Gene annotation
Transcriptome id Sobic.008G172200.1
Synonym ATTCP24, Sb08g021690, TCP24, TCP-like gene;SbTCP18;SbTCP18
Functional annotation CIN-like (ClassII) Subclade 12 TCP (PubMedID : 21444336)
"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)." (PubMedID : 27917941)
"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)" (PubMedID : 28383054)
TCP family transcription factor, putative, expressed
UniProt C5YS27
Pfam PF03634
Panther DB PTHR31072 PTHR31072:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30210 : TEOSINTE BRANCHED 1, cycloidea, and PCF family 24
RAP-DB (Rice) LOC_Os12g42190.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a021020 , Zm00025a045028 , Zm00025a016162 , Zm00025a044209 , Zm00025a048886
Brachypodium KQJ83685 , KQK12863 , PNT62314 , PNT62313 , KQJ85770
Barley HORVU1Hr1G077080.1 , HORVU1Hr1G077080.2 , HORVU5Hr1G103400.1 , HORVU5Hr1G103400.3 , HORVU5Hr1G103400.2 , HORVU5Hr1G008340.1 , HORVU5Hr1G008340.2 , HORVU5Hr1G008340.4 , HORVU5Hr1G008340.5 , HORVU5Hr1G008340.6
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G372900 expressed protein K08819: cyclin-dependent kinase 12/13
2 Sobic.001G212600 a_IG002N01.7, putative, expressed -
3 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
4 Sobic.003G107900 phosphoesterase family protein, putative, expressed K01114: phospholipase C
5 Sobic.001G157100 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
6 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
7 Sobic.001G499200 PLAC8 family protein, expressed -
8 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
9 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
10 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
11 Sobic.005G177900 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
12 Sobic.001G425200 expressed protein -
13 Sobic.009G005700 FYVE zinc finger domain containing protein, expressed -
14 Sobic.001G540700 expressed protein -
15 Sobic.003G077500 expressed protein -
16 Sobic.001G369800 monocopper oxidase, putative, expressed -
17 Sobic.008G165200 OsFBX358 - F-box domain containing protein, expressed -
18 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
19 Sobic.004G189700 OsFBL33 - F-box domain and LRR containing protein, expressed -
20 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G172200 Sobic008G172200 Sobic001G372900 Sobic001G372900 Sobic008G172200--Sobic001G372900 Sobic001G212600 Sobic001G212600 Sobic008G172200--Sobic001G212600 Sobic003G351900 Sobic003G351900 Sobic008G172200--Sobic003G351900 Sobic003G107900 Sobic003G107900 Sobic008G172200--Sobic003G107900 Sobic001G157100 Sobic001G157100 Sobic008G172200--Sobic001G157100 Sobic002G334600 Sobic002G334600 Sobic008G172200--Sobic002G334600 Sobic001G499200 Sobic001G499200 Sobic008G172200--Sobic001G499200 Sobic009G064900 Sobic009G064900 Sobic008G172200--Sobic009G064900 Sobic002G223300 Sobic002G223300 Sobic008G172200--Sobic002G223300 Sobic001G372900--Sobic001G499200 Sobic001G296100 Sobic001G296100 Sobic001G372900--Sobic001G296100 Sobic003G077500 Sobic003G077500 Sobic001G372900--Sobic003G077500 Sobic006G081500 Sobic006G081500 Sobic001G372900--Sobic006G081500 Sobic001G372900--Sobic001G157100 Sobic006G084300 Sobic006G084300 Sobic001G372900--Sobic006G084300 Sobic001G540700 Sobic001G540700 Sobic001G372900--Sobic001G540700 Sobic001G372900--Sobic008G172200 Sobic001G372900--Sobic002G334600 Sobic001G212600--Sobic003G351900 Sobic003G411700 Sobic003G411700 Sobic001G212600--Sobic003G411700 Sobic008G165200 Sobic008G165200 Sobic001G212600--Sobic008G165200 Sobic001G369800 Sobic001G369800 Sobic001G212600--Sobic001G369800 Sobic001G296800 Sobic001G296800 Sobic001G212600--Sobic001G296800 Sobic010G222800 Sobic010G222800 Sobic001G212600--Sobic010G222800 Sobic001G487200 Sobic001G487200 Sobic001G212600--Sobic001G487200 Sobic005G062600 Sobic005G062600 Sobic001G212600--Sobic005G062600 Sobic002G006100 Sobic002G006100 Sobic001G212600--Sobic002G006100 Sobic006G142500 Sobic006G142500 Sobic003G351900--Sobic006G142500 Sobic001G079900 Sobic001G079900 Sobic003G351900--Sobic001G079900 Sobic003G351900--Sobic002G006100 Sobic002G027600 Sobic002G027600 Sobic003G351900--Sobic002G027600 Sobic003G153900 Sobic003G153900 Sobic003G351900--Sobic003G153900 Sobic003G351900--Sobic001G212600 Sobic005G032600 Sobic005G032600 Sobic003G351900--Sobic005G032600 Sobic004G164700 Sobic004G164700 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic001G268700 Sobic001G268700 Sobic003G107900--Sobic001G268700 Sobic003G107900--Sobic002G223300 Sobic003G244700 Sobic003G244700 Sobic003G107900--Sobic003G244700 Sobic003G107900--Sobic001G372900 Sobic010G013500 Sobic010G013500 Sobic003G107900--Sobic010G013500 Sobic003G107900--Sobic008G172200 Sobic002G341200 Sobic002G341200 Sobic003G107900--Sobic002G341200 Sobic004G189700 Sobic004G189700 Sobic003G107900--Sobic004G189700 Sobic006G073100 Sobic006G073100 Sobic003G107900--Sobic006G073100 Sobic001G157100--Sobic001G372900 Sobic001G157100--Sobic001G296100 Sobic001G157100--Sobic003G077500 Sobic001G157100--Sobic009G064900 Sobic001G157100--Sobic001G487200 Sobic001G047200 Sobic001G047200 Sobic001G157100--Sobic001G047200 Sobic006G167300 Sobic006G167300 Sobic001G157100--Sobic006G167300 Sobic001G157100--Sobic001G499200 Sobic007G210900 Sobic007G210900 Sobic001G157100--Sobic007G210900 Sobic002G334600--Sobic002G223300 Sobic009G030300 Sobic009G030300 Sobic002G334600--Sobic009G030300 Sobic007G139400 Sobic007G139400 Sobic002G334600--Sobic007G139400 Sobic007G188900 Sobic007G188900 Sobic002G334600--Sobic007G188900 Sobic003G132700 Sobic003G132700 Sobic002G334600--Sobic003G132700 Sobic002G089900 Sobic002G089900 Sobic002G334600--Sobic002G089900 Sobic003G354100 Sobic003G354100 Sobic002G334600--Sobic003G354100 Sobic009G044900 Sobic009G044900 Sobic002G334600--Sobic009G044900 Sobic002G157200 Sobic002G157200 Sobic002G334600--Sobic002G157200 Sobic001G499200--Sobic001G296100 Sobic001G499200--Sobic001G372900 Sobic001G499200--Sobic006G081500 Sobic004G315700 Sobic004G315700 Sobic001G499200--Sobic004G315700 Sobic008G048966 Sobic008G048966 Sobic001G499200--Sobic008G048966 Sobic001G499200--Sobic001G079900 Sobic009G124800 Sobic009G124800 Sobic001G499200--Sobic009G124800 Sobic001G019200 Sobic001G019200 Sobic001G499200--Sobic001G019200 Sobic001G499200--Sobic001G157100 Sobic001G113800 Sobic001G113800 Sobic009G064900--Sobic001G113800 Sobic009G064900--Sobic001G487200 Sobic009G064900--Sobic001G157100 Sobic002G007200 Sobic002G007200 Sobic009G064900--Sobic002G007200 Sobic009G064900--Sobic001G372900 Sobic009G064900--Sobic007G210900 Sobic008G086200 Sobic008G086200 Sobic009G064900--Sobic008G086200 Sobic010G046400 Sobic010G046400 Sobic009G064900--Sobic010G046400 Sobic003G174900 Sobic003G174900 Sobic009G064900--Sobic003G174900 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic002G223300--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800
Octagon: transcription factors


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