Gene annotation
Transcriptome id Sobic.009G064900.1
Synonym Sb09g005420
Functional annotation serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed
UniProt C5Z168
Pfam PF01603
Panther DB PTHR10257 PTHR10257:SF16
NCBI CDD -
KEGG Orthology K11584; serine/threonine-protein phosphatase 2A regulatory subunit B'
Gene Ontology GO:0007165; signal transduction GO:0000159protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT5G25510 : Protein phosphatase 2A regulatory B subunit family protein
RAP-DB (Rice) LOC_Os05g08560.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a043036 , Zm00025a023197
Brachypodium KQK07230
Barley HORVU1Hr1G025690.13 , HORVU1Hr1G025690.12 , HORVU1Hr1G025690.11 , HORVU1Hr1G025690.10 , HORVU1Hr1G025690.9 , HORVU1Hr1G025690.8 , HORVU1Hr1G025690.3 , HORVU1Hr1G025690.2 , HORVU1Hr1G025690.1 , HORVU1Hr1G025690.7 , HORVU1Hr1G025690.6 , HORVU1Hr1G025690.5 , HORVU1Hr1G025690.4
Wheat TraesCS3B02G140800 , TraesCS1B02G138000 , TraesCS1D02G119400 , TraesCS1A02G118300 , TraesCS1A02G118300 , TraesCS3D02G123500 , TraesCS3A02G121400
Populus -


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cDNA sequences
Sobic.009G064900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
2 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
3 Sobic.001G157100 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
4 Sobic.002G007200 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.001G372900 expressed protein K08819: cyclin-dependent kinase 12/13
6 Sobic.007G210900 expressed protein -
7 Sobic.008G086200 expressed protein -
8 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
9 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
10 Sobic.004G309800 remorin C-terminal domain containing protein, putative, expressed -
11 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
12 Sobic.001G369800 monocopper oxidase, putative, expressed -
13 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -
14 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
15 Sobic.001G435201 - -
16 Sobic.002G002100 expressed protein -
17 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
18 Sobic.003G077500 expressed protein -
19 Sobic.008G172200 CIN-like (ClassII) Subclade 12 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
20 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G064900 Sobic009G064900 Sobic001G113800 Sobic001G113800 Sobic009G064900--Sobic001G113800 Sobic001G487200 Sobic001G487200 Sobic009G064900--Sobic001G487200 Sobic001G157100 Sobic001G157100 Sobic009G064900--Sobic001G157100 Sobic002G007200 Sobic002G007200 Sobic009G064900--Sobic002G007200 Sobic001G372900 Sobic001G372900 Sobic009G064900--Sobic001G372900 Sobic007G210900 Sobic007G210900 Sobic009G064900--Sobic007G210900 Sobic008G086200 Sobic008G086200 Sobic009G064900--Sobic008G086200 Sobic010G046400 Sobic010G046400 Sobic009G064900--Sobic010G046400 Sobic003G174900 Sobic003G174900 Sobic009G064900--Sobic003G174900 Sobic001G113800--Sobic001G487200 Sobic003G360700 Sobic003G360700 Sobic001G113800--Sobic003G360700 Sobic001G231200 Sobic001G231200 Sobic001G113800--Sobic001G231200 Sobic003G230000 Sobic003G230000 Sobic001G113800--Sobic003G230000 Sobic010G135300 Sobic010G135300 Sobic001G113800--Sobic010G135300 Sobic002G370400 Sobic002G370400 Sobic001G113800--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic001G113800--Sobic002G002100 Sobic001G074000 Sobic001G074000 Sobic001G113800--Sobic001G074000 Sobic006G272500 Sobic006G272500 Sobic001G113800--Sobic006G272500 Sobic004G315700 Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic009G212100 Sobic009G212100 Sobic001G487200--Sobic009G212100 Sobic001G369800 Sobic001G369800 Sobic001G487200--Sobic001G369800 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G540700 Sobic001G540700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic001G157100--Sobic001G372900 Sobic001G296100 Sobic001G296100 Sobic001G157100--Sobic001G296100 Sobic003G077500 Sobic003G077500 Sobic001G157100--Sobic003G077500 Sobic001G157100--Sobic009G064900 Sobic001G157100--Sobic001G487200 Sobic001G047200 Sobic001G047200 Sobic001G157100--Sobic001G047200 Sobic006G167300 Sobic006G167300 Sobic001G157100--Sobic006G167300 Sobic001G499200 Sobic001G499200 Sobic001G157100--Sobic001G499200 Sobic001G157100--Sobic007G210900 Sobic006G262600 Sobic006G262600 Sobic002G007200--Sobic006G262600 Sobic003G380500 Sobic003G380500 Sobic002G007200--Sobic003G380500 Sobic009G164900 Sobic009G164900 Sobic002G007200--Sobic009G164900 Sobic006G133600 Sobic006G133600 Sobic002G007200--Sobic006G133600 Sobic002G334600 Sobic002G334600 Sobic002G007200--Sobic002G334600 Sobic002G007200--Sobic009G064900 Sobic002G367300 Sobic002G367300 Sobic002G007200--Sobic002G367300 Sobic004G287800 Sobic004G287800 Sobic002G007200--Sobic004G287800 Sobic004G205500 Sobic004G205500 Sobic002G007200--Sobic004G205500 Sobic001G372900--Sobic001G499200 Sobic001G372900--Sobic001G296100 Sobic001G372900--Sobic003G077500 Sobic006G081500 Sobic006G081500 Sobic001G372900--Sobic006G081500 Sobic001G372900--Sobic001G157100 Sobic006G084300 Sobic006G084300 Sobic001G372900--Sobic006G084300 Sobic001G372900--Sobic001G540700 Sobic008G172200 Sobic008G172200 Sobic001G372900--Sobic008G172200 Sobic001G372900--Sobic002G334600 Sobic003G420800 Sobic003G420800 Sobic007G210900--Sobic003G420800 Sobic004G154600 Sobic004G154600 Sobic007G210900--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic007G210900--Sobic004G199700 Sobic007G210900--Sobic002G002100 Sobic002G348700 Sobic002G348700 Sobic007G210900--Sobic002G348700 Sobic007G210900--Sobic004G205500 Sobic007G210900--Sobic006G167300 Sobic008G190500 Sobic008G190500 Sobic007G210900--Sobic008G190500 Sobic002G179700 Sobic002G179700 Sobic007G210900--Sobic002G179700 Sobic004G225700 Sobic004G225700 Sobic008G086200--Sobic004G225700 Sobic009G175200 Sobic009G175200 Sobic008G086200--Sobic009G175200 Sobic008G086200--Sobic003G174900 Sobic003G375000 Sobic003G375000 Sobic008G086200--Sobic003G375000 Sobic009G123500 Sobic009G123500 Sobic008G086200--Sobic009G123500 Sobic008G086200--Sobic008G190500 Sobic004G289500 Sobic004G289500 Sobic008G086200--Sobic004G289500 Sobic008G086200--Sobic009G164900 Sobic010G118700 Sobic010G118700 Sobic008G086200--Sobic010G118700 Sobic010G173900 Sobic010G173900 Sobic010G046400--Sobic010G173900 Sobic004G227500 Sobic004G227500 Sobic010G046400--Sobic004G227500 Sobic010G046400--Sobic002G334600 Sobic002G218700 Sobic002G218700 Sobic010G046400--Sobic002G218700 Sobic007G070300 Sobic007G070300 Sobic010G046400--Sobic007G070300 Sobic010G046400--Sobic002G367300 Sobic009G011500 Sobic009G011500 Sobic010G046400--Sobic009G011500 Sobic008G099500 Sobic008G099500 Sobic010G046400--Sobic008G099500 Sobic001G247200 Sobic001G247200 Sobic010G046400--Sobic001G247200 Sobic003G174900--Sobic004G199700 Sobic002G216600 Sobic002G216600 Sobic003G174900--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic003G174900--Sobic009G259500 Sobic001G361800 Sobic001G361800 Sobic003G174900--Sobic001G361800 Sobic001G258100 Sobic001G258100 Sobic003G174900--Sobic001G258100 Sobic005G204100 Sobic005G204100 Sobic003G174900--Sobic005G204100 Sobic003G174900--Sobic002G348700 Sobic003G174900--Sobic008G086200 Sobic003G174900--Sobic004G205500
Octagon: transcription factors


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