobic001G281700 Sobic004G231400 Sobic004G231400 Sobic001G206000--Sobic004G231400 Sobic003G317200 Sobic003G317200 Sobic001G206000--Sobic003G317200 Sobic001G206000--Sobic010G071200 Sobic007G079700 Sobic007G079700 Sobic001G206000--Sobic007G079700 Sobic001G083600 Sobic001G083600 Sobic001G390500--Sobic001G083600 Sobic001G390500--Sobic003G248500 Sobic001G390500--Sobic010G055500 Sobic007G111100 Sobic007G111100 Sobic001G390500--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic001G390500--Sobic004G263900 Sobic003G189900 Sobic003G189900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic001G390500--Sobic010G071200 Sobic002G084300 Sobic002G084300 Sobic001G390500--Sobic002G084300 Sobic005G229000 Sobic005G229000 Sobic004G077000--Sobic005G229000 Sobic001G428400 Sobic001G428400 Sobic004G077000--Sobic001G428400 Sobic002G362300 Sobic002G362300 Sobic004G077000--Sobic002G362300 Sobic003G442000 Sobic003G442000 Sobic004G077000--Sobic003G442000 Sobic008G034600 Sobic008G034600 Sobic004G077000--Sobic008G034600 Sobic002G157200 Sobic002G157200 Sobic004G077000--Sobic002G157200 Sobic009G225200 Sobic009G225200 Sobic004G077000--Sobic009G225200 Sobic005G009200 Sobic005G009200 Sobic004G077000--Sobic005G009200 Sobic007G224900 Sobic007G224900 Sobic004G077000--Sobic007G224900 Sobic004G152000--Sobic010G174800 Sobic003G389800 Sobic003G389800 Sobic004G152000--Sobic003G389800 Sobic010G063300 Sobic010G063300 Sobic004G152000--Sobic010G063300 Sobic004G152000--Sobic001G390500 Sobic002G121000 Sobic002G121000 Sobic004G152000--Sobic002G121000 Sobic004G152000--Sobic002G088700 Sobic001G061700 Sobic001G061700 Sobic004G152000--Sobic001G061700 Sobic004G152000--Sobic003G248500 Sobic003G084750 Sobic003G084750 Sobic004G152000--Sobic003G084750 Sobic003G359300 Sobic003G359300 Sobic003G248500--Sobic003G359300 Sobic004G283000 Sobic004G283000 Sobic003G248500--Sobic004G283000 Sobic003G248500--Sobic010G174800 Sobic003G248500--Sobic001G390500 Sobic002G197100 Sobic002G197100 Sobic003G248500--Sobic002G197100 Sobic003G185200 Sobic003G185200 Sobic003G248500--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G248500--Sobic002G365100 Sobic003G051200 Sobic003G051200 Sobic003G248500--Sobic003G051200 Sobic006G128800 Sobic006G128800 Sobic003G248500--Sobic006G128800 Sobic004G316800 Sobic004G316800 Sobic007G115900--Sobic004G316800 Sobic001G522900 Sobic001G522900 Sobic007G115900--Sobic001G522900 Sobic006G092800 Sobic006G092800 Sobic007G115900--Sobic006G092800 Sobic001G043900 Sobic001G043900 Sobic007G115900--Sobic001G043900 Sobic007G115900--Sobic009G032300 Sobic006G258900 Sobic006G258900 Sobic007G115900--Sobic006G258900 Sobic002G378200 Sobic002G378200 Sobic007G115900--Sobic002G378200 Sobic004G007300 Sobic004G007300 Sobic007G115900--Sobic004G007300 Sobic003G211700 Sobic003G211700 Sobic007G115900--Sobic003G211700 Sobic009G036900 Sobic009G036900 Sobic003G024800--Sobic009G036900 Sobic003G024800--Sobic004G349100 Sobic001G309100 Sobic001G309100 Sobic003G024800--Sobic001G309100 Sobic009G034400 Sobic009G034400 Sobic003G024800--Sobic009G034400 Sobic001G350501 Sobic001G350501 Sobic003G024800--Sobic001G350501 Sobic007G063200 Sobic007G063200 Sobic003G024800--Sobic007G063200 Sobic003G024800--Sobic010G071200 Sobic008G142700 Sobic008G142700 Sobic003G024800--Sobic008G142700 Sobic010G228600 Sobic010G228600 Sobic003G024800--Sobic010G228600
Octagon: transcription factors


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