Gene annotation
Transcriptome id Sobic.004G083200.1
Synonym Sb04g006860
Functional annotation targeting protein for Xklp2, putative, expressed
UniProt C5XXK6
Pfam PF06886
Panther DB PTHR31358 PTHR31358:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32330 : TPX2 (targeting protein for Xklp2) protein family
RAP-DB (Rice) LOC_Os02g10690.2 : targeting protein for Xklp2, putative, expressed
MaizeGDB (Corn) Zm00025a034631 , Zm00025a019566
Brachypodium -
Barley HORVU6Hr1G038450.4 , HORVU6Hr1G038450.5 , HORVU6Hr1G038450.1 , HORVU6Hr1G038450.2 , HORVU6Hr1G038450.3 , HORVU6Hr1G038450.6
Wheat TraesCS6B02G210800 , TraesCS6B02G210800
Populus -


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cDNA sequences
Sobic.004G083200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G088700 domain of unknown function domain containing protein, expressed -
2 Sobic.002G250400 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
3 Sobic.003G380500 expressed protein -
4 Sobic.004G122000 protein of unknown function DUF502 domain containing protein, expressed -
5 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
6 Sobic.008G099500 - -
7 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
8 Sobic.004G349100 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1
9 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
10 Sobic.004G077000 expressed protein -
11 Sobic.007G053400 nuclear matrix protein 1, putative, expressed -
12 Sobic.006G262600 expressed protein -
13 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
14 Sobic.001G179000 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
15 Sobic.001G116100 threonine dehydratase biosynthetic, chloroplast precursor, putative, expressed K01754: E4.3.1.19, ilvA, threonine dehydratase
16 Sobic.002G007200 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
18 Sobic.010G154150 - -
19 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.001G424500 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase


Gene co-expression network
sample Sobic004G083200 Sobic004G083200 Sobic002G088700 Sobic002G088700 Sobic004G083200--Sobic002G088700 Sobic002G250400 Sobic002G250400 Sobic004G083200--Sobic002G250400 Sobic003G380500 Sobic003G380500 Sobic004G083200--Sobic003G380500 Sobic004G122000 Sobic004G122000 Sobic004G083200--Sobic004G122000 Sobic010G046400 Sobic010G046400 Sobic004G083200--Sobic010G046400 Sobic008G099500 Sobic008G099500 Sobic004G083200--Sobic008G099500 Sobic003G328800 Sobic003G328800 Sobic004G083200--Sobic003G328800 Sobic004G349100 Sobic004G349100 Sobic004G083200--Sobic004G349100 Sobic001G281700 Sobic001G281700 Sobic004G083200--Sobic001G281700 Sobic002G088700--Sobic001G281700 Sobic002G088700--Sobic004G083200 Sobic001G206000 Sobic001G206000 Sobic002G088700--Sobic001G206000 Sobic001G390500 Sobic001G390500 Sobic002G088700--Sobic001G390500 Sobic004G077000 Sobic004G077000 Sobic002G088700--Sobic004G077000 Sobic004G152000 Sobic004G152000 Sobic002G088700--Sobic004G152000 Sobic003G248500 Sobic003G248500 Sobic002G088700--Sobic003G248500 Sobic007G115900 Sobic007G115900 Sobic002G088700--Sobic007G115900 Sobic003G024800 Sobic003G024800 Sobic002G088700--Sobic003G024800 Sobic006G262600 Sobic006G262600 Sobic002G250400--Sobic006G262600 Sobic001G049600 Sobic001G049600 Sobic002G250400--Sobic001G049600 Sobic007G191100 Sobic007G191100 Sobic002G250400--Sobic007G191100 Sobic002G250400--Sobic004G083200 Sobic002G334600 Sobic002G334600 Sobic002G250400--Sobic002G334600 Sobic009G030300 Sobic009G030300 Sobic002G250400--Sobic009G030300 Sobic002G250400--Sobic003G380500 Sobic002G250400--Sobic003G328800 Sobic002G007200 Sobic002G007200 Sobic002G250400--Sobic002G007200 Sobic003G380500--Sobic006G262600 Sobic003G380500--Sobic002G007200 Sobic001G179000 Sobic001G179000 Sobic003G380500--Sobic001G179000 Sobic002G221700 Sobic002G221700 Sobic003G380500--Sobic002G221700 Sobic003G380500--Sobic007G191100 Sobic009G164900 Sobic009G164900 Sobic003G380500--Sobic009G164900 Sobic004G250700 Sobic004G250700 Sobic003G380500--Sobic004G250700 Sobic007G195400 Sobic007G195400 Sobic003G380500--Sobic007G195400 Sobic007G008800 Sobic007G008800 Sobic003G380500--Sobic007G008800 Sobic009G034400 Sobic009G034400 Sobic004G122000--Sobic009G034400 Sobic004G048700 Sobic004G048700 Sobic004G122000--Sobic004G048700 Sobic009G036900 Sobic009G036900 Sobic004G122000--Sobic009G036900 Sobic002G176400 Sobic002G176400 Sobic004G122000--Sobic002G176400 Sobic003G416600 Sobic003G416600 Sobic004G122000--Sobic003G416600 Sobic001G036700 Sobic001G036700 Sobic004G122000--Sobic001G036700 Sobic008G108500 Sobic008G108500 Sobic004G122000--Sobic008G108500 Sobic007G192100 Sobic007G192100 Sobic004G122000--Sobic007G192100 Sobic001G285300 Sobic001G285300 Sobic004G122000--Sobic001G285300 Sobic010G173900 Sobic010G173900 Sobic010G046400--Sobic010G173900 Sobic004G227500 Sobic004G227500 Sobic010G046400--Sobic004G227500 Sobic010G046400--Sobic002G334600 Sobic002G218700 Sobic002G218700 Sobic010G046400--Sobic002G218700 Sobic007G070300 Sobic007G070300 Sobic010G046400--Sobic007G070300 Sobic002G367300 Sobic002G367300 Sobic010G046400--Sobic002G367300 Sobic009G011500 Sobic009G011500 Sobic010G046400--Sobic009G011500 Sobic010G046400--Sobic008G099500 Sobic001G247200 Sobic001G247200 Sobic010G046400--Sobic001G247200 Sobic008G090300 Sobic008G090300 Sobic008G099500--Sobic008G090300 Sobic005G099150 Sobic005G099150 Sobic008G099500--Sobic005G099150 Sobic006G022500 Sobic006G022500 Sobic008G099500--Sobic006G022500 Sobic005G128000 Sobic005G128000 Sobic008G099500--Sobic005G128000 Sobic008G099500--Sobic004G227500 Sobic004G289500 Sobic004G289500 Sobic008G099500--Sobic004G289500 Sobic008G099500--Sobic002G334600 Sobic001G116100 Sobic001G116100 Sobic008G099500--Sobic001G116100 Sobic006G066000 Sobic006G066000 Sobic008G099500--Sobic006G066000 Sobic006G213100 Sobic006G213100 Sobic003G328800--Sobic006G213100 Sobic005G012000 Sobic005G012000 Sobic003G328800--Sobic005G012000 Sobic004G164650 Sobic004G164650 Sobic003G328800--Sobic004G164650 Sobic003G397300 Sobic003G397300 Sobic003G328800--Sobic003G397300 Sobic008G126200 Sobic008G126200 Sobic003G328800--Sobic008G126200 Sobic003G328800--Sobic003G380500 Sobic001G082300 Sobic001G082300 Sobic003G328800--Sobic001G082300 Sobic008G136000 Sobic008G136000 Sobic003G328800--Sobic008G136000 Sobic003G044900 Sobic003G044900 Sobic003G328800--Sobic003G044900 Sobic004G349100--Sobic003G024800 Sobic001G350501 Sobic001G350501 Sobic004G349100--Sobic001G350501 Sobic004G349100--Sobic001G179000 Sobic004G349100--Sobic009G034400 Sobic001G309100 Sobic001G309100 Sobic004G349100--Sobic001G309100 Sobic003G101300 Sobic003G101300 Sobic004G349100--Sobic003G101300 Sobic003G437500 Sobic003G437500 Sobic004G349100--Sobic003G437500 Sobic005G000800 Sobic005G000800 Sobic004G349100--Sobic005G000800 Sobic004G349100--Sobic007G195400 Sobic001G281700--Sobic001G206000 Sobic001G281700--Sobic002G088700 Sobic001G149700 Sobic001G149700 Sobic001G281700--Sobic001G149700 Sobic001G281700--Sobic007G115900 Sobic010G071200 Sobic010G071200 Sobic001G281700--Sobic010G071200 Sobic010G055500 Sobic010G055500 Sobic001G281700--Sobic010G055500 Sobic006G257900 Sobic006G257900 Sobic001G281700--Sobic006G257900 Sobic009G032300 Sobic009G032300 Sobic001G281700--Sobic009G032300 Sobic006G254600 Sobic006G254600 Sobic001G281700--Sobic006G254600
Octagon: transcription factors


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